RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 NISCHQ9Y2I1 1504 aa15.32■□□□□ 0.04
SUDS3-201ENST00000360286 CCDC180Q9P1Z9 1646 aa13.5□□□□□ -0.25
SUDS3-201ENST00000360286 ABCC9O60706 1549 aa13.19□□□□□ -0.3
SUDS3-201ENST00000360286 DCAF8L2P0C7V8 631 aa12.87□□□□□ -0.35
SUDS3-201ENST00000360286 ZCCHC6Q5VYS8 1495 aaKnown RBP12.76□□□□□ -0.37
SUDS3-201ENST00000360286 NACADO15069 1562 aa12.69□□□□□ -0.38
SUDS3-201ENST00000360286 RB1CC1Q8TDY2 1594 aa12.68□□□□□ -0.38
SUDS3-201ENST00000360286 DCAF1Q9Y4B6 1507 aa12.63□□□□□ -0.39
SUDS3-201ENST00000360286 MYO15BQ96JP2 1530 aa12.62□□□□□ -0.39
SUDS3-201ENST00000360286 UNC13AQ9UPW8 1703 aa12.43□□□□□ -0.42
SUDS3-201ENST00000360286 PABPN1Q86U42 306 aaKnown RBP eCLIP12.42□□□□□ -0.42
SUDS3-201ENST00000360286 SCRIBQ14160 1630 aa12.4□□□□□ -0.42
SUDS3-201ENST00000360286 BICRAQ9NZM4 1560 aa12.33□□□□□ -0.44
SUDS3-201ENST00000360286 SHROOM4Q9ULL8 1493 aa12.27□□□□□ -0.45
SUDS3-201ENST00000360286 DNAJC5BQ9UF47 199 aa12.08□□□□□ -0.48
SUDS3-201ENST00000360286 EIF4G1Q04637 1599 aaKnown RBP11.98□□□□□ -0.49
SUDS3-201ENST00000360286 CECR2Q9BXF3 1484 aa11.96□□□□□ -0.49
SUDS3-201ENST00000360286 CC2D2AQ9P2K1 1620 aa11.92□□□□□ -0.5
SUDS3-201ENST00000360286 SMARCA4P51532 1647 aa11.85□□□□□ -0.51
SUDS3-201ENST00000360286 MROH2BQ7Z745 1585 aa11.84□□□□□ -0.51
SUDS3-201ENST00000360286 BAZ1AQ9NRL2 1556 aaPredicted RBP11.84□□□□□ -0.51
SUDS3-201ENST00000360286 ATAD2BQ9ULI0 1458 aa11.77□□□□□ -0.52
SUDS3-201ENST00000360286 RSF1Q96T23 1441 aaPredicted RBP11.75□□□□□ -0.53
SUDS3-201ENST00000360286 NCAPD3P42695 1498 aa11.74□□□□□ -0.53
SUDS3-201ENST00000360286 WIZO95785 1651 aa11.72□□□□□ -0.53
SUDS3-201ENST00000360286 SMARCA2P51531 1590 aa11.72□□□□□ -0.53
SUDS3-201ENST00000360286 PEG3Q9GZU2 1588 aa11.7□□□□□ -0.54
SUDS3-201ENST00000360286 BAZ1BQ9UIG0 1483 aaKnown RBP11.67□□□□□ -0.54
SUDS3-201ENST00000360286 HMGXB3Q12766 1538 aa11.65□□□□□ -0.55
SUDS3-201ENST00000360286 SUPT5HO00267 1087 aaKnown RBP11.61□□□□□ -0.55
SUDS3-201ENST00000360286 TOP2AP11388 1531 aaKnown RBP11.55□□□□□ -0.56
SUDS3-201ENST00000360286 CCDC88BA6NC98 1476 aa11.47□□□□□ -0.57
SUDS3-201ENST00000360286 NESP48681 1621 aa11.46□□□□□ -0.57
SUDS3-201ENST00000360286 CADPSQ9ULU8 1353 aa11.42□□□□□ -0.58
SUDS3-201ENST00000360286 LAMC3Q9Y6N6 1575 aa11.38□□□□□ -0.59
SUDS3-201ENST00000360286 CFTRP13569 1480 aa11.36□□□□□ -0.59
SUDS3-201ENST00000360286 ERCC6Q03468 1493 aa11.33□□□□□ -0.6
SUDS3-201ENST00000360286 PDS5BQ9NTI5 1447 aa11.33□□□□□ -0.6
SUDS3-201ENST00000360286 KIF21AQ7Z4S6 1674 aa11.3□□□□□ -0.6
SUDS3-201ENST00000360286 FANCD2Q9BXW9 1451 aa11.28□□□□□ -0.6
SUDS3-201ENST00000360286 PRDM2Q13029 1718 aa11.24□□□□□ -0.61
SUDS3-201ENST00000360286 CEP164Q9UPV0 1460 aa11.24□□□□□ -0.61
SUDS3-201ENST00000360286 THOC2Q8NI27 1593 aaKnown RBP11.2□□□□□ -0.62
SUDS3-201ENST00000360286 MRC2Q9UBG0 1479 aa11.19□□□□□ -0.62
SUDS3-201ENST00000360286 URB2Q14146 1524 aaKnown RBP11.17□□□□□ -0.62
SUDS3-201ENST00000360286 WDR62O43379 1518 aa11.14□□□□□ -0.63
SUDS3-201ENST00000360286 CUX2O14529 1486 aa11.13□□□□□ -0.63
SUDS3-201ENST00000360286 TOPBP1Q92547 1522 aa11.11□□□□□ -0.63
SUDS3-201ENST00000360286 ABCC8Q09428 1581 aa11.09□□□□□ -0.63
SUDS3-201ENST00000360286 CUX1P39880 1505 aa11.09□□□□□ -0.63
SUDS3-201ENST00000360286 DNMBPQ6XZF7 1577 aa11.08□□□□□ -0.64
SUDS3-201ENST00000360286 WRNQ14191 1432 aaPredicted RBP eCLIP11.05□□□□□ -0.64
SUDS3-201ENST00000360286 POLA1P09884 1462 aaPredicted RBP11.02□□□□□ -0.65
SUDS3-201ENST00000360286 FGD5Q6ZNL6 1462 aa11.02□□□□□ -0.65
SUDS3-201ENST00000360286 RAD54L2Q9Y4B4 1467 aa11.02□□□□□ -0.65
SUDS3-201ENST00000360286 SYNJ1O43426 1573 aa11.02□□□□□ -0.65
SUDS3-201ENST00000360286 SOGA1O94964 1423 aa11.01□□□□□ -0.65
SUDS3-201ENST00000360286 IFT140Q96RY7 1462 aa11□□□□□ -0.65
SUDS3-201ENST00000360286 TOP2BQ02880 1626 aa10.99□□□□□ -0.65
SUDS3-201ENST00000360286 BIVM-ERCC5R4GMW8 1640 aa10.98□□□□□ -0.65
SUDS3-201ENST00000360286 ZNF608Q9ULD9 1512 aaPredicted RBP10.98□□□□□ -0.65
SUDS3-201ENST00000360286 TARBP1Q13395 1621 aaKnown RBP10.98□□□□□ -0.65
SUDS3-201ENST00000360286 AQRO60306 1485 aaKnown RBP eCLIP10.95□□□□□ -0.66
SUDS3-201ENST00000360286 TDRD9Q8NDG6 1382 aaKnown RBP10.95□□□□□ -0.66
SUDS3-201ENST00000360286 TRIM41Q8WV44 630 aa10.93□□□□□ -0.66
SUDS3-201ENST00000360286 ABCA10Q8WWZ4 1543 aa10.9□□□□□ -0.66
SUDS3-201ENST00000360286 CHIC1Q5VXU3 224 aa10.9□□□□□ -0.66
SUDS3-201ENST00000360286 EIF4G3O43432 1585 aaKnown RBP10.89□□□□□ -0.67
SUDS3-201ENST00000360286 WDR97A6NE52 1622 aa10.88□□□□□ -0.67
SUDS3-201ENST00000360286 GAPVD1Q14C86 1478 aa10.87□□□□□ -0.67
SUDS3-201ENST00000360286 ABCA5Q8WWZ7 1642 aa10.84□□□□□ -0.67
SUDS3-201ENST00000360286 GRIN2BQ13224 1484 aa10.83□□□□□ -0.68
SUDS3-201ENST00000360286 FBLN2P98095 1184 aa10.82□□□□□ -0.68
SUDS3-201ENST00000360286 RUSC2Q8N2Y8 1516 aa10.82□□□□□ -0.68
SUDS3-201ENST00000360286 PBRM1Q86U86 1689 aa10.82□□□□□ -0.68
SUDS3-201ENST00000360286 SNAPC4Q5SXM2 1469 aa10.81□□□□□ -0.68
SUDS3-201ENST00000360286 KIF27Q86VH2 1401 aa10.81□□□□□ -0.68
SUDS3-201ENST00000360286 IGF1RP08069 1367 aa10.79□□□□□ -0.68
SUDS3-201ENST00000360286 CHMP7Q8WUX9 453 aaPredicted RBP10.79□□□□□ -0.68
SUDS3-201ENST00000360286 OSCARQ8IYS5 282 aa10.78□□□□□ -0.68
SUDS3-201ENST00000360286 MAGI1Q96QZ7 1491 aaPredicted RBP10.76□□□□□ -0.69
SUDS3-201ENST00000360286 ERICH3Q5RHP9 1530 aa10.76□□□□□ -0.69
SUDS3-201ENST00000360286 CHD1O14646 1710 aa10.75□□□□□ -0.69
SUDS3-201ENST00000360286 FAM9AQ8IZU1 332 aaPredicted RBP10.75□□□□□ -0.69
SUDS3-201ENST00000360286 FHAD1B1AJZ9 1412 aa10.74□□□□□ -0.69
SUDS3-201ENST00000360286 SYNJ2O15056 1496 aa10.74□□□□□ -0.69
SUDS3-201ENST00000360286 DNAJC5Q9H3Z4 198 aa10.73□□□□□ -0.69
SUDS3-201ENST00000360286 CARMIL1Q5VZK9 1371 aa10.72□□□□□ -0.69
SUDS3-201ENST00000360286 ADAMTS12P58397 1594 aa10.72□□□□□ -0.69
SUDS3-201ENST00000360286 CSRNP3Q8WYN3 585 aa10.71□□□□□ -0.69
SUDS3-201ENST00000360286 GRIN2AQ12879 1464 aa10.69□□□□□ -0.7
SUDS3-201ENST00000360286 CUL7Q14999 1698 aa10.67□□□□□ -0.7
SUDS3-201ENST00000360286 EEA1Q15075 1411 aa10.65□□□□□ -0.7
SUDS3-201ENST00000360286 CEP170Q5SW79 1584 aa10.65□□□□□ -0.71
SUDS3-201ENST00000360286 RAPGEF2Q9Y4G8 1499 aa10.64□□□□□ -0.71
SUDS3-201ENST00000360286 EHMT2Q96KQ7 1210 aa10.64□□□□□ -0.71
SUDS3-201ENST00000360286 NUP160Q12769 1436 aa10.64□□□□□ -0.71
SUDS3-201ENST00000360286 PRXQ9BXM0 1461 aa10.63□□□□□ -0.71
SUDS3-201ENST00000360286 CLASP1Q7Z460 1538 aa10.62□□□□□ -0.71
SUDS3-201ENST00000360286 JPH4Q96JJ6 628 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms