RNA–Protein interactions for RNA: ENST00000368323.7

RIT1-202, Transcript of Ras like without CAAX 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIT1, Length 3,445 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIT1-202ENST00000368323 NISCHQ9Y2I1 1504 aa22.92■■□□□ 1.26
RIT1-202ENST00000368323 DCAF8L2P0C7V8 631 aa20.01■□□□□ 0.79
RIT1-202ENST00000368323 SHROOM4Q9ULL8 1493 aa19.83■□□□□ 0.76
RIT1-202ENST00000368323 CCDC180Q9P1Z9 1646 aa19.4■□□□□ 0.7
RIT1-202ENST00000368323 SUPT5HO00267 1087 aaKnown RBP19.26■□□□□ 0.67
RIT1-202ENST00000368323 ZCCHC6Q5VYS8 1495 aaKnown RBP19.21■□□□□ 0.67
RIT1-202ENST00000368323 ABCC9O60706 1549 aa19.06■□□□□ 0.64
RIT1-202ENST00000368323 SCRIBQ14160 1630 aa18.56■□□□□ 0.56
RIT1-202ENST00000368323 DCAF1Q9Y4B6 1507 aa18.52■□□□□ 0.55
RIT1-202ENST00000368323 PABPN1Q86U42 306 aaKnown RBP eCLIP18.35■□□□□ 0.53
RIT1-202ENST00000368323 NACADO15069 1562 aa18.23■□□□□ 0.51
RIT1-202ENST00000368323 CHIC1Q5VXU3 224 aa18.18■□□□□ 0.5
RIT1-202ENST00000368323 CECR2Q9BXF3 1484 aa18.13■□□□□ 0.49
RIT1-202ENST00000368323 RB1CC1Q8TDY2 1594 aa18.11■□□□□ 0.49
RIT1-202ENST00000368323 MYO15BQ96JP2 1530 aa18.11■□□□□ 0.49
RIT1-202ENST00000368323 RSF1Q96T23 1441 aaPredicted RBP18.07■□□□□ 0.48
RIT1-202ENST00000368323 EHMT2Q96KQ7 1210 aa18.02■□□□□ 0.47
RIT1-202ENST00000368323 FAM9AQ8IZU1 332 aaPredicted RBP17.92■□□□□ 0.46
RIT1-202ENST00000368323 MROH2BQ7Z745 1585 aa17.91■□□□□ 0.46
RIT1-202ENST00000368323 LOC105371045A0A1W2PR82 267 aa17.87■□□□□ 0.45
RIT1-202ENST00000368323 TRIM41Q8WV44 630 aa17.81■□□□□ 0.44
RIT1-202ENST00000368323 WIZO95785 1651 aa17.76■□□□□ 0.43
RIT1-202ENST00000368323 UNC13AQ9UPW8 1703 aa17.7■□□□□ 0.42
RIT1-202ENST00000368323 BICRAQ9NZM4 1560 aa17.62■□□□□ 0.41
RIT1-202ENST00000368323 BAZ1AQ9NRL2 1556 aaPredicted RBP17.61■□□□□ 0.41
RIT1-202ENST00000368323 SMARCA4P51532 1647 aa17.51■□□□□ 0.39
RIT1-202ENST00000368323 CCDC88BA6NC98 1476 aa17.43■□□□□ 0.38
RIT1-202ENST00000368323 PCGF6Q9BYE7 350 aa17.35■□□□□ 0.37
RIT1-202ENST00000368323 TOP2AP11388 1531 aaKnown RBP17.32■□□□□ 0.36
RIT1-202ENST00000368323 ABCC8Q09428 1581 aa17.32■□□□□ 0.36
RIT1-202ENST00000368323 PPARGC1BQ86YN6 1023 aaKnown RBP17.32■□□□□ 0.36
RIT1-202ENST00000368323 ATAD2BQ9ULI0 1458 aa17.3■□□□□ 0.36
RIT1-202ENST00000368323 BAZ1BQ9UIG0 1483 aaKnown RBP17.29■□□□□ 0.36
RIT1-202ENST00000368323 SMARCA2P51531 1590 aa17.26■□□□□ 0.35
RIT1-202ENST00000368323 RANGAP1P46060 587 aaPredicted RBP17.24■□□□□ 0.35
RIT1-202ENST00000368323 TTBK1Q5TCY1 1321 aaPredicted RBP17.23■□□□□ 0.35
RIT1-202ENST00000368323 EIF4G1Q04637 1599 aaKnown RBP17.15■□□□□ 0.34
RIT1-202ENST00000368323 UBTFP17480 764 aaKnown RBP17.14■□□□□ 0.33
RIT1-202ENST00000368323 SOGA1O94964 1423 aa17.12■□□□□ 0.33
RIT1-202ENST00000368323 DNAJC5BQ9UF47 199 aa17.09■□□□□ 0.33
RIT1-202ENST00000368323 RUSC2Q8N2Y8 1516 aa17.07■□□□□ 0.32
RIT1-202ENST00000368323 WRNQ14191 1432 aaPredicted RBP eCLIP17.04■□□□□ 0.32
RIT1-202ENST00000368323 CSRNP3Q8WYN3 585 aa17.02■□□□□ 0.32
RIT1-202ENST00000368323 PEG3Q9GZU2 1588 aa17■□□□□ 0.31
RIT1-202ENST00000368323 NCAPD3P42695 1498 aa16.97■□□□□ 0.31
RIT1-202ENST00000368323 CC2D2AQ9P2K1 1620 aa16.89■□□□□ 0.29
RIT1-202ENST00000368323 TRIM26Q12899 539 aaPredicted RBP16.87■□□□□ 0.29
RIT1-202ENST00000368323 SYNJ1O43426 1573 aa16.86■□□□□ 0.29
RIT1-202ENST00000368323 HMGXB3Q12766 1538 aa16.79■□□□□ 0.28
RIT1-202ENST00000368323 NESP48681 1621 aa16.77■□□□□ 0.28
RIT1-202ENST00000368323 CADPSQ9ULU8 1353 aa16.76■□□□□ 0.27
RIT1-202ENST00000368323 CEP162Q5TB80 1403 aa16.72■□□□□ 0.27
RIT1-202ENST00000368323 CFTRP13569 1480 aa16.72■□□□□ 0.27
RIT1-202ENST00000368323 HRCP23327 699 aa16.71■□□□□ 0.27
RIT1-202ENST00000368323 CUX1P39880 1505 aa16.66■□□□□ 0.26
RIT1-202ENST00000368323 RAPGEF2Q9Y4G8 1499 aa16.66■□□□□ 0.26
RIT1-202ENST00000368323 TNIKQ9UKE5 1360 aa16.63■□□□□ 0.25
RIT1-202ENST00000368323 GOLGA3Q08378 1498 aa16.62■□□□□ 0.25
RIT1-202ENST00000368323 EEA1Q15075 1411 aa16.62■□□□□ 0.25
RIT1-202ENST00000368323 P3H3Q8IVL6 736 aa16.62■□□□□ 0.25
RIT1-202ENST00000368323 ATP1B4Q9UN42 357 aaPredicted RBP16.6■□□□□ 0.25
RIT1-202ENST00000368323 FANCD2Q9BXW9 1451 aa16.6■□□□□ 0.25
RIT1-202ENST00000368323 APLP2Q06481 763 aa16.59■□□□□ 0.25
RIT1-202ENST00000368323 CUX2O14529 1486 aa16.58■□□□□ 0.24
RIT1-202ENST00000368323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.57■□□□□ 0.24
RIT1-202ENST00000368323 TOP2BQ02880 1626 aa16.57■□□□□ 0.24
RIT1-202ENST00000368323 CEP164Q9UPV0 1460 aa16.57■□□□□ 0.24
RIT1-202ENST00000368323 CLIP1P30622 1438 aa16.55■□□□□ 0.24
RIT1-202ENST00000368323 KIF27Q86VH2 1401 aa16.55■□□□□ 0.24
RIT1-202ENST00000368323 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
RIT1-202ENST00000368323 HNRNPUL2Q1KMD3 747 aaKnown RBP16.52■□□□□ 0.23
RIT1-202ENST00000368323 FGD5Q6ZNL6 1462 aa16.52■□□□□ 0.23
RIT1-202ENST00000368323 TDRD9Q8NDG6 1382 aaKnown RBP16.5■□□□□ 0.23
RIT1-202ENST00000368323 IGF1RP08069 1367 aa16.45■□□□□ 0.22
RIT1-202ENST00000368323 CCER1Q8TC90 406 aaPredicted RBP16.44■□□□□ 0.22
RIT1-202ENST00000368323 CARMIL1Q5VZK9 1371 aa16.42■□□□□ 0.22
RIT1-202ENST00000368323 BIVM-ERCC5R4GMW8 1640 aa16.42■□□□□ 0.22
RIT1-202ENST00000368323 ITGAEP38570 1179 aa16.4■□□□□ 0.22
RIT1-202ENST00000368323 PDS5BQ9NTI5 1447 aa16.37■□□□□ 0.21
RIT1-202ENST00000368323 TOPBP1Q92547 1522 aa16.37■□□□□ 0.21
RIT1-202ENST00000368323 PRXQ9BXM0 1461 aa16.37■□□□□ 0.21
RIT1-202ENST00000368323 KANK4Q5T7N3 995 aaPredicted RBP16.37■□□□□ 0.21
RIT1-202ENST00000368323 POLA1P09884 1462 aaPredicted RBP16.37■□□□□ 0.21
RIT1-202ENST00000368323 ARID3CA6NKF2 412 aa16.35■□□□□ 0.21
RIT1-202ENST00000368323 KIF21BO75037 1637 aa16.34■□□□□ 0.21
RIT1-202ENST00000368323 URB2Q14146 1524 aaKnown RBP16.34■□□□□ 0.21
RIT1-202ENST00000368323 FBLN2P98095 1184 aa16.33■□□□□ 0.2
RIT1-202ENST00000368323 VPS8Q8N3P4 1428 aa16.29■□□□□ 0.2
RIT1-202ENST00000368323 ARAP1Q96P48 1450 aa16.26■□□□□ 0.19
RIT1-202ENST00000368323 AQRO60306 1485 aaKnown RBP eCLIP16.26■□□□□ 0.195e-6■■□□□ 14.3
RIT1-202ENST00000368323 LAMC3Q9Y6N6 1575 aa16.25■□□□□ 0.19
RIT1-202ENST00000368323 ERCC6Q03468 1493 aa16.25■□□□□ 0.19
RIT1-202ENST00000368323 DNMBPQ6XZF7 1577 aa16.25■□□□□ 0.19
RIT1-202ENST00000368323 KIF21AQ7Z4S6 1674 aa16.2■□□□□ 0.18
RIT1-202ENST00000368323 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
RIT1-202ENST00000368323 ARHGAP35Q9NRY4 1499 aa16.19■□□□□ 0.18
RIT1-202ENST00000368323 ERICH3Q5RHP9 1530 aa16.18■□□□□ 0.18
RIT1-202ENST00000368323 FHOD3Q2V2M9 1422 aa16.17■□□□□ 0.18
RIT1-202ENST00000368323 GAPVD1Q14C86 1478 aa16.17■□□□□ 0.18
RIT1-202ENST00000368323 ABCA10Q8WWZ4 1543 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms