RNA–Protein interactions for RNA: ENST00000359942.8

IPP-201, Transcript of intracisternal A particle-promoted polypeptide, humanhuman

TSL 1 (best)

Gene IPP, Length 1,947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPP-201ENST00000359942 NISCHQ9Y2I1 1504 aa18.91■□□□□ 0.62
IPP-201ENST00000359942 ABCC9O60706 1549 aa17.71■□□□□ 0.43
IPP-201ENST00000359942 CCDC180Q9P1Z9 1646 aa17.21■□□□□ 0.35
IPP-201ENST00000359942 DNAJC5BQ9UF47 199 aa17.11■□□□□ 0.33
IPP-201ENST00000359942 RB1CC1Q8TDY2 1594 aa16.64■□□□□ 0.25
IPP-201ENST00000359942 PABPN1Q86U42 306 aaKnown RBP eCLIP16.41■□□□□ 0.22
IPP-201ENST00000359942 NACADO15069 1562 aa16.4■□□□□ 0.22
IPP-201ENST00000359942 UNC13AQ9UPW8 1703 aa16.27■□□□□ 0.19
IPP-201ENST00000359942 DCAF8L2P0C7V8 631 aa16.18■□□□□ 0.18
IPP-201ENST00000359942 BICRAQ9NZM4 1560 aa16.18■□□□□ 0.18
IPP-201ENST00000359942 DNAJC5Q9H3Z4 198 aa16.14■□□□□ 0.17
IPP-201ENST00000359942 CECR2Q9BXF3 1484 aa16.03■□□□□ 0.16
IPP-201ENST00000359942 MYO15BQ96JP2 1530 aa16.01■□□□□ 0.15
IPP-201ENST00000359942 CC2D2AQ9P2K1 1620 aa15.99■□□□□ 0.15
IPP-201ENST00000359942 SHROOM4Q9ULL8 1493 aa15.92■□□□□ 0.14
IPP-201ENST00000359942 EIF4G1Q04637 1599 aaKnown RBP15.82■□□□□ 0.12
IPP-201ENST00000359942 SCRIBQ14160 1630 aa15.61■□□□□ 0.09
IPP-201ENST00000359942 DCAF1Q9Y4B6 1507 aa15.6■□□□□ 0.09
IPP-201ENST00000359942 ZCCHC6Q5VYS8 1495 aaKnown RBP15.54■□□□□ 0.08
IPP-201ENST00000359942 CUX2O14529 1486 aa15.52■□□□□ 0.07
IPP-201ENST00000359942 ERCC6Q03468 1493 aa15.34■□□□□ 0.05
IPP-201ENST00000359942 TRIM41Q8WV44 630 aa15.17■□□□□ 0.02
IPP-201ENST00000359942 NCAPD3P42695 1498 aa15.15■□□□□ 0.02
IPP-201ENST00000359942 NESP48681 1621 aa15.06■□□□□ 0
IPP-201ENST00000359942 THOC2Q8NI27 1593 aaKnown RBP15.02■□□□□ -0
IPP-201ENST00000359942 ATAD2BQ9ULI0 1458 aa15.02□□□□□ -0.01
IPP-201ENST00000359942 HMGXB3Q12766 1538 aa14.98□□□□□ -0.01
IPP-201ENST00000359942 SMARCA2P51531 1590 aa14.95□□□□□ -0.02
IPP-201ENST00000359942 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
IPP-201ENST00000359942 KIF21AQ7Z4S6 1674 aa14.86□□□□□ -0.03
IPP-201ENST00000359942 SMARCA4P51532 1647 aa14.86□□□□□ -0.03
IPP-201ENST00000359942 SUPT5HO00267 1087 aaKnown RBP14.84□□□□□ -0.03
IPP-201ENST00000359942 BAZ1BQ9UIG0 1483 aaKnown RBP14.83□□□□□ -0.03
IPP-201ENST00000359942 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.04
IPP-201ENST00000359942 BAZ1AQ9NRL2 1556 aaPredicted RBP14.74□□□□□ -0.05
IPP-201ENST00000359942 PEG3Q9GZU2 1588 aa14.73□□□□□ -0.05
IPP-201ENST00000359942 OSCARQ8IYS5 282 aa14.73□□□□□ -0.05
IPP-201ENST00000359942 MRC2Q9UBG0 1479 aa14.71□□□□□ -0.05
IPP-201ENST00000359942 WDR62O43379 1518 aa14.71□□□□□ -0.05
IPP-201ENST00000359942 CADPSQ9ULU8 1353 aa14.66□□□□□ -0.06
IPP-201ENST00000359942 RIMBP3CA6NJZ7 1639 aa14.57□□□□□ -0.08
IPP-201ENST00000359942 RIMBP3BA6NNM3 1639 aa14.57□□□□□ -0.08
IPP-201ENST00000359942 RIMBP3Q9UFD9 1639 aa14.57□□□□□ -0.08
IPP-201ENST00000359942 CHIC1Q5VXU3 224 aa14.56□□□□□ -0.08
IPP-201ENST00000359942 CEP164Q9UPV0 1460 aa14.55□□□□□ -0.08
IPP-201ENST00000359942 MROH2BQ7Z745 1585 aa14.55□□□□□ -0.08
IPP-201ENST00000359942 MYT1Q01538 1121 aa14.54□□□□□ -0.08
IPP-201ENST00000359942 PELP1Q8IZL8 1130 aaKnown RBP14.51□□□□□ -0.09
IPP-201ENST00000359942 FANCD2Q9BXW9 1451 aa14.49□□□□□ -0.09
IPP-201ENST00000359942 ARHGEF11O15085 1522 aa14.48□□□□□ -0.09
IPP-201ENST00000359942 TRHP20396 242 aaPredicted RBP14.41□□□□□ -0.1
IPP-201ENST00000359942 CYB5RLQ6IPT4 315 aa14.41□□□□□ -0.1
IPP-201ENST00000359942 AEBP2Q6ZN18 517 aaPredicted RBP14.4□□□□□ -0.1
IPP-201ENST00000359942 URB2Q14146 1524 aaKnown RBP14.4□□□□□ -0.1
IPP-201ENST00000359942 CFTRP13569 1480 aa14.38□□□□□ -0.11
IPP-201ENST00000359942 WIZO95785 1651 aa14.34□□□□□ -0.11
IPP-201ENST00000359942 ZNF608Q9ULD9 1512 aaPredicted RBP14.31□□□□□ -0.12
IPP-201ENST00000359942 ARAP1Q96P48 1450 aa14.28□□□□□ -0.12
IPP-201ENST00000359942 IFT140Q96RY7 1462 aa14.28□□□□□ -0.12
IPP-201ENST00000359942 RSF1Q96T23 1441 aaPredicted RBP14.22□□□□□ -0.13
IPP-201ENST00000359942 CHD1O14646 1710 aa14.2□□□□□ -0.14
IPP-201ENST00000359942 EIF4G3O43432 1585 aaKnown RBP14.2□□□□□ -0.14
IPP-201ENST00000359942 TTBK1Q5TCY1 1321 aaPredicted RBP14.19□□□□□ -0.14
IPP-201ENST00000359942 PRDM2Q13029 1718 aa14.19□□□□□ -0.14
IPP-201ENST00000359942 HRCP23327 699 aa14.17□□□□□ -0.14
IPP-201ENST00000359942 TOPBP1Q92547 1522 aa14.15□□□□□ -0.14
IPP-201ENST00000359942 FBLN2P98095 1184 aa14.13□□□□□ -0.15
IPP-201ENST00000359942 TOP2AP11388 1531 aaKnown RBP14.13□□□□□ -0.15
IPP-201ENST00000359942 AQRO60306 1485 aaKnown RBP eCLIP14.11□□□□□ -0.15
IPP-201ENST00000359942 ABCC8Q09428 1581 aa14.11□□□□□ -0.15
IPP-201ENST00000359942 TARBP1Q13395 1621 aaKnown RBP14.07□□□□□ -0.16
IPP-201ENST00000359942 DNMBPQ6XZF7 1577 aa14.05□□□□□ -0.16
IPP-201ENST00000359942 PCGF6Q9BYE7 350 aa14.04□□□□□ -0.16
IPP-201ENST00000359942 CLASP1Q7Z460 1538 aa14.03□□□□□ -0.16
IPP-201ENST00000359942 LOC105371045A0A1W2PR82 267 aa14□□□□□ -0.17
IPP-201ENST00000359942 CCDC88BA6NC98 1476 aa13.98□□□□□ -0.17
IPP-201ENST00000359942 SYNJ1O43426 1573 aa13.97□□□□□ -0.17
IPP-201ENST00000359942 POLA1P09884 1462 aaPredicted RBP13.97□□□□□ -0.17
IPP-201ENST00000359942 CHMP7Q8WUX9 453 aaPredicted RBP13.94□□□□□ -0.18
IPP-201ENST00000359942 SNAPC4Q5SXM2 1469 aa13.94□□□□□ -0.18
IPP-201ENST00000359942 TDRD9Q8NDG6 1382 aaKnown RBP13.94□□□□□ -0.18
IPP-201ENST00000359942 TRIM26Q12899 539 aaPredicted RBP13.93□□□□□ -0.18
IPP-201ENST00000359942 GAPVD1Q14C86 1478 aa13.92□□□□□ -0.18
IPP-201ENST00000359942 RAD54L2Q9Y4B4 1467 aa13.92□□□□□ -0.18
IPP-201ENST00000359942 WDR97A6NE52 1622 aa13.9□□□□□ -0.18
IPP-201ENST00000359942 MAGI1Q96QZ7 1491 aaPredicted RBP13.9□□□□□ -0.18
IPP-201ENST00000359942 SOGA1O94964 1423 aa13.9□□□□□ -0.18
IPP-201ENST00000359942 SYNJ2O15056 1496 aa13.86□□□□□ -0.19
IPP-201ENST00000359942 ILDR1Q86SU0 546 aaPredicted RBP13.86□□□□□ -0.19
IPP-201ENST00000359942 GRIN2BQ13224 1484 aa13.84□□□□□ -0.19
IPP-201ENST00000359942 SLC24A1O60721 1099 aa13.83□□□□□ -0.2
IPP-201ENST00000359942 FGD5Q6ZNL6 1462 aa13.8□□□□□ -0.2
IPP-201ENST00000359942 KIF13AQ9H1H9 1805 aa13.78□□□□□ -0.2
IPP-201ENST00000359942 ZEB1P37275 1124 aaPredicted RBP13.76□□□□□ -0.21
IPP-201ENST00000359942 ERCC6L2Q5T890 1561 aa13.75□□□□□ -0.21
IPP-201ENST00000359942 PBRM1Q86U86 1689 aa13.74□□□□□ -0.21
IPP-201ENST00000359942 KDM4FA0A1W2PPD8 638 aa13.72□□□□□ -0.21
IPP-201ENST00000359942 CUX1P39880 1505 aa13.7□□□□□ -0.22
IPP-201ENST00000359942 CEP170Q5SW79 1584 aa13.69□□□□□ -0.22
IPP-201ENST00000359942 GRIN2AQ12879 1464 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms