RNA–Protein interactions for RNA: ENST00000360011.5

RAI2-202, Transcript of retinoic acid induced 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAI2, Length 2,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2-202ENST00000360011 NISCHQ9Y2I1 1504 aa26.8■■□□□ 1.88
RAI2-202ENST00000360011 CCDC180Q9P1Z9 1646 aa23.56■■□□□ 1.36
RAI2-202ENST00000360011 ZCCHC6Q5VYS8 1495 aaKnown RBP22.48■■□□□ 1.19
RAI2-202ENST00000360011 ABCC9O60706 1549 aa22.37■■□□□ 1.17
RAI2-202ENST00000360011 DCAF1Q9Y4B6 1507 aa22.23■■□□□ 1.15
RAI2-202ENST00000360011 MYO15BQ96JP2 1530 aa22.08■■□□□ 1.13
RAI2-202ENST00000360011 DCAF8L2P0C7V8 631 aa22.02■■□□□ 1.11
RAI2-202ENST00000360011 NACADO15069 1562 aa21.98■■□□□ 1.11
RAI2-202ENST00000360011 SHROOM4Q9ULL8 1493 aa21.88■■□□□ 1.09
RAI2-202ENST00000360011 RB1CC1Q8TDY2 1594 aa21.83■■□□□ 1.09
RAI2-202ENST00000360011 SCRIBQ14160 1630 aa21.52■■□□□ 1.04
RAI2-202ENST00000360011 SUPT5HO00267 1087 aaKnown RBP21.47■■□□□ 1.03
RAI2-202ENST00000360011 UNC13AQ9UPW8 1703 aa21.38■■□□□ 1.01
RAI2-202ENST00000360011 BICRAQ9NZM4 1560 aa21.18■□□□□ 0.98
RAI2-202ENST00000360011 CHIC1Q5VXU3 224 aa21.03■□□□□ 0.96
RAI2-202ENST00000360011 PABPN1Q86U42 306 aaKnown RBP eCLIP21■□□□□ 0.95
RAI2-202ENST00000360011 CECR2Q9BXF3 1484 aa20.8■□□□□ 0.92
RAI2-202ENST00000360011 BAZ1AQ9NRL2 1556 aaPredicted RBP20.73■□□□□ 0.91
RAI2-202ENST00000360011 MROH2BQ7Z745 1585 aa20.67■□□□□ 0.9
RAI2-202ENST00000360011 SMARCA4P51532 1647 aa20.67■□□□□ 0.9
RAI2-202ENST00000360011 RSF1Q96T23 1441 aaPredicted RBP20.66■□□□□ 0.9
RAI2-202ENST00000360011 EIF4G1Q04637 1599 aaKnown RBP20.54■□□□□ 0.88
RAI2-202ENST00000360011 WIZO95785 1651 aa20.48■□□□□ 0.87
RAI2-202ENST00000360011 PEG3Q9GZU2 1588 aa20.47■□□□□ 0.87
RAI2-202ENST00000360011 SMARCA2P51531 1590 aa20.38■□□□□ 0.85
RAI2-202ENST00000360011 ATAD2BQ9ULI0 1458 aa20.38■□□□□ 0.85
RAI2-202ENST00000360011 HRCP23327 699 aa20.35■□□□□ 0.85
RAI2-202ENST00000360011 TOP2AP11388 1531 aaKnown RBP20.31■□□□□ 0.84
RAI2-202ENST00000360011 CC2D2AQ9P2K1 1620 aa20.29■□□□□ 0.84
RAI2-202ENST00000360011 NCAPD3P42695 1498 aa20.27■□□□□ 0.83
RAI2-202ENST00000360011 LOC105371045A0A1W2PR82 267 aa20.26■□□□□ 0.83
RAI2-202ENST00000360011 HMGXB3Q12766 1538 aa20.24■□□□□ 0.83
RAI2-202ENST00000360011 BAZ1BQ9UIG0 1483 aaKnown RBP20.23■□□□□ 0.83
RAI2-202ENST00000360011 PCGF6Q9BYE7 350 aa20.21■□□□□ 0.83
RAI2-202ENST00000360011 TRIM41Q8WV44 630 aa20.12■□□□□ 0.81
RAI2-202ENST00000360011 CCDC88BA6NC98 1476 aa20.05■□□□□ 0.8
RAI2-202ENST00000360011 TRIM26Q12899 539 aaPredicted RBP20■□□□□ 0.79
RAI2-202ENST00000360011 DNAJC5BQ9UF47 199 aa19.93■□□□□ 0.78
RAI2-202ENST00000360011 FAM9AQ8IZU1 332 aaPredicted RBP19.78■□□□□ 0.76
RAI2-202ENST00000360011 CFTRP13569 1480 aa19.73■□□□□ 0.75
RAI2-202ENST00000360011 PPARGC1BQ86YN6 1023 aaKnown RBP19.72■□□□□ 0.75
RAI2-202ENST00000360011 CADPSQ9ULU8 1353 aa19.69■□□□□ 0.74
RAI2-202ENST00000360011 PRDM2Q13029 1718 aa19.67■□□□□ 0.74
RAI2-202ENST00000360011 ZEB1P37275 1124 aaPredicted RBP19.65■□□□□ 0.74
RAI2-202ENST00000360011 LAMC3Q9Y6N6 1575 aa19.63■□□□□ 0.73
RAI2-202ENST00000360011 NESP48681 1621 aa19.57■□□□□ 0.72
RAI2-202ENST00000360011 ABCC8Q09428 1581 aa19.57■□□□□ 0.72
RAI2-202ENST00000360011 EEA1Q15075 1411 aa19.51■□□□□ 0.71
RAI2-202ENST00000360011 FANCD2Q9BXW9 1451 aa19.47■□□□□ 0.71
RAI2-202ENST00000360011 EHMT2Q96KQ7 1210 aa19.46■□□□□ 0.71
RAI2-202ENST00000360011 WRNQ14191 1432 aaPredicted RBP eCLIP19.45■□□□□ 0.7
RAI2-202ENST00000360011 PDS5BQ9NTI5 1447 aa19.45■□□□□ 0.7
RAI2-202ENST00000360011 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
RAI2-202ENST00000360011 TNIKQ9UKE5 1360 aa19.39■□□□□ 0.7
RAI2-202ENST00000360011 CEP164Q9UPV0 1460 aa19.39■□□□□ 0.69
RAI2-202ENST00000360011 SOGA1O94964 1423 aa19.38■□□□□ 0.69
RAI2-202ENST00000360011 KIF21AQ7Z4S6 1674 aa19.38■□□□□ 0.69
RAI2-202ENST00000360011 BIVM-ERCC5R4GMW8 1640 aa19.37■□□□□ 0.69
RAI2-202ENST00000360011 TOP2BQ02880 1626 aa19.37■□□□□ 0.69
RAI2-202ENST00000360011 CUX1P39880 1505 aa19.35■□□□□ 0.69
RAI2-202ENST00000360011 CEP162Q5TB80 1403 aa19.34■□□□□ 0.69
RAI2-202ENST00000360011 CSRNP3Q8WYN3 585 aa19.32■□□□□ 0.68
RAI2-202ENST00000360011 DNMBPQ6XZF7 1577 aa19.29■□□□□ 0.68
RAI2-202ENST00000360011 GOLGA3Q08378 1498 aa19.27■□□□□ 0.68
RAI2-202ENST00000360011 RUSC2Q8N2Y8 1516 aa19.27■□□□□ 0.68
RAI2-202ENST00000360011 URB2Q14146 1524 aaKnown RBP19.26■□□□□ 0.67
RAI2-202ENST00000360011 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
RAI2-202ENST00000360011 MRC2Q9UBG0 1479 aa19.23■□□□□ 0.67
RAI2-202ENST00000360011 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
RAI2-202ENST00000360011 KIF21BO75037 1637 aa19.22■□□□□ 0.67
RAI2-202ENST00000360011 FGD5Q6ZNL6 1462 aa19.17■□□□□ 0.66
RAI2-202ENST00000360011 THOC2Q8NI27 1593 aaKnown RBP19.17■□□□□ 0.66
RAI2-202ENST00000360011 WDR62O43379 1518 aa19.16■□□□□ 0.66
RAI2-202ENST00000360011 POLA1P09884 1462 aaPredicted RBP19.13■□□□□ 0.65
RAI2-202ENST00000360011 UBTFP17480 764 aaKnown RBP19.12■□□□□ 0.65
RAI2-202ENST00000360011 CCER1Q8TC90 406 aaPredicted RBP19.05■□□□□ 0.64
RAI2-202ENST00000360011 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.05■□□□□ 0.64
RAI2-202ENST00000360011 ABCA10Q8WWZ4 1543 aa19.03■□□□□ 0.64
RAI2-202ENST00000360011 WDR97A6NE52 1622 aa19.03■□□□□ 0.64
RAI2-202ENST00000360011 RAD54L2Q9Y4B4 1467 aa19.02■□□□□ 0.64
RAI2-202ENST00000360011 CUX2O14529 1486 aa19.01■□□□□ 0.63
RAI2-202ENST00000360011 TARBP1Q13395 1621 aaKnown RBP19.01■□□□□ 0.63
RAI2-202ENST00000360011 CLIP1P30622 1438 aa18.99■□□□□ 0.63
RAI2-202ENST00000360011 KIF27Q86VH2 1401 aa18.99■□□□□ 0.63
RAI2-202ENST00000360011 VPS8Q8N3P4 1428 aa18.96■□□□□ 0.63
RAI2-202ENST00000360011 IFT140Q96RY7 1462 aa18.96■□□□□ 0.63
RAI2-202ENST00000360011 RAPGEF2Q9Y4G8 1499 aa18.95■□□□□ 0.62
RAI2-202ENST00000360011 ERICH3Q5RHP9 1530 aa18.93■□□□□ 0.62
RAI2-202ENST00000360011 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
RAI2-202ENST00000360011 PRXQ9BXM0 1461 aa18.88■□□□□ 0.61
RAI2-202ENST00000360011 TTBK1Q5TCY1 1321 aaPredicted RBP18.86■□□□□ 0.61
RAI2-202ENST00000360011 TDRD9Q8NDG6 1382 aaKnown RBP18.84■□□□□ 0.61
RAI2-202ENST00000360011 IGF1RP08069 1367 aa18.84■□□□□ 0.61
RAI2-202ENST00000360011 GAPVD1Q14C86 1478 aa18.84■□□□□ 0.61
RAI2-202ENST00000360011 ZNF608Q9ULD9 1512 aaPredicted RBP18.82■□□□□ 0.6
RAI2-202ENST00000360011 PBRM1Q86U86 1689 aa18.79■□□□□ 0.6
RAI2-202ENST00000360011 EIF4G3O43432 1585 aaKnown RBP18.79■□□□□ 0.6
RAI2-202ENST00000360011 CUL7Q14999 1698 aa18.78■□□□□ 0.6
RAI2-202ENST00000360011 AQRO60306 1485 aaKnown RBP eCLIP18.78■□□□□ 0.6
RAI2-202ENST00000360011 GRIN2BQ13224 1484 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms