RNA–Protein interactions for RNA: ENST00000354376.3

C9orf163-201, Transcript of chromosome 9 open reading frame 163, humanhuman

Gene C9orf163, Length 2,572 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf163-201ENST00000354376 NISCHQ9Y2I1 1504 aa48.46■■■■■ 5.35
C9orf163-201ENST00000354376 CCDC180Q9P1Z9 1646 aa41.4■■■■■ 4.22
C9orf163-201ENST00000354376 SHROOM4Q9ULL8 1493 aa41.02■■■■■ 4.16
C9orf163-201ENST00000354376 ZCCHC6Q5VYS8 1495 aaKnown RBP40.86■■■■■ 4.13
C9orf163-201ENST00000354376 DCAF8L2P0C7V8 631 aa40.47■■■■■ 4.07
C9orf163-201ENST00000354376 SUPT5HO00267 1087 aaKnown RBP39.9■■■■□ 3.98
C9orf163-201ENST00000354376 DCAF1Q9Y4B6 1507 aa39.68■■■■□ 3.94
C9orf163-201ENST00000354376 ABCC9O60706 1549 aa39.03■■■■□ 3.84
C9orf163-201ENST00000354376 SCRIBQ14160 1630 aa38.84■■■■□ 3.81
C9orf163-201ENST00000354376 MYO15BQ96JP2 1530 aa38.73■■■■□ 3.79
C9orf163-201ENST00000354376 CHIC1Q5VXU3 224 aa38.46■■■■□ 3.75
C9orf163-201ENST00000354376 NACADO15069 1562 aa38.44■■■■□ 3.74
C9orf163-201ENST00000354376 RSF1Q96T23 1441 aaPredicted RBP38.15■■■■□ 3.7
C9orf163-201ENST00000354376 RB1CC1Q8TDY2 1594 aa37.95■■■■□ 3.67
C9orf163-201ENST00000354376 CECR2Q9BXF3 1484 aa37.94■■■■□ 3.66
C9orf163-201ENST00000354376 MROH2BQ7Z745 1585 aa37.71■■■■□ 3.63
C9orf163-201ENST00000354376 WIZO95785 1651 aa37.48■■■■□ 3.59
C9orf163-201ENST00000354376 UNC13AQ9UPW8 1703 aa37.46■■■■□ 3.59
C9orf163-201ENST00000354376 LOC105371045A0A1W2PR82 267 aa37.38■■■■□ 3.58
C9orf163-201ENST00000354376 PABPN1Q86U42 306 aaKnown RBP eCLIP37.26■■■■□ 3.56
C9orf163-201ENST00000354376 BAZ1AQ9NRL2 1556 aaPredicted RBP37.22■■■■□ 3.55
C9orf163-201ENST00000354376 TRIM41Q8WV44 630 aa37.14■■■■□ 3.54
C9orf163-201ENST00000354376 BICRAQ9NZM4 1560 aa37.04■■■■□ 3.52
C9orf163-201ENST00000354376 SMARCA4P51532 1647 aa37.04■■■■□ 3.52
C9orf163-201ENST00000354376 FAM9AQ8IZU1 332 aaPredicted RBP36.92■■■■□ 3.5
C9orf163-201ENST00000354376 TOP2AP11388 1531 aaKnown RBP36.8■■■■□ 3.48
C9orf163-201ENST00000354376 EHMT2Q96KQ7 1210 aa36.7■■■■□ 3.47
C9orf163-201ENST00000354376 CCDC88BA6NC98 1476 aa36.7■■■■□ 3.47
C9orf163-201ENST00000354376 PCGF6Q9BYE7 350 aa36.66■■■■□ 3.46
C9orf163-201ENST00000354376 EIF4G1Q04637 1599 aaKnown RBP36.66■■■■□ 3.46
C9orf163-201ENST00000354376 SMARCA2P51531 1590 aa36.62■■■■□ 3.45
C9orf163-201ENST00000354376 ABCC8Q09428 1581 aa36.44■■■■□ 3.42
C9orf163-201ENST00000354376 PEG3Q9GZU2 1588 aa36.3■■■■□ 3.4
C9orf163-201ENST00000354376 ATAD2BQ9ULI0 1458 aa36.25■■■■□ 3.39
C9orf163-201ENST00000354376 HRCP23327 699 aa36.15■■■■□ 3.38
C9orf163-201ENST00000354376 BAZ1BQ9UIG0 1483 aaKnown RBP36.09■■■■□ 3.37
C9orf163-201ENST00000354376 TRIM26Q12899 539 aaPredicted RBP36.01■■■■□ 3.35
C9orf163-201ENST00000354376 SOGA1O94964 1423 aa35.98■■■■□ 3.35
C9orf163-201ENST00000354376 RUSC2Q8N2Y8 1516 aa35.88■■■■□ 3.33
C9orf163-201ENST00000354376 WRNQ14191 1432 aaPredicted RBP eCLIP35.82■■■■□ 3.33
C9orf163-201ENST00000354376 PPARGC1BQ86YN6 1023 aaKnown RBP35.78■■■■□ 3.32
C9orf163-201ENST00000354376 SYNJ1O43426 1573 aa35.72■■■■□ 3.31
C9orf163-201ENST00000354376 CSRNP3Q8WYN3 585 aa35.65■■■■□ 3.3
C9orf163-201ENST00000354376 NCAPD3P42695 1498 aa35.61■■■■□ 3.29
C9orf163-201ENST00000354376 HMGXB3Q12766 1538 aa35.52■■■■□ 3.28
C9orf163-201ENST00000354376 EEA1Q15075 1411 aa35.49■■■■□ 3.27
C9orf163-201ENST00000354376 UBTFP17480 764 aaKnown RBP35.48■■■■□ 3.27
C9orf163-201ENST00000354376 CEP162Q5TB80 1403 aa35.46■■■■□ 3.27
C9orf163-201ENST00000354376 TNIKQ9UKE5 1360 aa35.4■■■■□ 3.26
C9orf163-201ENST00000354376 TTBK1Q5TCY1 1321 aaPredicted RBP35.32■■■■□ 3.25
C9orf163-201ENST00000354376 GOLGA3Q08378 1498 aa35.3■■■■□ 3.24
C9orf163-201ENST00000354376 TOP2BQ02880 1626 aa35.26■■■■□ 3.24
C9orf163-201ENST00000354376 CFTRP13569 1480 aa35.17■■■■□ 3.22
C9orf163-201ENST00000354376 CEP164Q9UPV0 1460 aa35.16■■■■□ 3.22
C9orf163-201ENST00000354376 BIVM-ERCC5R4GMW8 1640 aa35.14■■■■□ 3.22
C9orf163-201ENST00000354376 CUX1P39880 1505 aa35.13■■■■□ 3.21
C9orf163-201ENST00000354376 RAPGEF2Q9Y4G8 1499 aa35.11■■■■□ 3.21
C9orf163-201ENST00000354376 KIF21BO75037 1637 aa35.1■■■■□ 3.21
C9orf163-201ENST00000354376 CC2D2AQ9P2K1 1620 aa35.1■■■■□ 3.21
C9orf163-201ENST00000354376 RANGAP1P46060 587 aaPredicted RBP35.06■■■■□ 3.2
C9orf163-201ENST00000354376 CLIP1P30622 1438 aa34.92■■■■□ 3.18
C9orf163-201ENST00000354376 CADPSQ9ULU8 1353 aa34.91■■■■□ 3.18
C9orf163-201ENST00000354376 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.83■■■■□ 3.17
C9orf163-201ENST00000354376 ZEB1P37275 1124 aaPredicted RBP34.8■■■■□ 3.16
C9orf163-201ENST00000354376 PRDM2Q13029 1718 aa34.78■■■■□ 3.16
C9orf163-201ENST00000354376 PRXQ9BXM0 1461 aa34.78■■■■□ 3.16
C9orf163-201ENST00000354376 KIF27Q86VH2 1401 aa34.74■■■■□ 3.15
C9orf163-201ENST00000354376 VPS8Q8N3P4 1428 aa34.66■■■■□ 3.14
C9orf163-201ENST00000354376 ERICH3Q5RHP9 1530 aa34.63■■■■□ 3.13
C9orf163-201ENST00000354376 NESP48681 1621 aa34.63■■■■□ 3.13
C9orf163-201ENST00000354376 CCER1Q8TC90 406 aaPredicted RBP34.6■■■■□ 3.13
C9orf163-201ENST00000354376 DNAJC5BQ9UF47 199 aa34.6■■■■□ 3.13
C9orf163-201ENST00000354376 CUX2O14529 1486 aa34.6■■■■□ 3.13
C9orf163-201ENST00000354376 FGD5Q6ZNL6 1462 aa34.58■■■■□ 3.13
C9orf163-201ENST00000354376 FANCD2Q9BXW9 1451 aa34.58■■■■□ 3.13
C9orf163-201ENST00000354376 IGF1RP08069 1367 aa34.49■■■■□ 3.11
C9orf163-201ENST00000354376 ARAP1Q96P48 1450 aa34.47■■■■□ 3.11
C9orf163-201ENST00000354376 APLP2Q06481 763 aa34.45■■■■□ 3.1
C9orf163-201ENST00000354376 HNRNPUL2Q1KMD3 747 aaKnown RBP34.38■■■■□ 3.09
C9orf163-201ENST00000354376 RAD54L2Q9Y4B4 1467 aa34.37■■■■□ 3.09
C9orf163-201ENST00000354376 CARMIL1Q5VZK9 1371 aa34.31■■■■□ 3.08
C9orf163-201ENST00000354376 TOPBP1Q92547 1522 aa34.3■■■■□ 3.08
C9orf163-201ENST00000354376 DNMBPQ6XZF7 1577 aa34.28■■■■□ 3.08
C9orf163-201ENST00000354376 ARHGAP35Q9NRY4 1499 aa34.27■■■■□ 3.08
C9orf163-201ENST00000354376 KANK4Q5T7N3 995 aaPredicted RBP34.27■■■■□ 3.08
C9orf163-201ENST00000354376 POLA1P09884 1462 aaPredicted RBP34.26■■■■□ 3.07
C9orf163-201ENST00000354376 URB2Q14146 1524 aaKnown RBP34.16■■■■□ 3.06
C9orf163-201ENST00000354376 LAMC3Q9Y6N6 1575 aa34.15■■■■□ 3.06
C9orf163-201ENST00000354376 ABCA10Q8WWZ4 1543 aa34.12■■■■□ 3.05
C9orf163-201ENST00000354376 P3H3Q8IVL6 736 aa34.05■■■■□ 3.04
C9orf163-201ENST00000354376 TDRD9Q8NDG6 1382 aaKnown RBP33.99■■■■□ 3.03
C9orf163-201ENST00000354376 PDS5BQ9NTI5 1447 aa33.97■■■■□ 3.03
C9orf163-201ENST00000354376 KIF21AQ7Z4S6 1674 aa33.96■■■■□ 3.03
C9orf163-201ENST00000354376 PELP1Q8IZL8 1130 aaKnown RBP33.88■■■■□ 3.01
C9orf163-201ENST00000354376 WDR97A6NE52 1622 aa33.86■■■■□ 3.01
C9orf163-201ENST00000354376 FHOD3Q2V2M9 1422 aa33.8■■■■□ 3
C9orf163-201ENST00000354376 ATP1B4Q9UN42 357 aaPredicted RBP33.8■■■■□ 3
C9orf163-201ENST00000354376 CUL7Q14999 1698 aa33.77■■■■□ 3
C9orf163-201ENST00000354376 GAPVD1Q14C86 1478 aa33.76■■■■□ 3
C9orf163-201ENST00000354376 RRBP1Q9P2E9 1410 aaKnown RBP33.75■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms