RNA–Protein interactions for RNA: ENST00000357884.8

C19orf47-201, Transcript of chromosome 19 open reading frame 47, humanhuman

TSL 5

Gene C19orf47, Length 1,774 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-201ENST00000357884 NISCHQ9Y2I1 1504 aa37.77■■■■□ 3.64
C19orf47-201ENST00000357884 CCDC180Q9P1Z9 1646 aa32.99■■■□□ 2.87
C19orf47-201ENST00000357884 ABCC9O60706 1549 aa31.84■■■□□ 2.69
C19orf47-201ENST00000357884 ZCCHC6Q5VYS8 1495 aaKnown RBP31.77■■■□□ 2.68
C19orf47-201ENST00000357884 DCAF8L2P0C7V8 631 aa31.38■■■□□ 2.61
C19orf47-201ENST00000357884 DCAF1Q9Y4B6 1507 aa31.33■■■□□ 2.61
C19orf47-201ENST00000357884 MYO15BQ96JP2 1530 aa30.96■■■□□ 2.55
C19orf47-201ENST00000357884 NACADO15069 1562 aa30.9■■■□□ 2.54
C19orf47-201ENST00000357884 RB1CC1Q8TDY2 1594 aa30.81■■■□□ 2.52
C19orf47-201ENST00000357884 SHROOM4Q9ULL8 1493 aa30.69■■■□□ 2.5
C19orf47-201ENST00000357884 SCRIBQ14160 1630 aa30.3■■■□□ 2.44
C19orf47-201ENST00000357884 UNC13AQ9UPW8 1703 aa30.14■■■□□ 2.42
C19orf47-201ENST00000357884 PABPN1Q86U42 306 aaKnown RBP eCLIP29.95■■■□□ 2.38
C19orf47-201ENST00000357884 BICRAQ9NZM4 1560 aa29.85■■■□□ 2.37
C19orf47-201ENST00000357884 SUPT5HO00267 1087 aaKnown RBP29.6■■■□□ 2.33
C19orf47-201ENST00000357884 RSF1Q96T23 1441 aaPredicted RBP29.31■■■□□ 2.28
C19orf47-201ENST00000357884 CECR2Q9BXF3 1484 aa29.27■■■□□ 2.28
C19orf47-201ENST00000357884 BAZ1AQ9NRL2 1556 aaPredicted RBP29.18■■■□□ 2.26
C19orf47-201ENST00000357884 MROH2BQ7Z745 1585 aa29.13■■■□□ 2.25
C19orf47-201ENST00000357884 EIF4G1Q04637 1599 aaKnown RBP29.03■■■□□ 2.24
C19orf47-201ENST00000357884 SMARCA4P51532 1647 aa29■■■□□ 2.23
C19orf47-201ENST00000357884 WIZO95785 1651 aa28.85■■■□□ 2.21
C19orf47-201ENST00000357884 CHIC1Q5VXU3 224 aa28.81■■■□□ 2.2
C19orf47-201ENST00000357884 CC2D2AQ9P2K1 1620 aa28.77■■■□□ 2.2
C19orf47-201ENST00000357884 PEG3Q9GZU2 1588 aa28.71■■■□□ 2.19
C19orf47-201ENST00000357884 ATAD2BQ9ULI0 1458 aa28.67■■■□□ 2.18
C19orf47-201ENST00000357884 DNAJC5BQ9UF47 199 aa28.67■■■□□ 2.18
C19orf47-201ENST00000357884 TOP2AP11388 1531 aaKnown RBP28.66■■■□□ 2.18
C19orf47-201ENST00000357884 SMARCA2P51531 1590 aa28.64■■■□□ 2.18
C19orf47-201ENST00000357884 NCAPD3P42695 1498 aa28.53■■■□□ 2.16
C19orf47-201ENST00000357884 BAZ1BQ9UIG0 1483 aaKnown RBP28.49■■■□□ 2.15
C19orf47-201ENST00000357884 HMGXB3Q12766 1538 aa28.41■■■□□ 2.14
C19orf47-201ENST00000357884 CCDC88BA6NC98 1476 aa28.33■■■□□ 2.13
C19orf47-201ENST00000357884 TRIM41Q8WV44 630 aa27.91■■■□□ 2.06
C19orf47-201ENST00000357884 CADPSQ9ULU8 1353 aa27.78■■■□□ 2.04
C19orf47-201ENST00000357884 NESP48681 1621 aa27.75■■■□□ 2.03
C19orf47-201ENST00000357884 CFTRP13569 1480 aa27.72■■■□□ 2.03
C19orf47-201ENST00000357884 ABCC8Q09428 1581 aa27.68■■■□□ 2.02
C19orf47-201ENST00000357884 LAMC3Q9Y6N6 1575 aa27.67■■■□□ 2.02
C19orf47-201ENST00000357884 LOC105371045A0A1W2PR82 267 aa27.65■■■□□ 2.02
C19orf47-201ENST00000357884 WRNQ14191 1432 aaPredicted RBP eCLIP27.61■■■□□ 2.01
C19orf47-201ENST00000357884 PRDM2Q13029 1718 aa27.52■■■□□ 2
C19orf47-201ENST00000357884 PDS5BQ9NTI5 1447 aa27.51■■□□□ 1.99
C19orf47-201ENST00000357884 FANCD2Q9BXW9 1451 aa27.47■■□□□ 1.99
C19orf47-201ENST00000357884 SYNJ1O43426 1573 aa27.42■■□□□ 1.98
C19orf47-201ENST00000357884 HRCP23327 699 aa27.41■■□□□ 1.98
C19orf47-201ENST00000357884 KIF21AQ7Z4S6 1674 aa27.39■■□□□ 1.97
C19orf47-201ENST00000357884 ERCC6Q03468 1493 aa27.38■■□□□ 1.97
C19orf47-201ENST00000357884 TOP2BQ02880 1626 aa27.37■■□□□ 1.97
C19orf47-201ENST00000357884 CEP164Q9UPV0 1460 aa27.36■■□□□ 1.97
C19orf47-201ENST00000357884 PCGF6Q9BYE7 350 aa27.35■■□□□ 1.97
C19orf47-201ENST00000357884 EEA1Q15075 1411 aa27.33■■□□□ 1.97
C19orf47-201ENST00000357884 BIVM-ERCC5R4GMW8 1640 aa27.33■■□□□ 1.97
C19orf47-201ENST00000357884 FAM9AQ8IZU1 332 aaPredicted RBP27.28■■□□□ 1.96
C19orf47-201ENST00000357884 TRIM26Q12899 539 aaPredicted RBP27.25■■□□□ 1.95
C19orf47-201ENST00000357884 CUX1P39880 1505 aa27.24■■□□□ 1.95
C19orf47-201ENST00000357884 SOGA1O94964 1423 aa27.21■■□□□ 1.95
C19orf47-201ENST00000357884 MRC2Q9UBG0 1479 aa27.16■■□□□ 1.94
C19orf47-201ENST00000357884 URB2Q14146 1524 aaKnown RBP27.14■■□□□ 1.94
C19orf47-201ENST00000357884 TOPBP1Q92547 1522 aa27.09■■□□□ 1.93
C19orf47-201ENST00000357884 CSRNP3Q8WYN3 585 aa27.08■■□□□ 1.93
C19orf47-201ENST00000357884 DNMBPQ6XZF7 1577 aa27.08■■□□□ 1.93
C19orf47-201ENST00000357884 THOC2Q8NI27 1593 aaKnown RBP27.06■■□□□ 1.92
C19orf47-201ENST00000357884 RUSC2Q8N2Y8 1516 aa27.06■■□□□ 1.92
C19orf47-201ENST00000357884 WDR62O43379 1518 aa27.01■■□□□ 1.91
C19orf47-201ENST00000357884 FGD5Q6ZNL6 1462 aa26.95■■□□□ 1.91
C19orf47-201ENST00000357884 KIF27Q86VH2 1401 aa26.93■■□□□ 1.9
C19orf47-201ENST00000357884 POLA1P09884 1462 aaPredicted RBP26.91■■□□□ 1.9
C19orf47-201ENST00000357884 KIF21BO75037 1637 aa26.9■■□□□ 1.9
C19orf47-201ENST00000357884 GOLGA3Q08378 1498 aa26.89■■□□□ 1.89
C19orf47-201ENST00000357884 RAD54L2Q9Y4B4 1467 aa26.84■■□□□ 1.89
C19orf47-201ENST00000357884 TNIKQ9UKE5 1360 aa26.83■■□□□ 1.89
C19orf47-201ENST00000357884 CUX2O14529 1486 aa26.81■■□□□ 1.88
C19orf47-201ENST00000357884 EHMT2Q96KQ7 1210 aa26.81■■□□□ 1.88
C19orf47-201ENST00000357884 ABCA10Q8WWZ4 1543 aa26.76■■□□□ 1.87
C19orf47-201ENST00000357884 PRXQ9BXM0 1461 aa26.76■■□□□ 1.87
C19orf47-201ENST00000357884 ERICH3Q5RHP9 1530 aa26.74■■□□□ 1.87
C19orf47-201ENST00000357884 IFT140Q96RY7 1462 aa26.73■■□□□ 1.87
C19orf47-201ENST00000357884 TARBP1Q13395 1621 aaKnown RBP26.71■■□□□ 1.87
C19orf47-201ENST00000357884 ZEB1P37275 1124 aaPredicted RBP26.71■■□□□ 1.87
C19orf47-201ENST00000357884 UBTFP17480 764 aaKnown RBP26.69■■□□□ 1.86
C19orf47-201ENST00000357884 RAPGEF2Q9Y4G8 1499 aa26.68■■□□□ 1.86
C19orf47-201ENST00000357884 TDRD9Q8NDG6 1382 aaKnown RBP26.66■■□□□ 1.86
C19orf47-201ENST00000357884 CEP162Q5TB80 1403 aa26.65■■□□□ 1.86
C19orf47-201ENST00000357884 IGF1RP08069 1367 aa26.64■■□□□ 1.86
C19orf47-201ENST00000357884 ZNF608Q9ULD9 1512 aaPredicted RBP26.62■■□□□ 1.85
C19orf47-201ENST00000357884 WDR97A6NE52 1622 aa26.61■■□□□ 1.85
C19orf47-201ENST00000357884 AQRO60306 1485 aaKnown RBP eCLIP26.59■■□□□ 1.852e-6■■■■■ 30.8
C19orf47-201ENST00000357884 GAPVD1Q14C86 1478 aa26.53■■□□□ 1.84
C19orf47-201ENST00000357884 CARMIL1Q5VZK9 1371 aa26.52■■□□□ 1.84
C19orf47-201ENST00000357884 ABCA5Q8WWZ7 1642 aa26.51■■□□□ 1.83
C19orf47-201ENST00000357884 EIF4G3O43432 1585 aaKnown RBP26.49■■□□□ 1.83
C19orf47-201ENST00000357884 CUL7Q14999 1698 aa26.46■■□□□ 1.83
C19orf47-201ENST00000357884 PPARGC1BQ86YN6 1023 aaKnown RBP26.46■■□□□ 1.83
C19orf47-201ENST00000357884 CLIP1P30622 1438 aa26.43■■□□□ 1.82
C19orf47-201ENST00000357884 GRIN2BQ13224 1484 aa26.41■■□□□ 1.82
C19orf47-201ENST00000357884 PBRM1Q86U86 1689 aa26.39■■□□□ 1.82
C19orf47-201ENST00000357884 SNAPC4Q5SXM2 1469 aa26.31■■□□□ 1.8
C19orf47-201ENST00000357884 FBLN2P98095 1184 aa26.25■■□□□ 1.79
C19orf47-201ENST00000357884 MAGI1Q96QZ7 1491 aaPredicted RBP26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms