RNA–Protein interactions for RNA: ENST00000358864.1

TMC2-201, Transcript of transmembrane channel like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC2, Length 3,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC2-201ENST00000358864 NISCHQ9Y2I1 1504 aa26.14■■□□□ 1.78
TMC2-201ENST00000358864 CCDC180Q9P1Z9 1646 aa22.56■■□□□ 1.2
TMC2-201ENST00000358864 ZCCHC6Q5VYS8 1495 aaKnown RBP22.03■■□□□ 1.12
TMC2-201ENST00000358864 DCAF8L2P0C7V8 631 aa21.84■■□□□ 1.09
TMC2-201ENST00000358864 SHROOM4Q9ULL8 1493 aa21.68■■□□□ 1.06
TMC2-201ENST00000358864 DCAF1Q9Y4B6 1507 aa21.6■■□□□ 1.05
TMC2-201ENST00000358864 MYO15BQ96JP2 1530 aa21.2■□□□□ 0.98
TMC2-201ENST00000358864 SUPT5HO00267 1087 aaKnown RBP21.1■□□□□ 0.97
TMC2-201ENST00000358864 ABCC9O60706 1549 aa21.07■□□□□ 0.96
TMC2-201ENST00000358864 NACADO15069 1562 aa20.95■□□□□ 0.94
TMC2-201ENST00000358864 SCRIBQ14160 1630 aa20.84■□□□□ 0.93
TMC2-201ENST00000358864 RB1CC1Q8TDY2 1594 aa20.67■□□□□ 0.9
TMC2-201ENST00000358864 RSF1Q96T23 1441 aaPredicted RBP20.45■□□□□ 0.86
TMC2-201ENST00000358864 CECR2Q9BXF3 1484 aa20.33■□□□□ 0.85
TMC2-201ENST00000358864 UNC13AQ9UPW8 1703 aa20.32■□□□□ 0.84
TMC2-201ENST00000358864 CHIC1Q5VXU3 224 aa20.3■□□□□ 0.84
TMC2-201ENST00000358864 MROH2BQ7Z745 1585 aa20.24■□□□□ 0.83
TMC2-201ENST00000358864 HRCP23327 699 aa20.22■□□□□ 0.83
TMC2-201ENST00000358864 BAZ1AQ9NRL2 1556 aaPredicted RBP20.13■□□□□ 0.81
TMC2-201ENST00000358864 BICRAQ9NZM4 1560 aa20.12■□□□□ 0.81
TMC2-201ENST00000358864 WIZO95785 1651 aa20.08■□□□□ 0.81
TMC2-201ENST00000358864 PABPN1Q86U42 306 aaKnown RBP eCLIP20.07■□□□□ 0.8
TMC2-201ENST00000358864 SMARCA4P51532 1647 aa20■□□□□ 0.79
TMC2-201ENST00000358864 PPARGC1BQ86YN6 1023 aaKnown RBP19.95■□□□□ 0.78
TMC2-201ENST00000358864 PCGF6Q9BYE7 350 aa19.87■□□□□ 0.77
TMC2-201ENST00000358864 TOP2AP11388 1531 aaKnown RBP19.84■□□□□ 0.77
TMC2-201ENST00000358864 PEG3Q9GZU2 1588 aa19.76■□□□□ 0.75
TMC2-201ENST00000358864 TRIM41Q8WV44 630 aa19.7■□□□□ 0.74
TMC2-201ENST00000358864 SMARCA2P51531 1590 aa19.69■□□□□ 0.74
TMC2-201ENST00000358864 EIF4G1Q04637 1599 aaKnown RBP19.69■□□□□ 0.74
TMC2-201ENST00000358864 CCDC88BA6NC98 1476 aa19.69■□□□□ 0.74
TMC2-201ENST00000358864 ATAD2BQ9ULI0 1458 aa19.61■□□□□ 0.73
TMC2-201ENST00000358864 LOC105371045A0A1W2PR82 267 aa19.56■□□□□ 0.72
TMC2-201ENST00000358864 FAM9AQ8IZU1 332 aaPredicted RBP19.54■□□□□ 0.72
TMC2-201ENST00000358864 BAZ1BQ9UIG0 1483 aaKnown RBP19.48■□□□□ 0.71
TMC2-201ENST00000358864 EHMT2Q96KQ7 1210 aa19.44■□□□□ 0.7
TMC2-201ENST00000358864 ABCC8Q09428 1581 aa19.39■□□□□ 0.69
TMC2-201ENST00000358864 NCAPD3P42695 1498 aa19.37■□□□□ 0.69
TMC2-201ENST00000358864 HMGXB3Q12766 1538 aa19.34■□□□□ 0.69
TMC2-201ENST00000358864 PELP1Q8IZL8 1130 aaKnown RBP19.33■□□□□ 0.68
TMC2-201ENST00000358864 WRNQ14191 1432 aaPredicted RBP eCLIP19.2■□□□□ 0.66
TMC2-201ENST00000358864 SCAF1Q9H7N4 1312 aaKnown RBP19.2■□□□□ 0.66
TMC2-201ENST00000358864 TRIM26Q12899 539 aaPredicted RBP19.13■□□□□ 0.65
TMC2-201ENST00000358864 SOGA1O94964 1423 aa19.13■□□□□ 0.65
TMC2-201ENST00000358864 SYNJ1O43426 1573 aa19.12■□□□□ 0.65
TMC2-201ENST00000358864 EEA1Q15075 1411 aa19.08■□□□□ 0.65
TMC2-201ENST00000358864 CC2D2AQ9P2K1 1620 aa19.07■□□□□ 0.64
TMC2-201ENST00000358864 CFTRP13569 1480 aa19.05■□□□□ 0.64
TMC2-201ENST00000358864 RUSC2Q8N2Y8 1516 aa19.05■□□□□ 0.64
TMC2-201ENST00000358864 TOP2BQ02880 1626 aa19■□□□□ 0.63
TMC2-201ENST00000358864 CSRNP3Q8WYN3 585 aa19■□□□□ 0.63
TMC2-201ENST00000358864 BIVM-ERCC5R4GMW8 1640 aa18.96■□□□□ 0.63
TMC2-201ENST00000358864 CADPSQ9ULU8 1353 aa18.91■□□□□ 0.62
TMC2-201ENST00000358864 UBTFP17480 764 aaKnown RBP18.9■□□□□ 0.62
TMC2-201ENST00000358864 PRDM2Q13029 1718 aa18.9■□□□□ 0.62
TMC2-201ENST00000358864 TNIKQ9UKE5 1360 aa18.89■□□□□ 0.62
TMC2-201ENST00000358864 ZEB1P37275 1124 aaPredicted RBP18.89■□□□□ 0.61
TMC2-201ENST00000358864 CUX1P39880 1505 aa18.89■□□□□ 0.61
TMC2-201ENST00000358864 GOLGA3Q08378 1498 aa18.85■□□□□ 0.61
TMC2-201ENST00000358864 KIF21BO75037 1637 aa18.83■□□□□ 0.61
TMC2-201ENST00000358864 CEP164Q9UPV0 1460 aa18.81■□□□□ 0.6
TMC2-201ENST00000358864 CEP162Q5TB80 1403 aa18.81■□□□□ 0.6
TMC2-201ENST00000358864 RANGAP1P46060 587 aaPredicted RBP18.72■□□□□ 0.59
TMC2-201ENST00000358864 RAPGEF2Q9Y4G8 1499 aa18.7■□□□□ 0.58
TMC2-201ENST00000358864 FANCD2Q9BXW9 1451 aa18.68■□□□□ 0.58
TMC2-201ENST00000358864 PRXQ9BXM0 1461 aa18.68■□□□□ 0.58
TMC2-201ENST00000358864 NEUROD1Q13562 356 aa18.67■□□□□ 0.58
TMC2-201ENST00000358864 KIF27Q86VH2 1401 aa18.67■□□□□ 0.58
TMC2-201ENST00000358864 TTBK1Q5TCY1 1321 aaPredicted RBP18.66■□□□□ 0.58
TMC2-201ENST00000358864 ACIN1Q9UKV3 1341 aaKnown RBP18.65■□□□□ 0.58
TMC2-201ENST00000358864 NESP48681 1621 aa18.64■□□□□ 0.58
TMC2-201ENST00000358864 ERICH3Q5RHP9 1530 aa18.64■□□□□ 0.57
TMC2-201ENST00000358864 LAMC3Q9Y6N6 1575 aa18.61■□□□□ 0.57
TMC2-201ENST00000358864 FGD5Q6ZNL6 1462 aa18.6■□□□□ 0.57
TMC2-201ENST00000358864 DNAJC5BQ9UF47 199 aa18.6■□□□□ 0.57
TMC2-201ENST00000358864 CLIP1P30622 1438 aa18.58■□□□□ 0.56
TMC2-201ENST00000358864 DNMBPQ6XZF7 1577 aa18.56■□□□□ 0.56
TMC2-201ENST00000358864 GTF3C3Q9Y5Q9 886 aa18.54■□□□□ 0.56
TMC2-201ENST00000358864 CUX2O14529 1486 aa18.54■□□□□ 0.56
TMC2-201ENST00000358864 TOPBP1Q92547 1522 aa18.53■□□□□ 0.56
TMC2-201ENST00000358864 IGF1RP08069 1367 aa18.53■□□□□ 0.56
TMC2-201ENST00000358864 MYT1Q01538 1121 aa18.5■□□□□ 0.55
TMC2-201ENST00000358864 POLA1P09884 1462 aaPredicted RBP18.47■□□□□ 0.55
TMC2-201ENST00000358864 VPS8Q8N3P4 1428 aa18.47■□□□□ 0.55
TMC2-201ENST00000358864 PDS5BQ9NTI5 1447 aa18.46■□□□□ 0.55
TMC2-201ENST00000358864 APLP2Q06481 763 aa18.45■□□□□ 0.54
TMC2-201ENST00000358864 URB2Q14146 1524 aaKnown RBP18.45■□□□□ 0.54
TMC2-201ENST00000358864 ABCA10Q8WWZ4 1543 aa18.45■□□□□ 0.54
TMC2-201ENST00000358864 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.44■□□□□ 0.54
TMC2-201ENST00000358864 RAD54L2Q9Y4B4 1467 aa18.43■□□□□ 0.54
TMC2-201ENST00000358864 CARMIL1Q5VZK9 1371 aa18.4■□□□□ 0.54
TMC2-201ENST00000358864 KIF21AQ7Z4S6 1674 aa18.38■□□□□ 0.53
TMC2-201ENST00000358864 ARAP1Q96P48 1450 aa18.37■□□□□ 0.53
TMC2-201ENST00000358864 DIEXFQ68CQ4 756 aaKnown RBP18.34■□□□□ 0.53
TMC2-201ENST00000358864 WDR97A6NE52 1622 aa18.34■□□□□ 0.53
TMC2-201ENST00000358864 CENPBP07199 599 aaPredicted RBP18.34■□□□□ 0.53
TMC2-201ENST00000358864 CCER1Q8TC90 406 aaPredicted RBP18.33■□□□□ 0.53
TMC2-201ENST00000358864 ARHGAP35Q9NRY4 1499 aa18.31■□□□□ 0.52
TMC2-201ENST00000358864 CUL7Q14999 1698 aa18.26■□□□□ 0.51
TMC2-201ENST00000358864 ABCA5Q8WWZ7 1642 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms