RNA–Protein interactions for RNA: ENST00000366206.2

STRN3-203, Transcript of striatin 3, humanhuman

TSL 4

Gene STRN3, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-203ENST00000366206 NISCHQ9Y2I1 1504 aa26.15■■□□□ 1.78
STRN3-203ENST00000366206 AEBP2Q6ZN18 517 aaPredicted RBP25.49■■□□□ 1.67
STRN3-203ENST00000366206 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
STRN3-203ENST00000366206 CCDC180Q9P1Z9 1646 aa23.13■■□□□ 1.29
STRN3-203ENST00000366206 PHF23Q9BUL5 403 aaPredicted RBP22.19■■□□□ 1.14
STRN3-203ENST00000366206 ZCCHC6Q5VYS8 1495 aaKnown RBP21.93■■□□□ 1.1
STRN3-203ENST00000366206 ABCC9O60706 1549 aa21.84■■□□□ 1.09
STRN3-203ENST00000366206 DCAF1Q9Y4B6 1507 aa21.82■■□□□ 1.08
STRN3-203ENST00000366206 MYO15BQ96JP2 1530 aa21.75■■□□□ 1.07
STRN3-203ENST00000366206 SENP3Q9H4L4 574 aaPredicted RBP21.64■■□□□ 1.05
STRN3-203ENST00000366206 NACADO15069 1562 aa21.58■■□□□ 1.05
STRN3-203ENST00000366206 RB1CC1Q8TDY2 1594 aa21.44■■□□□ 1.02
STRN3-203ENST00000366206 DCAF8L2P0C7V8 631 aa21.34■■□□□ 1.01
STRN3-203ENST00000366206 SCRIBQ14160 1630 aa20.93■□□□□ 0.94
STRN3-203ENST00000366206 UNC13AQ9UPW8 1703 aa20.85■□□□□ 0.93
STRN3-203ENST00000366206 SHROOM4Q9ULL8 1493 aa20.79■□□□□ 0.92
STRN3-203ENST00000366206 BICRAQ9NZM4 1560 aa20.69■□□□□ 0.9
STRN3-203ENST00000366206 PLPPR3Q6T4P5 718 aa20.63■□□□□ 0.89
STRN3-203ENST00000366206 PABPN1Q86U42 306 aaKnown RBP eCLIP20.4■□□□□ 0.86
STRN3-203ENST00000366206 BAZ1AQ9NRL2 1556 aaPredicted RBP20.29■□□□□ 0.84
STRN3-203ENST00000366206 CECR2Q9BXF3 1484 aa20.18■□□□□ 0.82
STRN3-203ENST00000366206 SMARCA4P51532 1647 aa20.17■□□□□ 0.82
STRN3-203ENST00000366206 EIF4G1Q04637 1599 aaKnown RBP20.12■□□□□ 0.81
STRN3-203ENST00000366206 MROH2BQ7Z745 1585 aa20.08■□□□□ 0.81
STRN3-203ENST00000366206 RSF1Q96T23 1441 aaPredicted RBP20.08■□□□□ 0.8
STRN3-203ENST00000366206 PEG3Q9GZU2 1588 aa20.08■□□□□ 0.8
STRN3-203ENST00000366206 FOXD1Q16676 465 aa20.03■□□□□ 0.8
STRN3-203ENST00000366206 SMARCA2P51531 1590 aa20■□□□□ 0.79
STRN3-203ENST00000366206 ATAD2BQ9ULI0 1458 aa19.92■□□□□ 0.78
STRN3-203ENST00000366206 HMGXB3Q12766 1538 aa19.88■□□□□ 0.77
STRN3-203ENST00000366206 NCAPD3P42695 1498 aa19.87■□□□□ 0.77
STRN3-203ENST00000366206 WIZO95785 1651 aa19.87■□□□□ 0.77
STRN3-203ENST00000366206 CC2D2AQ9P2K1 1620 aa19.87■□□□□ 0.77
STRN3-203ENST00000366206 TOP2AP11388 1531 aaKnown RBP19.81■□□□□ 0.76
STRN3-203ENST00000366206 SUPT5HO00267 1087 aaKnown RBP19.79■□□□□ 0.76
STRN3-203ENST00000366206 BAZ1BQ9UIG0 1483 aaKnown RBP19.79■□□□□ 0.76
STRN3-203ENST00000366206 ADRA2BP18089 450 aa19.51■□□□□ 0.71
STRN3-203ENST00000366206 PPP6R1Q9UPN7 881 aa19.5■□□□□ 0.71
STRN3-203ENST00000366206 CCDC88BA6NC98 1476 aa19.49■□□□□ 0.71
STRN3-203ENST00000366206 DNAJC5BQ9UF47 199 aa19.44■□□□□ 0.7
STRN3-203ENST00000366206 CFTRP13569 1480 aa19.31■□□□□ 0.68
STRN3-203ENST00000366206 LAMC3Q9Y6N6 1575 aa19.29■□□□□ 0.68
STRN3-203ENST00000366206 CADPSQ9ULU8 1353 aa19.28■□□□□ 0.68
STRN3-203ENST00000366206 PRDM2Q13029 1718 aa19.25■□□□□ 0.67
STRN3-203ENST00000366206 PDS5BQ9NTI5 1447 aa19.11■□□□□ 0.65
STRN3-203ENST00000366206 NESP48681 1621 aa19.04■□□□□ 0.64
STRN3-203ENST00000366206 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
STRN3-203ENST00000366206 CEP164Q9UPV0 1460 aa18.99■□□□□ 0.63
STRN3-203ENST00000366206 PIAS4Q8N2W9 510 aaPredicted RBP18.96■□□□□ 0.63
STRN3-203ENST00000366206 ABCC8Q09428 1581 aa18.96■□□□□ 0.63
STRN3-203ENST00000366206 WRNQ14191 1432 aaPredicted RBP eCLIP18.94■□□□□ 0.62
STRN3-203ENST00000366206 KIF21AQ7Z4S6 1674 aa18.91■□□□□ 0.62
STRN3-203ENST00000366206 TOP2BQ02880 1626 aa18.89■□□□□ 0.62
STRN3-203ENST00000366206 BIVM-ERCC5R4GMW8 1640 aa18.89■□□□□ 0.62
STRN3-203ENST00000366206 DNMBPQ6XZF7 1577 aa18.87■□□□□ 0.61
STRN3-203ENST00000366206 ERCC6Q03468 1493 aa18.85■□□□□ 0.61
STRN3-203ENST00000366206 MRC2Q9UBG0 1479 aa18.85■□□□□ 0.61
STRN3-203ENST00000366206 SYNJ1O43426 1573 aa18.83■□□□□ 0.6
STRN3-203ENST00000366206 CUX1P39880 1505 aa18.83■□□□□ 0.6
STRN3-203ENST00000366206 WDR62O43379 1518 aa18.8■□□□□ 0.6
STRN3-203ENST00000366206 TOPBP1Q92547 1522 aa18.79■□□□□ 0.6
STRN3-203ENST00000366206 TRIM41Q8WV44 630 aa18.79■□□□□ 0.6
STRN3-203ENST00000366206 THOC2Q8NI27 1593 aaKnown RBP18.78■□□□□ 0.6
STRN3-203ENST00000366206 URB2Q14146 1524 aaKnown RBP18.78■□□□□ 0.6
STRN3-203ENST00000366206 FGD5Q6ZNL6 1462 aa18.68■□□□□ 0.58
STRN3-203ENST00000366206 POLA1P09884 1462 aaPredicted RBP18.67■□□□□ 0.58
STRN3-203ENST00000366206 EEA1Q15075 1411 aa18.65■□□□□ 0.58
STRN3-203ENST00000366206 WDR97A6NE52 1622 aa18.63■□□□□ 0.57
STRN3-203ENST00000366206 ABCA10Q8WWZ4 1543 aa18.61■□□□□ 0.57
STRN3-203ENST00000366206 IFT140Q96RY7 1462 aa18.59■□□□□ 0.57
STRN3-203ENST00000366206 CUX2O14529 1486 aa18.58■□□□□ 0.57
STRN3-203ENST00000366206 SOGA1O94964 1423 aa18.57■□□□□ 0.56
STRN3-203ENST00000366206 TARBP1Q13395 1621 aaKnown RBP18.57■□□□□ 0.56
STRN3-203ENST00000366206 KIF27Q86VH2 1401 aa18.54■□□□□ 0.56
STRN3-203ENST00000366206 RAD54L2Q9Y4B4 1467 aa18.48■□□□□ 0.55
STRN3-203ENST00000366206 ABCA5Q8WWZ7 1642 aa18.48■□□□□ 0.55
STRN3-203ENST00000366206 ERICH3Q5RHP9 1530 aa18.43■□□□□ 0.54
STRN3-203ENST00000366206 GAPVD1Q14C86 1478 aa18.4■□□□□ 0.54
STRN3-203ENST00000366206 MSH5O43196 834 aa18.39■□□□□ 0.53
STRN3-203ENST00000366206 EIF4G3O43432 1585 aaKnown RBP18.38■□□□□ 0.53
STRN3-203ENST00000366206 CUL7Q14999 1698 aa18.38■□□□□ 0.53
STRN3-203ENST00000366206 GRIN2BQ13224 1484 aa18.36■□□□□ 0.53
STRN3-203ENST00000366206 KIF21BO75037 1637 aa18.35■□□□□ 0.53
STRN3-203ENST00000366206 CSRNP3Q8WYN3 585 aa18.35■□□□□ 0.53
STRN3-203ENST00000366206 RUSC2Q8N2Y8 1516 aa18.34■□□□□ 0.53
STRN3-203ENST00000366206 PBRM1Q86U86 1689 aa18.34■□□□□ 0.53
STRN3-203ENST00000366206 IGF1RP08069 1367 aa18.33■□□□□ 0.53
STRN3-203ENST00000366206 TDRD9Q8NDG6 1382 aaKnown RBP18.33■□□□□ 0.53
STRN3-203ENST00000366206 ZNF608Q9ULD9 1512 aaPredicted RBP18.33■□□□□ 0.52
STRN3-203ENST00000366206 PRXQ9BXM0 1461 aa18.33■□□□□ 0.52
STRN3-203ENST00000366206 MAGI1Q96QZ7 1491 aaPredicted RBP18.3■□□□□ 0.52
STRN3-203ENST00000366206 AQRO60306 1485 aaKnown RBP eCLIP18.29■□□□□ 0.52
STRN3-203ENST00000366206 ADAMTS12P58397 1594 aa18.25■□□□□ 0.51
STRN3-203ENST00000366206 GOLGA3Q08378 1498 aa18.25■□□□□ 0.51
STRN3-203ENST00000366206 FHAD1B1AJZ9 1412 aa18.24■□□□□ 0.51
STRN3-203ENST00000366206 RAPGEF2Q9Y4G8 1499 aa18.24■□□□□ 0.51
STRN3-203ENST00000366206 CARMIL1Q5VZK9 1371 aa18.23■□□□□ 0.51
STRN3-203ENST00000366206 PPP4R3CPQ6ZMV5 832 aa18.22■□□□□ 0.51
STRN3-203ENST00000366206 FAM9AQ8IZU1 332 aaPredicted RBP18.21■□□□□ 0.51
STRN3-203ENST00000366206 SYNJ2O15056 1496 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms