RNA–Protein interactions for RNA: ENST00000360035.6

NXF4-201, Transcript of nuclear RNA export factor 4 pseudogene, humanhuman

TSL 2 BASIC

Gene NXF4, Length 3,617 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF4-201ENST00000360035 NISCHQ9Y2I1 1504 aa14.72□□□□□ -0.05
NXF4-201ENST00000360035 CCDC180Q9P1Z9 1646 aa12.91□□□□□ -0.34
NXF4-201ENST00000360035 ABCC9O60706 1549 aa12.63□□□□□ -0.39
NXF4-201ENST00000360035 DCAF8L2P0C7V8 631 aa12.48□□□□□ -0.41
NXF4-201ENST00000360035 ZCCHC6Q5VYS8 1495 aaKnown RBP12.28□□□□□ -0.44
NXF4-201ENST00000360035 NACADO15069 1562 aa12.15□□□□□ -0.46
NXF4-201ENST00000360035 RB1CC1Q8TDY2 1594 aa12.14□□□□□ -0.47
NXF4-201ENST00000360035 DCAF1Q9Y4B6 1507 aa12.11□□□□□ -0.47
NXF4-201ENST00000360035 MYO15BQ96JP2 1530 aa12.07□□□□□ -0.48
NXF4-201ENST00000360035 SHROOM4Q9ULL8 1493 aa11.93□□□□□ -0.5
NXF4-201ENST00000360035 SCRIBQ14160 1630 aa11.92□□□□□ -0.5
NXF4-201ENST00000360035 PABPN1Q86U42 306 aaKnown RBP eCLIP11.9□□□□□ -0.5
NXF4-201ENST00000360035 UNC13AQ9UPW8 1703 aa11.81□□□□□ -0.52
NXF4-201ENST00000360035 BICRAQ9NZM4 1560 aa11.73□□□□□ -0.53
NXF4-201ENST00000360035 SUPT5HO00267 1087 aaKnown RBP11.72□□□□□ -0.53
NXF4-201ENST00000360035 CECR2Q9BXF3 1484 aa11.49□□□□□ -0.57
NXF4-201ENST00000360035 EIF4G1Q04637 1599 aaKnown RBP11.44□□□□□ -0.58
NXF4-201ENST00000360035 DNAJC5BQ9UF47 199 aa11.43□□□□□ -0.58
NXF4-201ENST00000360035 BAZ1AQ9NRL2 1556 aaPredicted RBP11.39□□□□□ -0.59
NXF4-201ENST00000360035 MROH2BQ7Z745 1585 aa11.37□□□□□ -0.59
NXF4-201ENST00000360035 SMARCA4P51532 1647 aa11.36□□□□□ -0.59
NXF4-201ENST00000360035 CC2D2AQ9P2K1 1620 aa11.36□□□□□ -0.59
NXF4-201ENST00000360035 RSF1Q96T23 1441 aaPredicted RBP11.32□□□□□ -0.6
NXF4-201ENST00000360035 ATAD2BQ9ULI0 1458 aa11.29□□□□□ -0.6
NXF4-201ENST00000360035 SMARCA2P51531 1590 aa11.26□□□□□ -0.61
NXF4-201ENST00000360035 WIZO95785 1651 aa11.25□□□□□ -0.61
NXF4-201ENST00000360035 HRCP23327 699 aa11.23□□□□□ -0.61
NXF4-201ENST00000360035 BAZ1BQ9UIG0 1483 aaKnown RBP11.23□□□□□ -0.61
NXF4-201ENST00000360035 NCAPD3P42695 1498 aa11.23□□□□□ -0.61
NXF4-201ENST00000360035 CHIC1Q5VXU3 224 aa11.22□□□□□ -0.61
NXF4-201ENST00000360035 PEG3Q9GZU2 1588 aa11.19□□□□□ -0.62
NXF4-201ENST00000360035 HMGXB3Q12766 1538 aa11.15□□□□□ -0.62
NXF4-201ENST00000360035 PCGF6Q9BYE7 350 aa11.15□□□□□ -0.63
NXF4-201ENST00000360035 PPARGC1BQ86YN6 1023 aaKnown RBP11.14□□□□□ -0.63
NXF4-201ENST00000360035 TOP2AP11388 1531 aaKnown RBP11.11□□□□□ -0.63
NXF4-201ENST00000360035 PELP1Q8IZL8 1130 aaKnown RBP11.1□□□□□ -0.63
NXF4-201ENST00000360035 CCDC88BA6NC98 1476 aa11.03□□□□□ -0.64
NXF4-201ENST00000360035 NESP48681 1621 aa10.96□□□□□ -0.65
NXF4-201ENST00000360035 CADPSQ9ULU8 1353 aa10.96□□□□□ -0.66
NXF4-201ENST00000360035 LOC105371045A0A1W2PR82 267 aa10.95□□□□□ -0.66
NXF4-201ENST00000360035 TRIM41Q8WV44 630 aa10.91□□□□□ -0.66
NXF4-201ENST00000360035 CFTRP13569 1480 aa10.89□□□□□ -0.67
NXF4-201ENST00000360035 LAMC3Q9Y6N6 1575 aa10.89□□□□□ -0.67
NXF4-201ENST00000360035 ERCC6Q03468 1493 aa10.88□□□□□ -0.67
NXF4-201ENST00000360035 PDS5BQ9NTI5 1447 aa10.88□□□□□ -0.67
NXF4-201ENST00000360035 FAM9AQ8IZU1 332 aaPredicted RBP10.88□□□□□ -0.67
NXF4-201ENST00000360035 TRIM26Q12899 539 aaPredicted RBP10.84□□□□□ -0.67
NXF4-201ENST00000360035 EHMT2Q96KQ7 1210 aa10.84□□□□□ -0.67
NXF4-201ENST00000360035 FANCD2Q9BXW9 1451 aa10.83□□□□□ -0.68
NXF4-201ENST00000360035 CEP164Q9UPV0 1460 aa10.8□□□□□ -0.68
NXF4-201ENST00000360035 KIF21AQ7Z4S6 1674 aa10.77□□□□□ -0.69
NXF4-201ENST00000360035 ZEB1P37275 1124 aaPredicted RBP10.75□□□□□ -0.69
NXF4-201ENST00000360035 PRDM2Q13029 1718 aa10.73□□□□□ -0.69
NXF4-201ENST00000360035 SCAF1Q9H7N4 1312 aaKnown RBP10.73□□□□□ -0.69
NXF4-201ENST00000360035 MRC2Q9UBG0 1479 aa10.72□□□□□ -0.69
NXF4-201ENST00000360035 MYT1Q01538 1121 aa10.71□□□□□ -0.69
NXF4-201ENST00000360035 ABCC8Q09428 1581 aa10.71□□□□□ -0.7
NXF4-201ENST00000360035 WRNQ14191 1432 aaPredicted RBP eCLIP10.69□□□□□ -0.7
NXF4-201ENST00000360035 URB2Q14146 1524 aaKnown RBP10.69□□□□□ -0.7
NXF4-201ENST00000360035 TOPBP1Q92547 1522 aa10.66□□□□□ -0.7
NXF4-201ENST00000360035 THOC2Q8NI27 1593 aaKnown RBP10.66□□□□□ -0.7
NXF4-201ENST00000360035 CUX1P39880 1505 aa10.65□□□□□ -0.71
NXF4-201ENST00000360035 DNMBPQ6XZF7 1577 aa10.64□□□□□ -0.71
NXF4-201ENST00000360035 WDR62O43379 1518 aa10.63□□□□□ -0.71
NXF4-201ENST00000360035 SYNJ1O43426 1573 aa10.61□□□□□ -0.71
NXF4-201ENST00000360035 FGD5Q6ZNL6 1462 aa10.6□□□□□ -0.71
NXF4-201ENST00000360035 SOGA1O94964 1423 aa10.59□□□□□ -0.71
NXF4-201ENST00000360035 CUX2O14529 1486 aa10.59□□□□□ -0.71
NXF4-201ENST00000360035 POLA1P09884 1462 aaPredicted RBP10.59□□□□□ -0.71
NXF4-201ENST00000360035 RAD54L2Q9Y4B4 1467 aa10.58□□□□□ -0.72
NXF4-201ENST00000360035 TOP2BQ02880 1626 aa10.58□□□□□ -0.72
NXF4-201ENST00000360035 SLC24A1O60721 1099 aa10.57□□□□□ -0.72
NXF4-201ENST00000360035 TDRD9Q8NDG6 1382 aaKnown RBP10.54□□□□□ -0.72
NXF4-201ENST00000360035 BIVM-ERCC5R4GMW8 1640 aa10.54□□□□□ -0.72
NXF4-201ENST00000360035 IFT140Q96RY7 1462 aa10.54□□□□□ -0.72
NXF4-201ENST00000360035 CCER1Q8TC90 406 aaPredicted RBP10.52□□□□□ -0.72
NXF4-201ENST00000360035 ZNF608Q9ULD9 1512 aaPredicted RBP10.51□□□□□ -0.73
NXF4-201ENST00000360035 AQRO60306 1485 aaKnown RBP eCLIP10.51□□□□□ -0.73
NXF4-201ENST00000360035 TTBK1Q5TCY1 1321 aaPredicted RBP10.5□□□□□ -0.73
NXF4-201ENST00000360035 TARBP1Q13395 1621 aaKnown RBP10.48□□□□□ -0.73
NXF4-201ENST00000360035 GTF3C3Q9Y5Q9 886 aa10.47□□□□□ -0.73
NXF4-201ENST00000360035 ABCA10Q8WWZ4 1543 aa10.47□□□□□ -0.73
NXF4-201ENST00000360035 UBTFP17480 764 aaKnown RBP10.47□□□□□ -0.73
NXF4-201ENST00000360035 KIF27Q86VH2 1401 aa10.46□□□□□ -0.73
NXF4-201ENST00000360035 FBLN2P98095 1184 aa10.46□□□□□ -0.73
NXF4-201ENST00000360035 CENPBP07199 599 aaPredicted RBP10.45□□□□□ -0.74
NXF4-201ENST00000360035 GAPVD1Q14C86 1478 aa10.45□□□□□ -0.74
NXF4-201ENST00000360035 ACIN1Q9UKV3 1341 aaKnown RBP10.45□□□□□ -0.74
NXF4-201ENST00000360035 NEUROD1Q13562 356 aa10.44□□□□□ -0.74
NXF4-201ENST00000360035 RUSC2Q8N2Y8 1516 aa10.43□□□□□ -0.74
NXF4-201ENST00000360035 EIF4G3O43432 1585 aaKnown RBP10.43□□□□□ -0.74
NXF4-201ENST00000360035 GRIN2BQ13224 1484 aa10.41□□□□□ -0.74
NXF4-201ENST00000360035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.41□□□□□ -0.74
NXF4-201ENST00000360035 CHMP7Q8WUX9 453 aaPredicted RBP10.4□□□□□ -0.74
NXF4-201ENST00000360035 CSRNP3Q8WYN3 585 aa10.4□□□□□ -0.75
NXF4-201ENST00000360035 WDR97A6NE52 1622 aa10.4□□□□□ -0.75
NXF4-201ENST00000360035 APLP2Q06481 763 aa10.39□□□□□ -0.75
NXF4-201ENST00000360035 IGF1RP08069 1367 aa10.38□□□□□ -0.75
NXF4-201ENST00000360035 SNAPC4Q5SXM2 1469 aa10.38□□□□□ -0.75
NXF4-201ENST00000360035 ABCA5Q8WWZ7 1642 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms