RNA–Protein interactions for RNA: ENST00000370648.3

BRS3-201, Transcript of bombesin receptor subtype 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRS3, Length 2,833 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRS3-201ENST00000370648 NISCHQ9Y2I1 1504 aa17.77■□□□□ 0.44
BRS3-201ENST00000370648 CCDC180Q9P1Z9 1646 aa15.63■□□□□ 0.09
BRS3-201ENST00000370648 ABCC9O60706 1549 aa15.27■□□□□ 0.04
BRS3-201ENST00000370648 DCAF8L2P0C7V8 631 aa14.95□□□□□ -0.02
BRS3-201ENST00000370648 ZCCHC6Q5VYS8 1495 aaKnown RBP14.85□□□□□ -0.03
BRS3-201ENST00000370648 RB1CC1Q8TDY2 1594 aa14.63□□□□□ -0.07
BRS3-201ENST00000370648 NACADO15069 1562 aa14.63□□□□□ -0.07
BRS3-201ENST00000370648 DCAF1Q9Y4B6 1507 aa14.58□□□□□ -0.08
BRS3-201ENST00000370648 MYO15BQ96JP2 1530 aa14.52□□□□□ -0.09
BRS3-201ENST00000370648 SCRIBQ14160 1630 aa14.48□□□□□ -0.09
BRS3-201ENST00000370648 UNC13AQ9UPW8 1703 aa14.44□□□□□ -0.1
BRS3-201ENST00000370648 SHROOM4Q9ULL8 1493 aa14.43□□□□□ -0.1
BRS3-201ENST00000370648 PABPN1Q86U42 306 aaKnown RBP eCLIP14.35□□□□□ -0.11
BRS3-201ENST00000370648 BICRAQ9NZM4 1560 aa14.26□□□□□ -0.13
BRS3-201ENST00000370648 CECR2Q9BXF3 1484 aa13.93□□□□□ -0.18
BRS3-201ENST00000370648 EIF4G1Q04637 1599 aaKnown RBP13.86□□□□□ -0.19
BRS3-201ENST00000370648 DNAJC5BQ9UF47 199 aa13.84□□□□□ -0.19
BRS3-201ENST00000370648 MROH2BQ7Z745 1585 aa13.78□□□□□ -0.2
BRS3-201ENST00000370648 SMARCA4P51532 1647 aa13.77□□□□□ -0.2
BRS3-201ENST00000370648 CC2D2AQ9P2K1 1620 aa13.77□□□□□ -0.2
BRS3-201ENST00000370648 BAZ1AQ9NRL2 1556 aaPredicted RBP13.74□□□□□ -0.21
BRS3-201ENST00000370648 WIZO95785 1651 aa13.68□□□□□ -0.22
BRS3-201ENST00000370648 RSF1Q96T23 1441 aaPredicted RBP13.67□□□□□ -0.22
BRS3-201ENST00000370648 SUPT5HO00267 1087 aaKnown RBP13.64□□□□□ -0.23
BRS3-201ENST00000370648 ATAD2BQ9ULI0 1458 aa13.62□□□□□ -0.23
BRS3-201ENST00000370648 SMARCA2P51531 1590 aa13.56□□□□□ -0.24
BRS3-201ENST00000370648 BAZ1BQ9UIG0 1483 aaKnown RBP13.54□□□□□ -0.24
BRS3-201ENST00000370648 PEG3Q9GZU2 1588 aa13.54□□□□□ -0.24
BRS3-201ENST00000370648 NCAPD3P42695 1498 aa13.51□□□□□ -0.25
BRS3-201ENST00000370648 HMGXB3Q12766 1538 aa13.47□□□□□ -0.25
BRS3-201ENST00000370648 TOP2AP11388 1531 aaKnown RBP13.43□□□□□ -0.26
BRS3-201ENST00000370648 CCDC88BA6NC98 1476 aa13.32□□□□□ -0.28
BRS3-201ENST00000370648 NESP48681 1621 aa13.31□□□□□ -0.28
BRS3-201ENST00000370648 CADPSQ9ULU8 1353 aa13.17□□□□□ -0.3
BRS3-201ENST00000370648 CFTRP13569 1480 aa13.14□□□□□ -0.31
BRS3-201ENST00000370648 LAMC3Q9Y6N6 1575 aa13.13□□□□□ -0.31
BRS3-201ENST00000370648 KIF21AQ7Z4S6 1674 aa13.13□□□□□ -0.31
BRS3-201ENST00000370648 ERCC6Q03468 1493 aa13.1□□□□□ -0.31
BRS3-201ENST00000370648 PRDM2Q13029 1718 aa13.07□□□□□ -0.32
BRS3-201ENST00000370648 FANCD2Q9BXW9 1451 aa13.07□□□□□ -0.32
BRS3-201ENST00000370648 PDS5BQ9NTI5 1447 aa13.03□□□□□ -0.32
BRS3-201ENST00000370648 ABCC8Q09428 1581 aa13.02□□□□□ -0.32
BRS3-201ENST00000370648 CEP164Q9UPV0 1460 aa13.01□□□□□ -0.33
BRS3-201ENST00000370648 THOC2Q8NI27 1593 aaKnown RBP12.96□□□□□ -0.33
BRS3-201ENST00000370648 URB2Q14146 1524 aaKnown RBP12.95□□□□□ -0.34
BRS3-201ENST00000370648 MRC2Q9UBG0 1479 aa12.92□□□□□ -0.34
BRS3-201ENST00000370648 CUX1P39880 1505 aa12.9□□□□□ -0.34
BRS3-201ENST00000370648 SYNJ1O43426 1573 aa12.89□□□□□ -0.35
BRS3-201ENST00000370648 TOPBP1Q92547 1522 aa12.88□□□□□ -0.35
BRS3-201ENST00000370648 WRNQ14191 1432 aaPredicted RBP eCLIP12.87□□□□□ -0.35
BRS3-201ENST00000370648 WDR62O43379 1518 aa12.87□□□□□ -0.35
BRS3-201ENST00000370648 DNMBPQ6XZF7 1577 aa12.85□□□□□ -0.35
BRS3-201ENST00000370648 FGD5Q6ZNL6 1462 aa12.82□□□□□ -0.36
BRS3-201ENST00000370648 POLA1P09884 1462 aaPredicted RBP12.8□□□□□ -0.36
BRS3-201ENST00000370648 RAD54L2Q9Y4B4 1467 aa12.8□□□□□ -0.36
BRS3-201ENST00000370648 TOP2BQ02880 1626 aa12.8□□□□□ -0.36
BRS3-201ENST00000370648 CUX2O14529 1486 aa12.79□□□□□ -0.36
BRS3-201ENST00000370648 BIVM-ERCC5R4GMW8 1640 aa12.79□□□□□ -0.36
BRS3-201ENST00000370648 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
BRS3-201ENST00000370648 CHIC1Q5VXU3 224 aa12.76□□□□□ -0.37
BRS3-201ENST00000370648 ZNF608Q9ULD9 1512 aaPredicted RBP12.74□□□□□ -0.37
BRS3-201ENST00000370648 SOGA1O94964 1423 aa12.72□□□□□ -0.37
BRS3-201ENST00000370648 TARBP1Q13395 1621 aaKnown RBP12.72□□□□□ -0.37
BRS3-201ENST00000370648 TDRD9Q8NDG6 1382 aaKnown RBP12.71□□□□□ -0.37
BRS3-201ENST00000370648 AQRO60306 1485 aaKnown RBP eCLIP12.69□□□□□ -0.38
BRS3-201ENST00000370648 IFT140Q96RY7 1462 aa12.68□□□□□ -0.38
BRS3-201ENST00000370648 WDR97A6NE52 1622 aa12.67□□□□□ -0.38
BRS3-201ENST00000370648 EIF4G3O43432 1585 aaKnown RBP12.67□□□□□ -0.38
BRS3-201ENST00000370648 RUSC2Q8N2Y8 1516 aa12.66□□□□□ -0.38
BRS3-201ENST00000370648 FAM9AQ8IZU1 332 aaPredicted RBP12.65□□□□□ -0.38
BRS3-201ENST00000370648 ABCA10Q8WWZ4 1543 aa12.63□□□□□ -0.39
BRS3-201ENST00000370648 ABCA5Q8WWZ7 1642 aa12.6□□□□□ -0.39
BRS3-201ENST00000370648 EHMT2Q96KQ7 1210 aa12.6□□□□□ -0.39
BRS3-201ENST00000370648 GAPVD1Q14C86 1478 aa12.59□□□□□ -0.39
BRS3-201ENST00000370648 PBRM1Q86U86 1689 aa12.58□□□□□ -0.39
BRS3-201ENST00000370648 FBLN2P98095 1184 aa12.55□□□□□ -0.4
BRS3-201ENST00000370648 KIF27Q86VH2 1401 aa12.55□□□□□ -0.4
BRS3-201ENST00000370648 SNAPC4Q5SXM2 1469 aa12.55□□□□□ -0.4
BRS3-201ENST00000370648 GRIN2BQ13224 1484 aa12.52□□□□□ -0.41
BRS3-201ENST00000370648 CHD1O14646 1710 aa12.49□□□□□ -0.41
BRS3-201ENST00000370648 IGF1RP08069 1367 aa12.49□□□□□ -0.41
BRS3-201ENST00000370648 ADAMTS12P58397 1594 aa12.47□□□□□ -0.41
BRS3-201ENST00000370648 ERICH3Q5RHP9 1530 aa12.46□□□□□ -0.41
BRS3-201ENST00000370648 CHMP7Q8WUX9 453 aaPredicted RBP12.44□□□□□ -0.42
BRS3-201ENST00000370648 MAGI1Q96QZ7 1491 aaPredicted RBP12.44□□□□□ -0.42
BRS3-201ENST00000370648 CSRNP3Q8WYN3 585 aa12.43□□□□□ -0.42
BRS3-201ENST00000370648 SYNJ2O15056 1496 aa12.42□□□□□ -0.42
BRS3-201ENST00000370648 CARMIL1Q5VZK9 1371 aa12.42□□□□□ -0.42
BRS3-201ENST00000370648 CUL7Q14999 1698 aa12.41□□□□□ -0.42
BRS3-201ENST00000370648 RAPGEF2Q9Y4G8 1499 aa12.4□□□□□ -0.42
BRS3-201ENST00000370648 FHAD1B1AJZ9 1412 aa12.4□□□□□ -0.42
BRS3-201ENST00000370648 GRIN2AQ12879 1464 aa12.4□□□□□ -0.42
BRS3-201ENST00000370648 RANGAP1P46060 587 aaPredicted RBP12.38□□□□□ -0.43
BRS3-201ENST00000370648 CEP170Q5SW79 1584 aa12.37□□□□□ -0.43
BRS3-201ENST00000370648 EEA1Q15075 1411 aa12.37□□□□□ -0.43
BRS3-201ENST00000370648 PRXQ9BXM0 1461 aa12.37□□□□□ -0.43
BRS3-201ENST00000370648 LOC105371045A0A1W2PR82 267 aa12.36□□□□□ -0.43
BRS3-201ENST00000370648 OSCARQ8IYS5 282 aa12.32□□□□□ -0.44
BRS3-201ENST00000370648 KIF21BO75037 1637 aa12.32□□□□□ -0.44
BRS3-201ENST00000370648 UBTFP17480 764 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms