RNA–Protein interactions for RNA: ENST00000358007.7

DDX47-202, Transcript of DEAD-box helicase 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX47, Length 1,817 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-202ENST00000358007 NISCHQ9Y2I1 1504 aa22.83■■□□□ 1.25
DDX47-202ENST00000358007 CCDC180Q9P1Z9 1646 aa19.68■□□□□ 0.74
DDX47-202ENST00000358007 ZCCHC6Q5VYS8 1495 aaKnown RBP19.28■□□□□ 0.68
DDX47-202ENST00000358007 SHROOM4Q9ULL8 1493 aa18.94■□□□□ 0.62
DDX47-202ENST00000358007 DCAF1Q9Y4B6 1507 aa18.87■□□□□ 0.61
DDX47-202ENST00000358007 DCAF8L2P0C7V8 631 aa18.75■□□□□ 0.59
DDX47-202ENST00000358007 MYO15BQ96JP2 1530 aa18.5■□□□□ 0.55
DDX47-202ENST00000358007 SUPT5HO00267 1087 aaKnown RBP18.42■□□□□ 0.54
DDX47-202ENST00000358007 ABCC9O60706 1549 aa18.32■□□□□ 0.52
DDX47-202ENST00000358007 NACADO15069 1562 aa18.27■□□□□ 0.51
DDX47-202ENST00000358007 SCRIBQ14160 1630 aa18.2■□□□□ 0.5
DDX47-202ENST00000358007 RB1CC1Q8TDY2 1594 aa18.01■□□□□ 0.47
DDX47-202ENST00000358007 RSF1Q96T23 1441 aaPredicted RBP17.88■□□□□ 0.45
DDX47-202ENST00000358007 CHIC1Q5VXU3 224 aa17.83■□□□□ 0.44
DDX47-202ENST00000358007 CECR2Q9BXF3 1484 aa17.72■□□□□ 0.43
DDX47-202ENST00000358007 MROH2BQ7Z745 1585 aa17.66■□□□□ 0.42
DDX47-202ENST00000358007 UNC13AQ9UPW8 1703 aa17.61■□□□□ 0.41
DDX47-202ENST00000358007 BAZ1AQ9NRL2 1556 aaPredicted RBP17.6■□□□□ 0.41
DDX47-202ENST00000358007 WIZO95785 1651 aa17.51■□□□□ 0.39
DDX47-202ENST00000358007 BICRAQ9NZM4 1560 aa17.46■□□□□ 0.39
DDX47-202ENST00000358007 SMARCA4P51532 1647 aa17.46■□□□□ 0.39
DDX47-202ENST00000358007 PABPN1Q86U42 306 aaKnown RBP eCLIP17.37■□□□□ 0.37
DDX47-202ENST00000358007 TOP2AP11388 1531 aaKnown RBP17.37■□□□□ 0.37
DDX47-202ENST00000358007 TRIM41Q8WV44 630 aa17.28■□□□□ 0.36
DDX47-202ENST00000358007 EIF4G1Q04637 1599 aaKnown RBP17.23■□□□□ 0.35
DDX47-202ENST00000358007 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
DDX47-202ENST00000358007 SMARCA2P51531 1590 aa17.2■□□□□ 0.34
DDX47-202ENST00000358007 CCDC88BA6NC98 1476 aa17.2■□□□□ 0.34
DDX47-202ENST00000358007 LOC105371045A0A1W2PR82 267 aa17.16■□□□□ 0.34
DDX47-202ENST00000358007 ATAD2BQ9ULI0 1458 aa17.1■□□□□ 0.33
DDX47-202ENST00000358007 BAZ1BQ9UIG0 1483 aaKnown RBP17.02■□□□□ 0.32
DDX47-202ENST00000358007 FAM9AQ8IZU1 332 aaPredicted RBP16.98■□□□□ 0.31
DDX47-202ENST00000358007 ABCC8Q09428 1581 aa16.96■□□□□ 0.31
DDX47-202ENST00000358007 HMGXB3Q12766 1538 aa16.88■□□□□ 0.29
DDX47-202ENST00000358007 NCAPD3P42695 1498 aa16.87■□□□□ 0.29
DDX47-202ENST00000358007 WRNQ14191 1432 aaPredicted RBP eCLIP16.83■□□□□ 0.28
DDX47-202ENST00000358007 PCGF6Q9BYE7 350 aa16.81■□□□□ 0.28
DDX47-202ENST00000358007 EEA1Q15075 1411 aa16.79■□□□□ 0.28
DDX47-202ENST00000358007 SOGA1O94964 1423 aa16.74■□□□□ 0.27
DDX47-202ENST00000358007 EHMT2Q96KQ7 1210 aa16.73■□□□□ 0.27
DDX47-202ENST00000358007 SYNJ1O43426 1573 aa16.72■□□□□ 0.27
DDX47-202ENST00000358007 TRIM26Q12899 539 aaPredicted RBP16.7■□□□□ 0.26
DDX47-202ENST00000358007 CSRNP3Q8WYN3 585 aa16.66■□□□□ 0.26
DDX47-202ENST00000358007 HRCP23327 699 aa16.65■□□□□ 0.26
DDX47-202ENST00000358007 RUSC2Q8N2Y8 1516 aa16.64■□□□□ 0.25
DDX47-202ENST00000358007 TOP2BQ02880 1626 aa16.61■□□□□ 0.25
DDX47-202ENST00000358007 CFTRP13569 1480 aa16.61■□□□□ 0.25
DDX47-202ENST00000358007 TNIKQ9UKE5 1360 aa16.6■□□□□ 0.25
DDX47-202ENST00000358007 GOLGA3Q08378 1498 aa16.58■□□□□ 0.25
DDX47-202ENST00000358007 BIVM-ERCC5R4GMW8 1640 aa16.58■□□□□ 0.24
DDX47-202ENST00000358007 CC2D2AQ9P2K1 1620 aa16.56■□□□□ 0.24
DDX47-202ENST00000358007 CEP162Q5TB80 1403 aa16.55■□□□□ 0.24
DDX47-202ENST00000358007 CEP164Q9UPV0 1460 aa16.54■□□□□ 0.24
DDX47-202ENST00000358007 KIF21BO75037 1637 aa16.53■□□□□ 0.24
DDX47-202ENST00000358007 CUX1P39880 1505 aa16.49■□□□□ 0.23
DDX47-202ENST00000358007 UBTFP17480 764 aaKnown RBP16.49■□□□□ 0.23
DDX47-202ENST00000358007 CADPSQ9ULU8 1353 aa16.48■□□□□ 0.23
DDX47-202ENST00000358007 PRDM2Q13029 1718 aa16.48■□□□□ 0.23
DDX47-202ENST00000358007 RAPGEF2Q9Y4G8 1499 aa16.39■□□□□ 0.21
DDX47-202ENST00000358007 KIF27Q86VH2 1401 aa16.36■□□□□ 0.21
DDX47-202ENST00000358007 ERICH3Q5RHP9 1530 aa16.35■□□□□ 0.21
DDX47-202ENST00000358007 PRXQ9BXM0 1461 aa16.35■□□□□ 0.21
DDX47-202ENST00000358007 CLIP1P30622 1438 aa16.33■□□□□ 0.21
DDX47-202ENST00000358007 PPARGC1BQ86YN6 1023 aaKnown RBP16.33■□□□□ 0.2
DDX47-202ENST00000358007 FANCD2Q9BXW9 1451 aa16.31■□□□□ 0.2
DDX47-202ENST00000358007 FGD5Q6ZNL6 1462 aa16.25■□□□□ 0.19
DDX47-202ENST00000358007 VPS8Q8N3P4 1428 aa16.25■□□□□ 0.19
DDX47-202ENST00000358007 ZEB1P37275 1124 aaPredicted RBP16.24■□□□□ 0.19
DDX47-202ENST00000358007 CUX2O14529 1486 aa16.23■□□□□ 0.19
DDX47-202ENST00000358007 LAMC3Q9Y6N6 1575 aa16.22■□□□□ 0.19
DDX47-202ENST00000358007 DNMBPQ6XZF7 1577 aa16.21■□□□□ 0.19
DDX47-202ENST00000358007 NESP48681 1621 aa16.2■□□□□ 0.18
DDX47-202ENST00000358007 IGF1RP08069 1367 aa16.17■□□□□ 0.18
DDX47-202ENST00000358007 TOPBP1Q92547 1522 aa16.16■□□□□ 0.18
DDX47-202ENST00000358007 TTBK1Q5TCY1 1321 aaPredicted RBP16.14■□□□□ 0.17
DDX47-202ENST00000358007 POLA1P09884 1462 aaPredicted RBP16.12■□□□□ 0.17
DDX47-202ENST00000358007 ABCA10Q8WWZ4 1543 aa16.12■□□□□ 0.17
DDX47-202ENST00000358007 ARAP1Q96P48 1450 aa16.11■□□□□ 0.17
DDX47-202ENST00000358007 PDS5BQ9NTI5 1447 aa16.11■□□□□ 0.17
DDX47-202ENST00000358007 CARMIL1Q5VZK9 1371 aa16.1■□□□□ 0.17
DDX47-202ENST00000358007 RANGAP1P46060 587 aaPredicted RBP16.1■□□□□ 0.17
DDX47-202ENST00000358007 APLP2Q06481 763 aa16.1■□□□□ 0.17
DDX47-202ENST00000358007 RAD54L2Q9Y4B4 1467 aa16.07■□□□□ 0.16
DDX47-202ENST00000358007 URB2Q14146 1524 aaKnown RBP16.07■□□□□ 0.16
DDX47-202ENST00000358007 DNAJC5BQ9UF47 199 aa16.04■□□□□ 0.16
DDX47-202ENST00000358007 ARHGAP35Q9NRY4 1499 aa16.04■□□□□ 0.16
DDX47-202ENST00000358007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.99■□□□□ 0.15
DDX47-202ENST00000358007 WDR97A6NE52 1622 aa15.99■□□□□ 0.15
DDX47-202ENST00000358007 CUL7Q14999 1698 aa15.99■□□□□ 0.15
DDX47-202ENST00000358007 CCER1Q8TC90 406 aaPredicted RBP15.98■□□□□ 0.15
DDX47-202ENST00000358007 KIF21AQ7Z4S6 1674 aa15.97■□□□□ 0.15
DDX47-202ENST00000358007 ABCA5Q8WWZ7 1642 aa15.93■□□□□ 0.14
DDX47-202ENST00000358007 GAPVD1Q14C86 1478 aa15.9■□□□□ 0.14
DDX47-202ENST00000358007 TDRD9Q8NDG6 1382 aaKnown RBP15.88■□□□□ 0.13
DDX47-202ENST00000358007 MRC2Q9UBG0 1479 aa15.88■□□□□ 0.13
DDX47-202ENST00000358007 KANK4Q5T7N3 995 aaPredicted RBP15.87■□□□□ 0.13
DDX47-202ENST00000358007 FHAD1B1AJZ9 1412 aa15.87■□□□□ 0.13
DDX47-202ENST00000358007 EFCAB5A4FU69 1503 aa15.87■□□□□ 0.13
DDX47-202ENST00000358007 MAP3K1Q13233 1512 aa15.87■□□□□ 0.13
DDX47-202ENST00000358007 TARBP1Q13395 1621 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 220.5 ms