RNA–Protein interactions for RNA: ENST00000367222.6

OPTC-201, Transcript of opticin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene OPTC, Length 1,359 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTC-201ENST00000367222 NISCHQ9Y2I1 1504 aa28.37■■■□□ 2.13
OPTC-201ENST00000367222 CCDC180Q9P1Z9 1646 aa25.08■■□□□ 1.61
OPTC-201ENST00000367222 ABCC9O60706 1549 aa24.37■■□□□ 1.49
OPTC-201ENST00000367222 ZCCHC6Q5VYS8 1495 aaKnown RBP23.71■■□□□ 1.39
OPTC-201ENST00000367222 DCAF8L2P0C7V8 631 aa23.59■■□□□ 1.37
OPTC-201ENST00000367222 NACADO15069 1562 aa23.49■■□□□ 1.35
OPTC-201ENST00000367222 RB1CC1Q8TDY2 1594 aa23.47■■□□□ 1.35
OPTC-201ENST00000367222 DCAF1Q9Y4B6 1507 aa23.42■■□□□ 1.34
OPTC-201ENST00000367222 MYO15BQ96JP2 1530 aa23.39■■□□□ 1.33
OPTC-201ENST00000367222 UNC13AQ9UPW8 1703 aa23.06■■□□□ 1.28
OPTC-201ENST00000367222 SCRIBQ14160 1630 aa23.01■■□□□ 1.27
OPTC-201ENST00000367222 BICRAQ9NZM4 1560 aa22.84■■□□□ 1.25
OPTC-201ENST00000367222 PABPN1Q86U42 306 aaKnown RBP eCLIP22.81■■□□□ 1.24
OPTC-201ENST00000367222 SHROOM4Q9ULL8 1493 aa22.68■■□□□ 1.22
OPTC-201ENST00000367222 EIF4G1Q04637 1599 aaKnown RBP22.18■■□□□ 1.14
OPTC-201ENST00000367222 CECR2Q9BXF3 1484 aa22.15■■□□□ 1.14
OPTC-201ENST00000367222 DNAJC5BQ9UF47 199 aa22.14■■□□□ 1.14
OPTC-201ENST00000367222 CC2D2AQ9P2K1 1620 aa22.04■■□□□ 1.12
OPTC-201ENST00000367222 SMARCA4P51532 1647 aa21.98■■□□□ 1.11
OPTC-201ENST00000367222 BAZ1AQ9NRL2 1556 aaPredicted RBP21.94■■□□□ 1.1
OPTC-201ENST00000367222 MROH2BQ7Z745 1585 aa21.93■■□□□ 1.1
OPTC-201ENST00000367222 ATAD2BQ9ULI0 1458 aa21.78■■□□□ 1.08
OPTC-201ENST00000367222 RSF1Q96T23 1441 aaPredicted RBP21.74■■□□□ 1.07
OPTC-201ENST00000367222 WIZO95785 1651 aa21.73■■□□□ 1.07
OPTC-201ENST00000367222 PEG3Q9GZU2 1588 aa21.72■■□□□ 1.07
OPTC-201ENST00000367222 SMARCA2P51531 1590 aa21.71■■□□□ 1.07
OPTC-201ENST00000367222 NCAPD3P42695 1498 aa21.67■■□□□ 1.06
OPTC-201ENST00000367222 HMGXB3Q12766 1538 aa21.61■■□□□ 1.05
OPTC-201ENST00000367222 BAZ1BQ9UIG0 1483 aaKnown RBP21.59■■□□□ 1.05
OPTC-201ENST00000367222 TOP2AP11388 1531 aaKnown RBP21.44■■□□□ 1.02
OPTC-201ENST00000367222 SUPT5HO00267 1087 aaKnown RBP21.39■■□□□ 1.02
OPTC-201ENST00000367222 CCDC88BA6NC98 1476 aa21.21■□□□□ 0.99
OPTC-201ENST00000367222 NESP48681 1621 aa21.19■□□□□ 0.98
OPTC-201ENST00000367222 LAMC3Q9Y6N6 1575 aa21.06■□□□□ 0.96
OPTC-201ENST00000367222 CADPSQ9ULU8 1353 aa21.06■□□□□ 0.96
OPTC-201ENST00000367222 CFTRP13569 1480 aa21.01■□□□□ 0.95
OPTC-201ENST00000367222 KIF21AQ7Z4S6 1674 aa20.95■□□□□ 0.94
OPTC-201ENST00000367222 ERCC6Q03468 1493 aa20.91■□□□□ 0.94
OPTC-201ENST00000367222 PRDM2Q13029 1718 aa20.91■□□□□ 0.94
OPTC-201ENST00000367222 PDS5BQ9NTI5 1447 aa20.87■□□□□ 0.93
OPTC-201ENST00000367222 FANCD2Q9BXW9 1451 aa20.86■□□□□ 0.93
OPTC-201ENST00000367222 THOC2Q8NI27 1593 aaKnown RBP20.79■□□□□ 0.92
OPTC-201ENST00000367222 CEP164Q9UPV0 1460 aa20.79■□□□□ 0.92
OPTC-201ENST00000367222 MRC2Q9UBG0 1479 aa20.71■□□□□ 0.91
OPTC-201ENST00000367222 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
OPTC-201ENST00000367222 WDR62O43379 1518 aa20.65■□□□□ 0.9
OPTC-201ENST00000367222 ABCC8Q09428 1581 aa20.58■□□□□ 0.89
OPTC-201ENST00000367222 TOPBP1Q92547 1522 aa20.57■□□□□ 0.88
OPTC-201ENST00000367222 DNMBPQ6XZF7 1577 aa20.55■□□□□ 0.88
OPTC-201ENST00000367222 CUX1P39880 1505 aa20.55■□□□□ 0.88
OPTC-201ENST00000367222 CUX2O14529 1486 aa20.55■□□□□ 0.88
OPTC-201ENST00000367222 SYNJ1O43426 1573 aa20.48■□□□□ 0.87
OPTC-201ENST00000367222 WRNQ14191 1432 aaPredicted RBP eCLIP20.45■□□□□ 0.86
OPTC-201ENST00000367222 POLA1P09884 1462 aaPredicted RBP20.42■□□□□ 0.86
OPTC-201ENST00000367222 FGD5Q6ZNL6 1462 aa20.42■□□□□ 0.86
OPTC-201ENST00000367222 BIVM-ERCC5R4GMW8 1640 aa20.42■□□□□ 0.86
OPTC-201ENST00000367222 TOP2BQ02880 1626 aa20.4■□□□□ 0.86
OPTC-201ENST00000367222 RAD54L2Q9Y4B4 1467 aa20.36■□□□□ 0.85
OPTC-201ENST00000367222 TARBP1Q13395 1621 aaKnown RBP20.35■□□□□ 0.85
OPTC-201ENST00000367222 IFT140Q96RY7 1462 aa20.32■□□□□ 0.84
OPTC-201ENST00000367222 ZNF608Q9ULD9 1512 aaPredicted RBP20.31■□□□□ 0.84
OPTC-201ENST00000367222 SOGA1O94964 1423 aa20.29■□□□□ 0.84
OPTC-201ENST00000367222 WDR97A6NE52 1622 aa20.26■□□□□ 0.83
OPTC-201ENST00000367222 EIF4G3O43432 1585 aaKnown RBP20.23■□□□□ 0.83
OPTC-201ENST00000367222 AQRO60306 1485 aaKnown RBP eCLIP20.2■□□□□ 0.82
OPTC-201ENST00000367222 TDRD9Q8NDG6 1382 aaKnown RBP20.2■□□□□ 0.82
OPTC-201ENST00000367222 ABCA10Q8WWZ4 1543 aa20.19■□□□□ 0.82
OPTC-201ENST00000367222 ABCA5Q8WWZ7 1642 aa20.13■□□□□ 0.81
OPTC-201ENST00000367222 TRIM41Q8WV44 630 aa20.12■□□□□ 0.81
OPTC-201ENST00000367222 CHIC1Q5VXU3 224 aa20.11■□□□□ 0.81
OPTC-201ENST00000367222 PBRM1Q86U86 1689 aa20.08■□□□□ 0.81
OPTC-201ENST00000367222 GAPVD1Q14C86 1478 aa20.07■□□□□ 0.8
OPTC-201ENST00000367222 GRIN2BQ13224 1484 aa20.02■□□□□ 0.8
OPTC-201ENST00000367222 SNAPC4Q5SXM2 1469 aa20.02■□□□□ 0.8
OPTC-201ENST00000367222 RUSC2Q8N2Y8 1516 aa20.02■□□□□ 0.79
OPTC-201ENST00000367222 KIF27Q86VH2 1401 aa19.97■□□□□ 0.79
OPTC-201ENST00000367222 CHD1O14646 1710 aa19.94■□□□□ 0.78
OPTC-201ENST00000367222 ERICH3Q5RHP9 1530 aa19.93■□□□□ 0.78
OPTC-201ENST00000367222 ADAMTS12P58397 1594 aa19.93■□□□□ 0.78
OPTC-201ENST00000367222 MAGI1Q96QZ7 1491 aaPredicted RBP19.93■□□□□ 0.78
OPTC-201ENST00000367222 IGF1RP08069 1367 aa19.89■□□□□ 0.77
OPTC-201ENST00000367222 SYNJ2O15056 1496 aa19.86■□□□□ 0.77
OPTC-201ENST00000367222 FBLN2P98095 1184 aa19.85■□□□□ 0.77
OPTC-201ENST00000367222 FHAD1B1AJZ9 1412 aa19.83■□□□□ 0.76
OPTC-201ENST00000367222 CUL7Q14999 1698 aa19.82■□□□□ 0.76
OPTC-201ENST00000367222 FAM9AQ8IZU1 332 aaPredicted RBP19.81■□□□□ 0.76
OPTC-201ENST00000367222 GRIN2AQ12879 1464 aa19.8■□□□□ 0.76
OPTC-201ENST00000367222 CHMP7Q8WUX9 453 aaPredicted RBP19.8■□□□□ 0.76
OPTC-201ENST00000367222 CARMIL1Q5VZK9 1371 aa19.77■□□□□ 0.76
OPTC-201ENST00000367222 CEP170Q5SW79 1584 aa19.74■□□□□ 0.75
OPTC-201ENST00000367222 OSCARQ8IYS5 282 aa19.72■□□□□ 0.75
OPTC-201ENST00000367222 EEA1Q15075 1411 aa19.72■□□□□ 0.75
OPTC-201ENST00000367222 CSRNP3Q8WYN3 585 aa19.7■□□□□ 0.74
OPTC-201ENST00000367222 PRXQ9BXM0 1461 aa19.7■□□□□ 0.74
OPTC-201ENST00000367222 CLASP1Q7Z460 1538 aa19.69■□□□□ 0.74
OPTC-201ENST00000367222 NUP160Q12769 1436 aa19.69■□□□□ 0.74
OPTC-201ENST00000367222 RAPGEF2Q9Y4G8 1499 aa19.68■□□□□ 0.74
OPTC-201ENST00000367222 DNAJC5Q9H3Z4 198 aa19.62■□□□□ 0.73
OPTC-201ENST00000367222 KIF21BO75037 1637 aa19.59■□□□□ 0.73
OPTC-201ENST00000367222 EHMT2Q96KQ7 1210 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 179.6 ms