RNA–Protein interactions for RNA: ENST00000361987.5

CNTF-201, Transcript of ciliary neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTF, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTF-201ENST00000361987 NISCHQ9Y2I1 1504 aa29.84■■■□□ 2.37
CNTF-201ENST00000361987 CCDC180Q9P1Z9 1646 aa26.31■■□□□ 1.8
CNTF-201ENST00000361987 ABCC9O60706 1549 aa25.61■■□□□ 1.69
CNTF-201ENST00000361987 DCAF8L2P0C7V8 631 aa25.03■■□□□ 1.6
CNTF-201ENST00000361987 ZCCHC6Q5VYS8 1495 aaKnown RBP24.9■■□□□ 1.58
CNTF-201ENST00000361987 NACADO15069 1562 aa24.72■■□□□ 1.55
CNTF-201ENST00000361987 RB1CC1Q8TDY2 1594 aa24.68■■□□□ 1.54
CNTF-201ENST00000361987 DCAF1Q9Y4B6 1507 aa24.65■■□□□ 1.54
CNTF-201ENST00000361987 MYO15BQ96JP2 1530 aa24.63■■□□□ 1.53
CNTF-201ENST00000361987 SCRIBQ14160 1630 aa24.13■■□□□ 1.45
CNTF-201ENST00000361987 UNC13AQ9UPW8 1703 aa24.09■■□□□ 1.45
CNTF-201ENST00000361987 PABPN1Q86U42 306 aaKnown RBP eCLIP24.06■■□□□ 1.44
CNTF-201ENST00000361987 BICRAQ9NZM4 1560 aa23.91■■□□□ 1.42
CNTF-201ENST00000361987 SHROOM4Q9ULL8 1493 aa23.91■■□□□ 1.42
CNTF-201ENST00000361987 EIF4G1Q04637 1599 aaKnown RBP23.28■■□□□ 1.32
CNTF-201ENST00000361987 DNAJC5BQ9UF47 199 aa23.28■■□□□ 1.32
CNTF-201ENST00000361987 CECR2Q9BXF3 1484 aa23.26■■□□□ 1.31
CNTF-201ENST00000361987 CC2D2AQ9P2K1 1620 aa23.12■■□□□ 1.29
CNTF-201ENST00000361987 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
CNTF-201ENST00000361987 SMARCA4P51532 1647 aa23.08■■□□□ 1.28
CNTF-201ENST00000361987 MROH2BQ7Z745 1585 aa23.03■■□□□ 1.28
CNTF-201ENST00000361987 ATAD2BQ9ULI0 1458 aa22.91■■□□□ 1.26
CNTF-201ENST00000361987 RSF1Q96T23 1441 aaPredicted RBP22.89■■□□□ 1.25
CNTF-201ENST00000361987 SMARCA2P51531 1590 aa22.87■■□□□ 1.25
CNTF-201ENST00000361987 NCAPD3P42695 1498 aa22.84■■□□□ 1.25
CNTF-201ENST00000361987 PEG3Q9GZU2 1588 aa22.81■■□□□ 1.24
CNTF-201ENST00000361987 WIZO95785 1651 aa22.79■■□□□ 1.24
CNTF-201ENST00000361987 BAZ1BQ9UIG0 1483 aaKnown RBP22.74■■□□□ 1.23
CNTF-201ENST00000361987 HMGXB3Q12766 1538 aa22.71■■□□□ 1.23
CNTF-201ENST00000361987 SUPT5HO00267 1087 aaKnown RBP22.68■■□□□ 1.22
CNTF-201ENST00000361987 TOP2AP11388 1531 aaKnown RBP22.53■■□□□ 1.2
CNTF-201ENST00000361987 CCDC88BA6NC98 1476 aa22.32■■□□□ 1.16
CNTF-201ENST00000361987 NESP48681 1621 aa22.24■■□□□ 1.15
CNTF-201ENST00000361987 CADPSQ9ULU8 1353 aa22.23■■□□□ 1.15
CNTF-201ENST00000361987 LAMC3Q9Y6N6 1575 aa22.16■■□□□ 1.14
CNTF-201ENST00000361987 CFTRP13569 1480 aa22.12■■□□□ 1.13
CNTF-201ENST00000361987 PDS5BQ9NTI5 1447 aa22.06■■□□□ 1.12
CNTF-201ENST00000361987 ERCC6Q03468 1493 aa22.05■■□□□ 1.12
CNTF-201ENST00000361987 FANCD2Q9BXW9 1451 aa21.96■■□□□ 1.11
CNTF-201ENST00000361987 KIF21AQ7Z4S6 1674 aa21.92■■□□□ 1.1
CNTF-201ENST00000361987 CEP164Q9UPV0 1460 aa21.89■■□□□ 1.09
CNTF-201ENST00000361987 PRDM2Q13029 1718 aa21.89■■□□□ 1.09
CNTF-201ENST00000361987 MRC2Q9UBG0 1479 aa21.78■■□□□ 1.08
CNTF-201ENST00000361987 THOC2Q8NI27 1593 aaKnown RBP21.74■■□□□ 1.07
CNTF-201ENST00000361987 URB2Q14146 1524 aaKnown RBP21.7■■□□□ 1.06
CNTF-201ENST00000361987 WDR62O43379 1518 aa21.67■■□□□ 1.06
CNTF-201ENST00000361987 CUX2O14529 1486 aa21.63■■□□□ 1.05
CNTF-201ENST00000361987 ABCC8Q09428 1581 aa21.63■■□□□ 1.05
CNTF-201ENST00000361987 TOPBP1Q92547 1522 aa21.63■■□□□ 1.05
CNTF-201ENST00000361987 DNMBPQ6XZF7 1577 aa21.6■■□□□ 1.05
CNTF-201ENST00000361987 WRNQ14191 1432 aaPredicted RBP eCLIP21.58■■□□□ 1.05
CNTF-201ENST00000361987 CUX1P39880 1505 aa21.57■■□□□ 1.04
CNTF-201ENST00000361987 POLA1P09884 1462 aaPredicted RBP21.47■■□□□ 1.03
CNTF-201ENST00000361987 SYNJ1O43426 1573 aa21.47■■□□□ 1.03
CNTF-201ENST00000361987 FGD5Q6ZNL6 1462 aa21.47■■□□□ 1.03
CNTF-201ENST00000361987 TOP2BQ02880 1626 aa21.44■■□□□ 1.02
CNTF-201ENST00000361987 SOGA1O94964 1423 aa21.43■■□□□ 1.02
CNTF-201ENST00000361987 IFT140Q96RY7 1462 aa21.41■■□□□ 1.02
CNTF-201ENST00000361987 RAD54L2Q9Y4B4 1467 aa21.41■■□□□ 1.02
CNTF-201ENST00000361987 BIVM-ERCC5R4GMW8 1640 aa21.41■■□□□ 1.02
CNTF-201ENST00000361987 TRIM41Q8WV44 630 aa21.38■■□□□ 1.01
CNTF-201ENST00000361987 TARBP1Q13395 1621 aaKnown RBP21.33■■□□□ 1.01
CNTF-201ENST00000361987 ZNF608Q9ULD9 1512 aaPredicted RBP21.32■■□□□ 1
CNTF-201ENST00000361987 TDRD9Q8NDG6 1382 aaKnown RBP21.3■■□□□ 1
CNTF-201ENST00000361987 CHIC1Q5VXU3 224 aa21.28■■□□□ 1
CNTF-201ENST00000361987 AQRO60306 1485 aaKnown RBP eCLIP21.27■■□□□ 1
CNTF-201ENST00000361987 ABCA10Q8WWZ4 1543 aa21.25■□□□□ 0.99
CNTF-201ENST00000361987 EIF4G3O43432 1585 aaKnown RBP21.19■□□□□ 0.98
CNTF-201ENST00000361987 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
CNTF-201ENST00000361987 GAPVD1Q14C86 1478 aa21.17■□□□□ 0.98
CNTF-201ENST00000361987 KIF27Q86VH2 1401 aa21.11■□□□□ 0.97
CNTF-201ENST00000361987 GRIN2BQ13224 1484 aa21.1■□□□□ 0.97
CNTF-201ENST00000361987 ABCA5Q8WWZ7 1642 aa21.1■□□□□ 0.97
CNTF-201ENST00000361987 FBLN2P98095 1184 aa21.05■□□□□ 0.96
CNTF-201ENST00000361987 SNAPC4Q5SXM2 1469 aa21.04■□□□□ 0.96
CNTF-201ENST00000361987 RUSC2Q8N2Y8 1516 aa21.03■□□□□ 0.96
CNTF-201ENST00000361987 PBRM1Q86U86 1689 aa21.03■□□□□ 0.96
CNTF-201ENST00000361987 IGF1RP08069 1367 aa21■□□□□ 0.95
CNTF-201ENST00000361987 CHMP7Q8WUX9 453 aaPredicted RBP21■□□□□ 0.95
CNTF-201ENST00000361987 MAGI1Q96QZ7 1491 aaPredicted RBP21■□□□□ 0.95
CNTF-201ENST00000361987 ERICH3Q5RHP9 1530 aa21■□□□□ 0.95
CNTF-201ENST00000361987 FAM9AQ8IZU1 332 aaPredicted RBP20.97■□□□□ 0.95
CNTF-201ENST00000361987 SYNJ2O15056 1496 aa20.93■□□□□ 0.94
CNTF-201ENST00000361987 FHAD1B1AJZ9 1412 aa20.92■□□□□ 0.94
CNTF-201ENST00000361987 OSCARQ8IYS5 282 aa20.92■□□□□ 0.94
CNTF-201ENST00000361987 CSRNP3Q8WYN3 585 aa20.9■□□□□ 0.94
CNTF-201ENST00000361987 CARMIL1Q5VZK9 1371 aa20.9■□□□□ 0.94
CNTF-201ENST00000361987 ADAMTS12P58397 1594 aa20.88■□□□□ 0.93
CNTF-201ENST00000361987 EEA1Q15075 1411 aa20.87■□□□□ 0.93
CNTF-201ENST00000361987 CHD1O14646 1710 aa20.86■□□□□ 0.93
CNTF-201ENST00000361987 CUL7Q14999 1698 aa20.84■□□□□ 0.93
CNTF-201ENST00000361987 GRIN2AQ12879 1464 aa20.83■□□□□ 0.92
CNTF-201ENST00000361987 RAPGEF2Q9Y4G8 1499 aa20.77■□□□□ 0.92
CNTF-201ENST00000361987 PRXQ9BXM0 1461 aa20.75■□□□□ 0.91
CNTF-201ENST00000361987 EHMT2Q96KQ7 1210 aa20.73■□□□□ 0.91
CNTF-201ENST00000361987 DNAJC5Q9H3Z4 198 aa20.71■□□□□ 0.91
CNTF-201ENST00000361987 NUP160Q12769 1436 aa20.7■□□□□ 0.91
CNTF-201ENST00000361987 CEP170Q5SW79 1584 aa20.69■□□□□ 0.9
CNTF-201ENST00000361987 CLASP1Q7Z460 1538 aa20.63■□□□□ 0.89
CNTF-201ENST00000361987 KIAA0586Q9BVV6 1533 aa20.61■□□□□ 0.89
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