RNA–Protein interactions for RNA: ENST00000370900.5

IGSF1-202, Transcript of immunoglobulin superfamily member 1, humanhuman

TSL 2 BASIC

Gene IGSF1, Length 1,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGSF1-202ENST00000370900 NISCHQ9Y2I1 1504 aa27.88■■■□□ 2.05
IGSF1-202ENST00000370900 CCDC180Q9P1Z9 1646 aa24.52■■□□□ 1.52
IGSF1-202ENST00000370900 ABCC9O60706 1549 aa24.06■■□□□ 1.44
IGSF1-202ENST00000370900 DCAF8L2P0C7V8 631 aa23.42■■□□□ 1.34
IGSF1-202ENST00000370900 ZCCHC6Q5VYS8 1495 aaKnown RBP23.26■■□□□ 1.31
IGSF1-202ENST00000370900 NACADO15069 1562 aa23.07■■□□□ 1.28
IGSF1-202ENST00000370900 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
IGSF1-202ENST00000370900 DCAF1Q9Y4B6 1507 aa22.97■■□□□ 1.27
IGSF1-202ENST00000370900 MYO15BQ96JP2 1530 aa22.96■■□□□ 1.27
IGSF1-202ENST00000370900 PABPN1Q86U42 306 aaKnown RBP eCLIP22.63■■□□□ 1.21
IGSF1-202ENST00000370900 SCRIBQ14160 1630 aa22.59■■□□□ 1.21
IGSF1-202ENST00000370900 UNC13AQ9UPW8 1703 aa22.55■■□□□ 1.2
IGSF1-202ENST00000370900 BICRAQ9NZM4 1560 aa22.45■■□□□ 1.18
IGSF1-202ENST00000370900 SHROOM4Q9ULL8 1493 aa22.37■■□□□ 1.17
IGSF1-202ENST00000370900 DNAJC5BQ9UF47 199 aa22.02■■□□□ 1.12
IGSF1-202ENST00000370900 EIF4G1Q04637 1599 aaKnown RBP21.82■■□□□ 1.08
IGSF1-202ENST00000370900 CECR2Q9BXF3 1484 aa21.81■■□□□ 1.08
IGSF1-202ENST00000370900 CC2D2AQ9P2K1 1620 aa21.69■■□□□ 1.06
IGSF1-202ENST00000370900 MROH2BQ7Z745 1585 aa21.56■■□□□ 1.04
IGSF1-202ENST00000370900 SMARCA4P51532 1647 aa21.56■■□□□ 1.04
IGSF1-202ENST00000370900 BAZ1AQ9NRL2 1556 aaPredicted RBP21.54■■□□□ 1.04
IGSF1-202ENST00000370900 ATAD2BQ9ULI0 1458 aa21.45■■□□□ 1.02
IGSF1-202ENST00000370900 RSF1Q96T23 1441 aaPredicted RBP21.4■■□□□ 1.02
IGSF1-202ENST00000370900 NCAPD3P42695 1498 aa21.36■■□□□ 1.01
IGSF1-202ENST00000370900 SMARCA2P51531 1590 aa21.33■■□□□ 1
IGSF1-202ENST00000370900 WIZO95785 1651 aa21.31■■□□□ 1
IGSF1-202ENST00000370900 PEG3Q9GZU2 1588 aa21.29■■□□□ 1
IGSF1-202ENST00000370900 BAZ1BQ9UIG0 1483 aaKnown RBP21.25■□□□□ 0.99
IGSF1-202ENST00000370900 HMGXB3Q12766 1538 aa21.21■□□□□ 0.99
IGSF1-202ENST00000370900 AEBP2Q6ZN18 517 aaPredicted RBP21.15■□□□□ 0.98
IGSF1-202ENST00000370900 SUPT5HO00267 1087 aaKnown RBP21.13■□□□□ 0.97
IGSF1-202ENST00000370900 TOP2AP11388 1531 aaKnown RBP21.03■□□□□ 0.96
IGSF1-202ENST00000370900 NESP48681 1621 aa20.91■□□□□ 0.94
IGSF1-202ENST00000370900 CCDC88BA6NC98 1476 aa20.87■□□□□ 0.93
IGSF1-202ENST00000370900 CADPSQ9ULU8 1353 aa20.79■□□□□ 0.92
IGSF1-202ENST00000370900 LAMC3Q9Y6N6 1575 aa20.7■□□□□ 0.9
IGSF1-202ENST00000370900 CFTRP13569 1480 aa20.69■□□□□ 0.9
IGSF1-202ENST00000370900 ERCC6Q03468 1493 aa20.65■□□□□ 0.9
IGSF1-202ENST00000370900 PDS5BQ9NTI5 1447 aa20.6■□□□□ 0.89
IGSF1-202ENST00000370900 FANCD2Q9BXW9 1451 aa20.55■□□□□ 0.88
IGSF1-202ENST00000370900 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
IGSF1-202ENST00000370900 KIF21AQ7Z4S6 1674 aa20.53■□□□□ 0.88
IGSF1-202ENST00000370900 CEP164Q9UPV0 1460 aa20.47■□□□□ 0.87
IGSF1-202ENST00000370900 THOC2Q8NI27 1593 aaKnown RBP20.4■□□□□ 0.86
IGSF1-202ENST00000370900 MRC2Q9UBG0 1479 aa20.39■□□□□ 0.85
IGSF1-202ENST00000370900 PRDM2Q13029 1718 aa20.36■□□□□ 0.85
IGSF1-202ENST00000370900 URB2Q14146 1524 aaKnown RBP20.35■□□□□ 0.85
IGSF1-202ENST00000370900 WDR62O43379 1518 aa20.3■□□□□ 0.84
IGSF1-202ENST00000370900 CUX2O14529 1486 aa20.27■□□□□ 0.83
IGSF1-202ENST00000370900 TOPBP1Q92547 1522 aa20.23■□□□□ 0.83
IGSF1-202ENST00000370900 ABCC8Q09428 1581 aa20.21■□□□□ 0.83
IGSF1-202ENST00000370900 CUX1P39880 1505 aa20.19■□□□□ 0.82
IGSF1-202ENST00000370900 DNMBPQ6XZF7 1577 aa20.17■□□□□ 0.82
IGSF1-202ENST00000370900 WRNQ14191 1432 aaPredicted RBP eCLIP20.12■□□□□ 0.81
IGSF1-202ENST00000370900 POLA1P09884 1462 aaPredicted RBP20.1■□□□□ 0.81
IGSF1-202ENST00000370900 FGD5Q6ZNL6 1462 aa20.08■□□□□ 0.81
IGSF1-202ENST00000370900 RAD54L2Q9Y4B4 1467 aa20.08■□□□□ 0.81
IGSF1-202ENST00000370900 SYNJ1O43426 1573 aa20.07■□□□□ 0.8
IGSF1-202ENST00000370900 ZNF608Q9ULD9 1512 aaPredicted RBP20.03■□□□□ 0.8
IGSF1-202ENST00000370900 SOGA1O94964 1423 aa20.03■□□□□ 0.8
IGSF1-202ENST00000370900 IFT140Q96RY7 1462 aa20.01■□□□□ 0.79
IGSF1-202ENST00000370900 TOP2BQ02880 1626 aa20■□□□□ 0.79
IGSF1-202ENST00000370900 TARBP1Q13395 1621 aaKnown RBP19.97■□□□□ 0.79
IGSF1-202ENST00000370900 TDRD9Q8NDG6 1382 aaKnown RBP19.96■□□□□ 0.79
IGSF1-202ENST00000370900 BIVM-ERCC5R4GMW8 1640 aa19.95■□□□□ 0.78
IGSF1-202ENST00000370900 AQRO60306 1485 aaKnown RBP eCLIP19.95■□□□□ 0.78
IGSF1-202ENST00000370900 TRIM41Q8WV44 630 aa19.86■□□□□ 0.77
IGSF1-202ENST00000370900 ABCA10Q8WWZ4 1543 aa19.85■□□□□ 0.77
IGSF1-202ENST00000370900 EIF4G3O43432 1585 aaKnown RBP19.85■□□□□ 0.77
IGSF1-202ENST00000370900 WDR97A6NE52 1622 aa19.79■□□□□ 0.76
IGSF1-202ENST00000370900 GAPVD1Q14C86 1478 aa19.78■□□□□ 0.76
IGSF1-202ENST00000370900 ABCA5Q8WWZ7 1642 aa19.73■□□□□ 0.75
IGSF1-202ENST00000370900 GRIN2BQ13224 1484 aa19.71■□□□□ 0.75
IGSF1-202ENST00000370900 SNAPC4Q5SXM2 1469 aa19.71■□□□□ 0.75
IGSF1-202ENST00000370900 FBLN2P98095 1184 aa19.7■□□□□ 0.74
IGSF1-202ENST00000370900 RUSC2Q8N2Y8 1516 aa19.7■□□□□ 0.74
IGSF1-202ENST00000370900 KIF27Q86VH2 1401 aa19.67■□□□□ 0.74
IGSF1-202ENST00000370900 IGF1RP08069 1367 aa19.63■□□□□ 0.73
IGSF1-202ENST00000370900 PBRM1Q86U86 1689 aa19.62■□□□□ 0.73
IGSF1-202ENST00000370900 CHMP7Q8WUX9 453 aaPredicted RBP19.62■□□□□ 0.73
IGSF1-202ENST00000370900 MAGI1Q96QZ7 1491 aaPredicted RBP19.61■□□□□ 0.73
IGSF1-202ENST00000370900 OSCARQ8IYS5 282 aa19.59■□□□□ 0.73
IGSF1-202ENST00000370900 FAM9AQ8IZU1 332 aaPredicted RBP19.57■□□□□ 0.72
IGSF1-202ENST00000370900 ERICH3Q5RHP9 1530 aa19.57■□□□□ 0.72
IGSF1-202ENST00000370900 SYNJ2O15056 1496 aa19.56■□□□□ 0.72
IGSF1-202ENST00000370900 DNAJC5Q9H3Z4 198 aa19.54■□□□□ 0.72
IGSF1-202ENST00000370900 CHD1O14646 1710 aa19.53■□□□□ 0.72
IGSF1-202ENST00000370900 ADAMTS12P58397 1594 aa19.53■□□□□ 0.72
IGSF1-202ENST00000370900 FHAD1B1AJZ9 1412 aa19.53■□□□□ 0.72
IGSF1-202ENST00000370900 CARMIL1Q5VZK9 1371 aa19.5■□□□□ 0.71
IGSF1-202ENST00000370900 GRIN2AQ12879 1464 aa19.48■□□□□ 0.71
IGSF1-202ENST00000370900 CSRNP3Q8WYN3 585 aa19.44■□□□□ 0.7
IGSF1-202ENST00000370900 EHMT2Q96KQ7 1210 aa19.39■□□□□ 0.7
IGSF1-202ENST00000370900 CEP170Q5SW79 1584 aa19.39■□□□□ 0.7
IGSF1-202ENST00000370900 CUL7Q14999 1698 aa19.39■□□□□ 0.69
IGSF1-202ENST00000370900 NUP160Q12769 1436 aa19.38■□□□□ 0.69
IGSF1-202ENST00000370900 PRXQ9BXM0 1461 aa19.36■□□□□ 0.69
IGSF1-202ENST00000370900 RAPGEF2Q9Y4G8 1499 aa19.35■□□□□ 0.69
IGSF1-202ENST00000370900 EEA1Q15075 1411 aa19.35■□□□□ 0.69
IGSF1-202ENST00000370900 CLASP1Q7Z460 1538 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms