RNA–Protein interactions for RNA: ENST00000362552.1

VTRNA3-1P-201, Transcript of vault RNA 3-1, pseudogene, humanhuman

BASIC

Gene VTRNA3-1P, Length 102 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTRNA3-1P-201ENST00000362552 NISCHQ9Y2I1 1504 aa15.36■□□□□ 0.05
VTRNA3-1P-201ENST00000362552 CCDC180Q9P1Z9 1646 aa13.5□□□□□ -0.25
VTRNA3-1P-201ENST00000362552 ABCC9O60706 1549 aa13.13□□□□□ -0.31
VTRNA3-1P-201ENST00000362552 DCAF8L2P0C7V8 631 aa12.99□□□□□ -0.33
VTRNA3-1P-201ENST00000362552 ZCCHC6Q5VYS8 1495 aaKnown RBP12.8□□□□□ -0.36
VTRNA3-1P-201ENST00000362552 NACADO15069 1562 aa12.73□□□□□ -0.37
VTRNA3-1P-201ENST00000362552 DCAF1Q9Y4B6 1507 aa12.7□□□□□ -0.38
VTRNA3-1P-201ENST00000362552 RB1CC1Q8TDY2 1594 aa12.69□□□□□ -0.38
VTRNA3-1P-201ENST00000362552 MYO15BQ96JP2 1530 aa12.68□□□□□ -0.38
VTRNA3-1P-201ENST00000362552 SCRIBQ14160 1630 aa12.38□□□□□ -0.43
VTRNA3-1P-201ENST00000362552 PABPN1Q86U42 306 aaKnown RBP eCLIP12.37□□□□□ -0.43
VTRNA3-1P-201ENST00000362552 SHROOM4Q9ULL8 1493 aa12.35□□□□□ -0.43
VTRNA3-1P-201ENST00000362552 UNC13AQ9UPW8 1703 aa12.24□□□□□ -0.45
VTRNA3-1P-201ENST00000362552 BICRAQ9NZM4 1560 aa12.21□□□□□ -0.46
VTRNA3-1P-201ENST00000362552 CECR2Q9BXF3 1484 aa11.94□□□□□ -0.5
VTRNA3-1P-201ENST00000362552 EIF4G1Q04637 1599 aaKnown RBP11.92□□□□□ -0.5
VTRNA3-1P-201ENST00000362552 BAZ1AQ9NRL2 1556 aaPredicted RBP11.9□□□□□ -0.5
VTRNA3-1P-201ENST00000362552 DNAJC5BQ9UF47 199 aa11.87□□□□□ -0.51
VTRNA3-1P-201ENST00000362552 SMARCA4P51532 1647 aa11.84□□□□□ -0.51
VTRNA3-1P-201ENST00000362552 MROH2BQ7Z745 1585 aa11.83□□□□□ -0.52
VTRNA3-1P-201ENST00000362552 CC2D2AQ9P2K1 1620 aa11.82□□□□□ -0.52
VTRNA3-1P-201ENST00000362552 RSF1Q96T23 1441 aaPredicted RBP11.8□□□□□ -0.52
VTRNA3-1P-201ENST00000362552 SUPT5HO00267 1087 aaKnown RBP11.8□□□□□ -0.52
VTRNA3-1P-201ENST00000362552 ATAD2BQ9ULI0 1458 aa11.78□□□□□ -0.52
VTRNA3-1P-201ENST00000362552 SMARCA2P51531 1590 aa11.78□□□□□ -0.52
VTRNA3-1P-201ENST00000362552 NCAPD3P42695 1498 aa11.76□□□□□ -0.53
VTRNA3-1P-201ENST00000362552 BAZ1BQ9UIG0 1483 aaKnown RBP11.71□□□□□ -0.53
VTRNA3-1P-201ENST00000362552 PEG3Q9GZU2 1588 aa11.7□□□□□ -0.54
VTRNA3-1P-201ENST00000362552 WIZO95785 1651 aa11.68□□□□□ -0.54
VTRNA3-1P-201ENST00000362552 HMGXB3Q12766 1538 aa11.65□□□□□ -0.54
VTRNA3-1P-201ENST00000362552 TOP2AP11388 1531 aaKnown RBP11.6□□□□□ -0.55
VTRNA3-1P-201ENST00000362552 CCDC88BA6NC98 1476 aa11.51□□□□□ -0.57
VTRNA3-1P-201ENST00000362552 CADPSQ9ULU8 1353 aa11.46□□□□□ -0.57
VTRNA3-1P-201ENST00000362552 PDS5BQ9NTI5 1447 aa11.4□□□□□ -0.58
VTRNA3-1P-201ENST00000362552 CFTRP13569 1480 aa11.38□□□□□ -0.59
VTRNA3-1P-201ENST00000362552 LAMC3Q9Y6N6 1575 aa11.38□□□□□ -0.59
VTRNA3-1P-201ENST00000362552 NESP48681 1621 aa11.37□□□□□ -0.59
VTRNA3-1P-201ENST00000362552 ERCC6Q03468 1493 aa11.35□□□□□ -0.59
VTRNA3-1P-201ENST00000362552 FANCD2Q9BXW9 1451 aa11.3□□□□□ -0.6
VTRNA3-1P-201ENST00000362552 CEP164Q9UPV0 1460 aa11.27□□□□□ -0.6
VTRNA3-1P-201ENST00000362552 MRC2Q9UBG0 1479 aa11.2□□□□□ -0.62
VTRNA3-1P-201ENST00000362552 ABCC8Q09428 1581 aa11.2□□□□□ -0.62
VTRNA3-1P-201ENST00000362552 PRDM2Q13029 1718 aa11.18□□□□□ -0.62
VTRNA3-1P-201ENST00000362552 KIF21AQ7Z4S6 1674 aa11.17□□□□□ -0.62
VTRNA3-1P-201ENST00000362552 TRIM41Q8WV44 630 aa11.16□□□□□ -0.62
VTRNA3-1P-201ENST00000362552 WRNQ14191 1432 aaPredicted RBP eCLIP11.16□□□□□ -0.62
VTRNA3-1P-201ENST00000362552 URB2Q14146 1524 aaKnown RBP11.12□□□□□ -0.63
VTRNA3-1P-201ENST00000362552 TOPBP1Q92547 1522 aa11.11□□□□□ -0.63
VTRNA3-1P-201ENST00000362552 DNMBPQ6XZF7 1577 aa11.11□□□□□ -0.63
VTRNA3-1P-201ENST00000362552 WDR62O43379 1518 aa11.1□□□□□ -0.63
VTRNA3-1P-201ENST00000362552 CUX2O14529 1486 aa11.1□□□□□ -0.63
VTRNA3-1P-201ENST00000362552 THOC2Q8NI27 1593 aaKnown RBP11.08□□□□□ -0.64
VTRNA3-1P-201ENST00000362552 CHIC1Q5VXU3 224 aa11.08□□□□□ -0.64
VTRNA3-1P-201ENST00000362552 CUX1P39880 1505 aa11.08□□□□□ -0.64
VTRNA3-1P-201ENST00000362552 SOGA1O94964 1423 aa11.08□□□□□ -0.64
VTRNA3-1P-201ENST00000362552 FGD5Q6ZNL6 1462 aa11.04□□□□□ -0.64
VTRNA3-1P-201ENST00000362552 IFT140Q96RY7 1462 aa11.04□□□□□ -0.64
VTRNA3-1P-201ENST00000362552 TOP2BQ02880 1626 aa11.03□□□□□ -0.64
VTRNA3-1P-201ENST00000362552 POLA1P09884 1462 aaPredicted RBP11.02□□□□□ -0.65
VTRNA3-1P-201ENST00000362552 SYNJ1O43426 1573 aa11.02□□□□□ -0.65
VTRNA3-1P-201ENST00000362552 RAD54L2Q9Y4B4 1467 aa11□□□□□ -0.65
VTRNA3-1P-201ENST00000362552 BIVM-ERCC5R4GMW8 1640 aa10.99□□□□□ -0.65
VTRNA3-1P-201ENST00000362552 TDRD9Q8NDG6 1382 aaKnown RBP10.97□□□□□ -0.65
VTRNA3-1P-201ENST00000362552 ABCA10Q8WWZ4 1543 aa10.94□□□□□ -0.66
VTRNA3-1P-201ENST00000362552 KIF27Q86VH2 1401 aa10.94□□□□□ -0.66
VTRNA3-1P-201ENST00000362552 AQRO60306 1485 aaKnown RBP eCLIP10.93□□□□□ -0.66
VTRNA3-1P-201ENST00000362552 ZNF608Q9ULD9 1512 aaPredicted RBP10.92□□□□□ -0.66
VTRNA3-1P-201ENST00000362552 GAPVD1Q14C86 1478 aa10.92□□□□□ -0.66
VTRNA3-1P-201ENST00000362552 TARBP1Q13395 1621 aaKnown RBP10.91□□□□□ -0.66
VTRNA3-1P-201ENST00000362552 FAM9AQ8IZU1 332 aaPredicted RBP10.91□□□□□ -0.66
VTRNA3-1P-201ENST00000362552 FBLN2P98095 1184 aa10.89□□□□□ -0.67
VTRNA3-1P-201ENST00000362552 GRIN2BQ13224 1484 aa10.88□□□□□ -0.67
VTRNA3-1P-201ENST00000362552 CHMP7Q8WUX9 453 aaPredicted RBP10.88□□□□□ -0.67
VTRNA3-1P-201ENST00000362552 CSRNP3Q8WYN3 585 aa10.88□□□□□ -0.67
VTRNA3-1P-201ENST00000362552 WDR97A6NE52 1622 aa10.87□□□□□ -0.67
VTRNA3-1P-201ENST00000362552 EEA1Q15075 1411 aa10.86□□□□□ -0.67
VTRNA3-1P-201ENST00000362552 IGF1RP08069 1367 aa10.86□□□□□ -0.67
VTRNA3-1P-201ENST00000362552 EIF4G3O43432 1585 aaKnown RBP10.84□□□□□ -0.67
VTRNA3-1P-201ENST00000362552 CARMIL1Q5VZK9 1371 aa10.82□□□□□ -0.68
VTRNA3-1P-201ENST00000362552 ERICH3Q5RHP9 1530 aa10.82□□□□□ -0.68
VTRNA3-1P-201ENST00000362552 RUSC2Q8N2Y8 1516 aa10.82□□□□□ -0.68
VTRNA3-1P-201ENST00000362552 SNAPC4Q5SXM2 1469 aa10.81□□□□□ -0.68
VTRNA3-1P-201ENST00000362552 MAGI1Q96QZ7 1491 aaPredicted RBP10.81□□□□□ -0.68
VTRNA3-1P-201ENST00000362552 OSCARQ8IYS5 282 aa10.81□□□□□ -0.68
VTRNA3-1P-201ENST00000362552 ABCA5Q8WWZ7 1642 aa10.8□□□□□ -0.68
VTRNA3-1P-201ENST00000362552 FHAD1B1AJZ9 1412 aa10.8□□□□□ -0.68
VTRNA3-1P-201ENST00000362552 SYNJ2O15056 1496 aa10.77□□□□□ -0.69
VTRNA3-1P-201ENST00000362552 UBTFP17480 764 aaKnown RBP10.76□□□□□ -0.69
VTRNA3-1P-201ENST00000362552 EHMT2Q96KQ7 1210 aa10.76□□□□□ -0.69
VTRNA3-1P-201ENST00000362552 PBRM1Q86U86 1689 aa10.76□□□□□ -0.69
VTRNA3-1P-201ENST00000362552 RAPGEF2Q9Y4G8 1499 aa10.74□□□□□ -0.69
VTRNA3-1P-201ENST00000362552 CUL7Q14999 1698 aa10.73□□□□□ -0.69
VTRNA3-1P-201ENST00000362552 GRIN2AQ12879 1464 aa10.71□□□□□ -0.69
VTRNA3-1P-201ENST00000362552 PRXQ9BXM0 1461 aa10.71□□□□□ -0.69
VTRNA3-1P-201ENST00000362552 ADAMTS12P58397 1594 aa10.7□□□□□ -0.7
VTRNA3-1P-201ENST00000362552 JPH4Q96JJ6 628 aa10.67□□□□□ -0.7
VTRNA3-1P-201ENST00000362552 GOLGA3Q08378 1498 aa10.67□□□□□ -0.7
VTRNA3-1P-201ENST00000362552 LOC105371045A0A1W2PR82 267 aa10.65□□□□□ -0.7
VTRNA3-1P-201ENST00000362552 RANGAP1P46060 587 aaPredicted RBP10.65□□□□□ -0.7
VTRNA3-1P-201ENST00000362552 NUP160Q12769 1436 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 244.8 ms