RNA–Protein interactions for RNA: ENST00000369220.8

CCNC-203, Transcript of cyclin C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCNC, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-203ENST00000369220 NISCHQ9Y2I1 1504 aa24.76■■□□□ 1.55
CCNC-203ENST00000369220 CCDC180Q9P1Z9 1646 aa21.84■■□□□ 1.09
CCNC-203ENST00000369220 ABCC9O60706 1549 aa21.34■■□□□ 1.01
CCNC-203ENST00000369220 DCAF8L2P0C7V8 631 aa20.7■□□□□ 0.9
CCNC-203ENST00000369220 ZCCHC6Q5VYS8 1495 aaKnown RBP20.68■□□□□ 0.9
CCNC-203ENST00000369220 NACADO15069 1562 aa20.51■□□□□ 0.87
CCNC-203ENST00000369220 RB1CC1Q8TDY2 1594 aa20.5■□□□□ 0.87
CCNC-203ENST00000369220 MYO15BQ96JP2 1530 aa20.43■□□□□ 0.86
CCNC-203ENST00000369220 DCAF1Q9Y4B6 1507 aa20.42■□□□□ 0.86
CCNC-203ENST00000369220 UNC13AQ9UPW8 1703 aa20.09■□□□□ 0.81
CCNC-203ENST00000369220 SCRIBQ14160 1630 aa20.07■□□□□ 0.8
CCNC-203ENST00000369220 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
CCNC-203ENST00000369220 BICRAQ9NZM4 1560 aa19.94■□□□□ 0.78
CCNC-203ENST00000369220 SHROOM4Q9ULL8 1493 aa19.81■□□□□ 0.76
CCNC-203ENST00000369220 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
CCNC-203ENST00000369220 EIF4G1Q04637 1599 aaKnown RBP19.39■□□□□ 0.7
CCNC-203ENST00000369220 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
CCNC-203ENST00000369220 CC2D2AQ9P2K1 1620 aa19.27■□□□□ 0.68
CCNC-203ENST00000369220 SMARCA4P51532 1647 aa19.17■□□□□ 0.66
CCNC-203ENST00000369220 BAZ1AQ9NRL2 1556 aaPredicted RBP19.16■□□□□ 0.66
CCNC-203ENST00000369220 MROH2BQ7Z745 1585 aa19.14■□□□□ 0.65
CCNC-203ENST00000369220 ATAD2BQ9ULI0 1458 aa19.03■□□□□ 0.64
CCNC-203ENST00000369220 RSF1Q96T23 1441 aaPredicted RBP18.98■□□□□ 0.63
CCNC-203ENST00000369220 SMARCA2P51531 1590 aa18.96■□□□□ 0.63
CCNC-203ENST00000369220 NCAPD3P42695 1498 aa18.96■□□□□ 0.63
CCNC-203ENST00000369220 PEG3Q9GZU2 1588 aa18.95■□□□□ 0.62
CCNC-203ENST00000369220 WIZO95785 1651 aa18.93■□□□□ 0.62
CCNC-203ENST00000369220 BAZ1BQ9UIG0 1483 aaKnown RBP18.88■□□□□ 0.61
CCNC-203ENST00000369220 HMGXB3Q12766 1538 aa18.87■□□□□ 0.61
CCNC-203ENST00000369220 SUPT5HO00267 1087 aaKnown RBP18.7■□□□□ 0.58
CCNC-203ENST00000369220 TOP2AP11388 1531 aaKnown RBP18.69■□□□□ 0.58
CCNC-203ENST00000369220 NESP48681 1621 aa18.55■□□□□ 0.56
CCNC-203ENST00000369220 CCDC88BA6NC98 1476 aa18.51■□□□□ 0.55
CCNC-203ENST00000369220 CADPSQ9ULU8 1353 aa18.43■□□□□ 0.54
CCNC-203ENST00000369220 LAMC3Q9Y6N6 1575 aa18.41■□□□□ 0.54
CCNC-203ENST00000369220 CFTRP13569 1480 aa18.37■□□□□ 0.53
CCNC-203ENST00000369220 ERCC6Q03468 1493 aa18.33■□□□□ 0.52
CCNC-203ENST00000369220 PDS5BQ9NTI5 1447 aa18.28■□□□□ 0.52
CCNC-203ENST00000369220 KIF21AQ7Z4S6 1674 aa18.27■□□□□ 0.52
CCNC-203ENST00000369220 FANCD2Q9BXW9 1451 aa18.24■□□□□ 0.51
CCNC-203ENST00000369220 CEP164Q9UPV0 1460 aa18.18■□□□□ 0.5
CCNC-203ENST00000369220 PRDM2Q13029 1718 aa18.17■□□□□ 0.5
CCNC-203ENST00000369220 THOC2Q8NI27 1593 aaKnown RBP18.15■□□□□ 0.5
CCNC-203ENST00000369220 MRC2Q9UBG0 1479 aa18.1■□□□□ 0.49
CCNC-203ENST00000369220 URB2Q14146 1524 aaKnown RBP18.07■□□□□ 0.48
CCNC-203ENST00000369220 WDR62O43379 1518 aa18.04■□□□□ 0.48
CCNC-203ENST00000369220 CUX2O14529 1486 aa18■□□□□ 0.47
CCNC-203ENST00000369220 TOPBP1Q92547 1522 aa17.97■□□□□ 0.47
CCNC-203ENST00000369220 ABCC8Q09428 1581 aa17.95■□□□□ 0.46
CCNC-203ENST00000369220 CUX1P39880 1505 aa17.93■□□□□ 0.46
CCNC-203ENST00000369220 DNMBPQ6XZF7 1577 aa17.93■□□□□ 0.46
CCNC-203ENST00000369220 WRNQ14191 1432 aaPredicted RBP eCLIP17.87■□□□□ 0.45
CCNC-203ENST00000369220 POLA1P09884 1462 aaPredicted RBP17.85■□□□□ 0.45
CCNC-203ENST00000369220 SYNJ1O43426 1573 aa17.85■□□□□ 0.45
CCNC-203ENST00000369220 FGD5Q6ZNL6 1462 aa17.83■□□□□ 0.45
CCNC-203ENST00000369220 RAD54L2Q9Y4B4 1467 aa17.8■□□□□ 0.44
CCNC-203ENST00000369220 TOP2BQ02880 1626 aa17.79■□□□□ 0.44
CCNC-203ENST00000369220 IFT140Q96RY7 1462 aa17.77■□□□□ 0.44
CCNC-203ENST00000369220 ZNF608Q9ULD9 1512 aaPredicted RBP17.77■□□□□ 0.43
CCNC-203ENST00000369220 BIVM-ERCC5R4GMW8 1640 aa17.76■□□□□ 0.43
CCNC-203ENST00000369220 SOGA1O94964 1423 aa17.75■□□□□ 0.43
CCNC-203ENST00000369220 TARBP1Q13395 1621 aaKnown RBP17.75■□□□□ 0.43
CCNC-203ENST00000369220 TDRD9Q8NDG6 1382 aaKnown RBP17.69■□□□□ 0.42
CCNC-203ENST00000369220 AQRO60306 1485 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCNC-203ENST00000369220 EIF4G3O43432 1585 aaKnown RBP17.66■□□□□ 0.42
CCNC-203ENST00000369220 WDR97A6NE52 1622 aa17.64■□□□□ 0.41
CCNC-203ENST00000369220 ABCA10Q8WWZ4 1543 aa17.63■□□□□ 0.41
CCNC-203ENST00000369220 TRIM41Q8WV44 630 aa17.59■□□□□ 0.41
CCNC-203ENST00000369220 ABCA5Q8WWZ7 1642 aa17.56■□□□□ 0.4
CCNC-203ENST00000369220 GAPVD1Q14C86 1478 aa17.55■□□□□ 0.4
CCNC-203ENST00000369220 CHIC1Q5VXU3 224 aa17.53■□□□□ 0.4
CCNC-203ENST00000369220 GRIN2BQ13224 1484 aa17.5■□□□□ 0.39
CCNC-203ENST00000369220 SNAPC4Q5SXM2 1469 aa17.5■□□□□ 0.39
CCNC-203ENST00000369220 PBRM1Q86U86 1689 aa17.48■□□□□ 0.39
CCNC-203ENST00000369220 RUSC2Q8N2Y8 1516 aa17.46■□□□□ 0.39
CCNC-203ENST00000369220 KIF27Q86VH2 1401 aa17.45■□□□□ 0.38
CCNC-203ENST00000369220 FBLN2P98095 1184 aa17.44■□□□□ 0.38
CCNC-203ENST00000369220 MAGI1Q96QZ7 1491 aaPredicted RBP17.43■□□□□ 0.38
CCNC-203ENST00000369220 ERICH3Q5RHP9 1530 aa17.4■□□□□ 0.38
CCNC-203ENST00000369220 IGF1RP08069 1367 aa17.39■□□□□ 0.37
CCNC-203ENST00000369220 CHD1O14646 1710 aa17.38■□□□□ 0.37
CCNC-203ENST00000369220 SYNJ2O15056 1496 aa17.37■□□□□ 0.37
CCNC-203ENST00000369220 ADAMTS12P58397 1594 aa17.37■□□□□ 0.37
CCNC-203ENST00000369220 CHMP7Q8WUX9 453 aaPredicted RBP17.37■□□□□ 0.37
CCNC-203ENST00000369220 FHAD1B1AJZ9 1412 aa17.33■□□□□ 0.37
CCNC-203ENST00000369220 OSCARQ8IYS5 282 aa17.33■□□□□ 0.37
CCNC-203ENST00000369220 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
CCNC-203ENST00000369220 FAM9AQ8IZU1 332 aaPredicted RBP17.3■□□□□ 0.36
CCNC-203ENST00000369220 DNAJC5Q9H3Z4 198 aa17.28■□□□□ 0.36
CCNC-203ENST00000369220 CARMIL1Q5VZK9 1371 aa17.28■□□□□ 0.36
CCNC-203ENST00000369220 CUL7Q14999 1698 aa17.26■□□□□ 0.35
CCNC-203ENST00000369220 CEP170Q5SW79 1584 aa17.23■□□□□ 0.35
CCNC-203ENST00000369220 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.35
CCNC-203ENST00000369220 NUP160Q12769 1436 aa17.21■□□□□ 0.34
CCNC-203ENST00000369220 PRXQ9BXM0 1461 aa17.19■□□□□ 0.34
CCNC-203ENST00000369220 CLASP1Q7Z460 1538 aa17.19■□□□□ 0.34
CCNC-203ENST00000369220 EEA1Q15075 1411 aa17.19■□□□□ 0.34
CCNC-203ENST00000369220 RAPGEF2Q9Y4G8 1499 aa17.18■□□□□ 0.34
CCNC-203ENST00000369220 EHMT2Q96KQ7 1210 aa17.13■□□□□ 0.33
CCNC-203ENST00000369220 ARHGEF11O15085 1522 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms