RNA–Protein interactions for RNA: ENST00000357596.7

PHF11-201, Transcript of PHD finger protein 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PHF11, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-201ENST00000357596 AEBP2Q6ZN18 517 aaPredicted RBP21.4■■□□□ 1.02
PHF11-201ENST00000357596 CHIC1Q5VXU3 224 aa20.04■□□□□ 0.8
PHF11-201ENST00000357596 SENP3Q9H4L4 574 aaPredicted RBP18.48■□□□□ 0.55
PHF11-201ENST00000357596 POTEDQ86YR6 584 aa18.16■□□□□ 0.5
PHF11-201ENST00000357596 PHF23Q9BUL5 403 aaPredicted RBP18.07■□□□□ 0.48
PHF11-201ENST00000357596 NISCHQ9Y2I1 1504 aa17.51■□□□□ 0.39
PHF11-201ENST00000357596 FOXD1Q16676 465 aa17.33■□□□□ 0.37
PHF11-201ENST00000357596 MSH5O43196 834 aa16.69■□□□□ 0.26
PHF11-201ENST00000357596 PIAS4Q8N2W9 510 aaPredicted RBP15.92■□□□□ 0.14
PHF11-201ENST00000357596 CCDC180Q9P1Z9 1646 aa15.63■□□□□ 0.09
PHF11-201ENST00000357596 PPP6R1Q9UPN7 881 aa15.33■□□□□ 0.05
PHF11-201ENST00000357596 ABCC9O60706 1549 aa15.22■□□□□ 0.03
PHF11-201ENST00000357596 ADRA2BP18089 450 aa15.21■□□□□ 0.03
PHF11-201ENST00000357596 CACNB1Q02641 598 aaPredicted RBP14.99□□□□□ -0.01
PHF11-201ENST00000357596 PLPPR3Q6T4P5 718 aa14.91□□□□□ -0.02
PHF11-201ENST00000357596 RB1CC1Q8TDY2 1594 aa14.69□□□□□ -0.06
PHF11-201ENST00000357596 NACADO15069 1562 aa14.67□□□□□ -0.06
PHF11-201ENST00000357596 ZCCHC6Q5VYS8 1495 aaKnown RBP14.61□□□□□ -0.07
PHF11-201ENST00000357596 MYO15BQ96JP2 1530 aa14.58□□□□□ -0.07
PHF11-201ENST00000357596 DCAF8L2P0C7V8 631 aa14.55□□□□□ -0.08
PHF11-201ENST00000357596 DCAF1Q9Y4B6 1507 aa14.52□□□□□ -0.09
PHF11-201ENST00000357596 DMRT2Q9Y5R5 561 aa14.48□□□□□ -0.09
PHF11-201ENST00000357596 UNC13AQ9UPW8 1703 aa14.31□□□□□ -0.12
PHF11-201ENST00000357596 MAPK8IP2Q13387 824 aaPredicted RBP14.31□□□□□ -0.12
PHF11-201ENST00000357596 SCRIBQ14160 1630 aa14.22□□□□□ -0.13
PHF11-201ENST00000357596 BICRAQ9NZM4 1560 aa14.2□□□□□ -0.14
PHF11-201ENST00000357596 PABPN1Q86U42 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
PHF11-201ENST00000357596 SHROOM4Q9ULL8 1493 aa14.14□□□□□ -0.15
PHF11-201ENST00000357596 RNF39Q9H2S5 420 aa14.12□□□□□ -0.15
PHF11-201ENST00000357596 POTEHQ6S545 545 aa14.02□□□□□ -0.16
PHF11-201ENST00000357596 SCAF1Q9H7N4 1312 aaKnown RBP13.99□□□□□ -0.17
PHF11-201ENST00000357596 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
PHF11-201ENST00000357596 C1QBPQ07021 282 aaKnown RBP13.87□□□□□ -0.19
PHF11-201ENST00000357596 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
PHF11-201ENST00000357596 EIF4G1Q04637 1599 aaKnown RBP13.85□□□□□ -0.19
PHF11-201ENST00000357596 CC2D2AQ9P2K1 1620 aa13.78□□□□□ -0.2
PHF11-201ENST00000357596 CECR2Q9BXF3 1484 aa13.69□□□□□ -0.22
PHF11-201ENST00000357596 SMARCA4P51532 1647 aa13.61□□□□□ -0.23
PHF11-201ENST00000357596 BAZ1AQ9NRL2 1556 aaPredicted RBP13.6□□□□□ -0.23
PHF11-201ENST00000357596 SMARCA2P51531 1590 aa13.53□□□□□ -0.24
PHF11-201ENST00000357596 ATAD2BQ9ULI0 1458 aa13.51□□□□□ -0.25
PHF11-201ENST00000357596 HOXD11P31277 338 aaPredicted RBP13.5□□□□□ -0.25
PHF11-201ENST00000357596 NCAPD3P42695 1498 aa13.49□□□□□ -0.25
PHF11-201ENST00000357596 HMGXB3Q12766 1538 aa13.48□□□□□ -0.25
PHF11-201ENST00000357596 MROH2BQ7Z745 1585 aa13.48□□□□□ -0.25
PHF11-201ENST00000357596 PEG3Q9GZU2 1588 aa13.47□□□□□ -0.25
PHF11-201ENST00000357596 BAZ1BQ9UIG0 1483 aaKnown RBP13.42□□□□□ -0.26
PHF11-201ENST00000357596 WIZO95785 1651 aa13.33□□□□□ -0.28
PHF11-201ENST00000357596 RSF1Q96T23 1441 aaPredicted RBP13.31□□□□□ -0.28
PHF11-201ENST00000357596 TOP2AP11388 1531 aaKnown RBP13.24□□□□□ -0.29
PHF11-201ENST00000357596 LAMC3Q9Y6N6 1575 aa13.18□□□□□ -0.3
PHF11-201ENST00000357596 ERCC6Q03468 1493 aa13.16□□□□□ -0.3
PHF11-201ENST00000357596 NESP48681 1621 aa13.15□□□□□ -0.3
PHF11-201ENST00000357596 RNF216Q9NWF9 866 aaPredicted RBP13.1□□□□□ -0.31
PHF11-201ENST00000357596 CADPSQ9ULU8 1353 aa13.1□□□□□ -0.31
PHF11-201ENST00000357596 PDS5BQ9NTI5 1447 aa13.07□□□□□ -0.32
PHF11-201ENST00000357596 KIF21AQ7Z4S6 1674 aa13.03□□□□□ -0.32
PHF11-201ENST00000357596 CCDC88BA6NC98 1476 aa13.03□□□□□ -0.32
PHF11-201ENST00000357596 CFTRP13569 1480 aa13.03□□□□□ -0.32
PHF11-201ENST00000357596 CUX2O14529 1486 aa13.02□□□□□ -0.32
PHF11-201ENST00000357596 THOC2Q8NI27 1593 aaKnown RBP13.02□□□□□ -0.33
PHF11-201ENST00000357596 PRDM2Q13029 1718 aa12.98□□□□□ -0.33
PHF11-201ENST00000357596 CEP164Q9UPV0 1460 aa12.98□□□□□ -0.33
PHF11-201ENST00000357596 FANCD2Q9BXW9 1451 aa12.97□□□□□ -0.33
PHF11-201ENST00000357596 MRC2Q9UBG0 1479 aa12.96□□□□□ -0.34
PHF11-201ENST00000357596 CNKSR2Q8WXI2 1034 aa12.94□□□□□ -0.34
PHF11-201ENST00000357596 SUPT5HO00267 1087 aaKnown RBP12.93□□□□□ -0.34
PHF11-201ENST00000357596 WDR62O43379 1518 aa12.91□□□□□ -0.34
PHF11-201ENST00000357596 PPP4R3CPQ6ZMV5 832 aa12.91□□□□□ -0.34
PHF11-201ENST00000357596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.87□□□□□ -0.35
PHF11-201ENST00000357596 DSG3P32926 999 aa12.84□□□□□ -0.35
PHF11-201ENST00000357596 URB2Q14146 1524 aaKnown RBP12.83□□□□□ -0.36
PHF11-201ENST00000357596 ABCC8Q09428 1581 aa12.78□□□□□ -0.36
PHF11-201ENST00000357596 DNMBPQ6XZF7 1577 aa12.77□□□□□ -0.37
PHF11-201ENST00000357596 TOPBP1Q92547 1522 aa12.76□□□□□ -0.37
PHF11-201ENST00000357596 IFT140Q96RY7 1462 aa12.69□□□□□ -0.38
PHF11-201ENST00000357596 CUX1P39880 1505 aa12.66□□□□□ -0.38
PHF11-201ENST00000357596 POLA1P09884 1462 aaPredicted RBP12.65□□□□□ -0.38
PHF11-201ENST00000357596 CAPN15O75808 1086 aa12.65□□□□□ -0.38
PHF11-201ENST00000357596 FGD5Q6ZNL6 1462 aa12.63□□□□□ -0.39
PHF11-201ENST00000357596 TARBP1Q13395 1621 aaKnown RBP12.62□□□□□ -0.39
PHF11-201ENST00000357596 SP7Q8TDD2 431 aaPredicted RBP12.62□□□□□ -0.39
PHF11-201ENST00000357596 ZNF608Q9ULD9 1512 aaPredicted RBP12.6□□□□□ -0.39
PHF11-201ENST00000357596 EIF4G3O43432 1585 aaKnown RBP12.6□□□□□ -0.39
PHF11-201ENST00000357596 SPINK5Q9NQ38 1064 aaPredicted RBP12.59□□□□□ -0.39
PHF11-201ENST00000357596 WDR97A6NE52 1622 aa12.58□□□□□ -0.4
PHF11-201ENST00000357596 SOGA1O94964 1423 aa12.58□□□□□ -0.4
PHF11-201ENST00000357596 WRNQ14191 1432 aaPredicted RBP eCLIP12.58□□□□□ -0.4
PHF11-201ENST00000357596 BIVM-ERCC5R4GMW8 1640 aa12.57□□□□□ -0.4
PHF11-201ENST00000357596 RAD54L2Q9Y4B4 1467 aa12.57□□□□□ -0.4
PHF11-201ENST00000357596 TOP2BQ02880 1626 aa12.56□□□□□ -0.4
PHF11-201ENST00000357596 SYNJ1O43426 1573 aa12.55□□□□□ -0.4
PHF11-201ENST00000357596 DNAJC5Q9H3Z4 198 aa12.53□□□□□ -0.4
PHF11-201ENST00000357596 ABCA10Q8WWZ4 1543 aa12.51□□□□□ -0.41
PHF11-201ENST00000357596 AQRO60306 1485 aaKnown RBP eCLIP12.51□□□□□ -0.41
PHF11-201ENST00000357596 TDRD9Q8NDG6 1382 aaKnown RBP12.49□□□□□ -0.41
PHF11-201ENST00000357596 ABCA5Q8WWZ7 1642 aa12.48□□□□□ -0.41
PHF11-201ENST00000357596 GRIN2BQ13224 1484 aa12.47□□□□□ -0.41
PHF11-201ENST00000357596 CHRDL2Q6WN34 429 aa12.46□□□□□ -0.42
PHF11-201ENST00000357596 GAPVD1Q14C86 1478 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms