RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 NISCHQ9Y2I1 1504 aa23.31■■□□□ 1.32
TRAF3IP2-201ENST00000340026 CCDC180Q9P1Z9 1646 aa20.2■□□□□ 0.82
TRAF3IP2-201ENST00000340026 ZCCHC6Q5VYS8 1495 aaKnown RBP19.72■□□□□ 0.75
TRAF3IP2-201ENST00000340026 DCAF1Q9Y4B6 1507 aa19.43■□□□□ 0.7
TRAF3IP2-201ENST00000340026 MYO15BQ96JP2 1530 aa19.04■□□□□ 0.64
TRAF3IP2-201ENST00000340026 SHROOM4Q9ULL8 1493 aa19.04■□□□□ 0.64
TRAF3IP2-201ENST00000340026 DCAF8L2P0C7V8 631 aa18.67■□□□□ 0.58
TRAF3IP2-201ENST00000340026 NACADO15069 1562 aa18.64■□□□□ 0.57
TRAF3IP2-201ENST00000340026 SUPT5HO00267 1087 aaKnown RBP18.57■□□□□ 0.56
TRAF3IP2-201ENST00000340026 ABCC9O60706 1549 aa18.56■□□□□ 0.56
TRAF3IP2-201ENST00000340026 SCRIBQ14160 1630 aa18.42■□□□□ 0.54
TRAF3IP2-201ENST00000340026 RB1CC1Q8TDY2 1594 aa18.31■□□□□ 0.52
TRAF3IP2-201ENST00000340026 RSF1Q96T23 1441 aaPredicted RBP18.23■□□□□ 0.51
TRAF3IP2-201ENST00000340026 CHIC1Q5VXU3 224 aa18.21■□□□□ 0.51
TRAF3IP2-201ENST00000340026 UNC13AQ9UPW8 1703 aa17.98■□□□□ 0.47
TRAF3IP2-201ENST00000340026 BAZ1AQ9NRL2 1556 aaPredicted RBP17.97■□□□□ 0.47
TRAF3IP2-201ENST00000340026 MROH2BQ7Z745 1585 aa17.96■□□□□ 0.47
TRAF3IP2-201ENST00000340026 CECR2Q9BXF3 1484 aa17.96■□□□□ 0.47
TRAF3IP2-201ENST00000340026 WIZO95785 1651 aa17.84■□□□□ 0.45
TRAF3IP2-201ENST00000340026 SMARCA4P51532 1647 aa17.81■□□□□ 0.44
TRAF3IP2-201ENST00000340026 BICRAQ9NZM4 1560 aa17.76■□□□□ 0.43
TRAF3IP2-201ENST00000340026 TOP2AP11388 1531 aaKnown RBP17.75■□□□□ 0.43
TRAF3IP2-201ENST00000340026 EIF4G1Q04637 1599 aaKnown RBP17.74■□□□□ 0.43
TRAF3IP2-201ENST00000340026 PEG3Q9GZU2 1588 aa17.69■□□□□ 0.42
TRAF3IP2-201ENST00000340026 SMARCA2P51531 1590 aa17.58■□□□□ 0.4
TRAF3IP2-201ENST00000340026 TRIM41Q8WV44 630 aa17.52■□□□□ 0.4
TRAF3IP2-201ENST00000340026 CCDC88BA6NC98 1476 aa17.5■□□□□ 0.39
TRAF3IP2-201ENST00000340026 LOC105371045A0A1W2PR82 267 aa17.4■□□□□ 0.38
TRAF3IP2-201ENST00000340026 ATAD2BQ9ULI0 1458 aa17.36■□□□□ 0.37
TRAF3IP2-201ENST00000340026 PABPN1Q86U42 306 aaKnown RBP eCLIP17.31■□□□□ 0.36
TRAF3IP2-201ENST00000340026 EEA1Q15075 1411 aa17.26■□□□□ 0.35
TRAF3IP2-201ENST00000340026 BAZ1BQ9UIG0 1483 aaKnown RBP17.25■□□□□ 0.35
TRAF3IP2-201ENST00000340026 HMGXB3Q12766 1538 aa17.24■□□□□ 0.35
TRAF3IP2-201ENST00000340026 ABCC8Q09428 1581 aa17.23■□□□□ 0.35
TRAF3IP2-201ENST00000340026 HRCP23327 699 aa17.2■□□□□ 0.34
TRAF3IP2-201ENST00000340026 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
TRAF3IP2-201ENST00000340026 TRIM26Q12899 539 aaPredicted RBP17.16■□□□□ 0.34
TRAF3IP2-201ENST00000340026 PCGF6Q9BYE7 350 aa17.14■□□□□ 0.33
TRAF3IP2-201ENST00000340026 WRNQ14191 1432 aaPredicted RBP eCLIP17.12■□□□□ 0.33
TRAF3IP2-201ENST00000340026 FAM9AQ8IZU1 332 aaPredicted RBP17.06■□□□□ 0.32
TRAF3IP2-201ENST00000340026 SYNJ1O43426 1573 aa17.05■□□□□ 0.32
TRAF3IP2-201ENST00000340026 BIVM-ERCC5R4GMW8 1640 aa17.02■□□□□ 0.32
TRAF3IP2-201ENST00000340026 TNIKQ9UKE5 1360 aa17.02■□□□□ 0.32
TRAF3IP2-201ENST00000340026 TOP2BQ02880 1626 aa17.02■□□□□ 0.31
TRAF3IP2-201ENST00000340026 SOGA1O94964 1423 aa17.01■□□□□ 0.31
TRAF3IP2-201ENST00000340026 KIF21BO75037 1637 aa17■□□□□ 0.31
TRAF3IP2-201ENST00000340026 PRDM2Q13029 1718 aa16.96■□□□□ 0.31
TRAF3IP2-201ENST00000340026 GOLGA3Q08378 1498 aa16.96■□□□□ 0.31
TRAF3IP2-201ENST00000340026 CSRNP3Q8WYN3 585 aa16.95■□□□□ 0.3
TRAF3IP2-201ENST00000340026 CFTRP13569 1480 aa16.93■□□□□ 0.3
TRAF3IP2-201ENST00000340026 CEP164Q9UPV0 1460 aa16.92■□□□□ 0.3
TRAF3IP2-201ENST00000340026 RUSC2Q8N2Y8 1516 aa16.91■□□□□ 0.3
TRAF3IP2-201ENST00000340026 CEP162Q5TB80 1403 aa16.9■□□□□ 0.3
TRAF3IP2-201ENST00000340026 ERICH3Q5RHP9 1530 aa16.81■□□□□ 0.28
TRAF3IP2-201ENST00000340026 ZEB1P37275 1124 aaPredicted RBP16.81■□□□□ 0.28
TRAF3IP2-201ENST00000340026 CUX1P39880 1505 aa16.78■□□□□ 0.28
TRAF3IP2-201ENST00000340026 PRXQ9BXM0 1461 aa16.74■□□□□ 0.27
TRAF3IP2-201ENST00000340026 CC2D2AQ9P2K1 1620 aa16.73■□□□□ 0.27
TRAF3IP2-201ENST00000340026 CADPSQ9ULU8 1353 aa16.71■□□□□ 0.26
TRAF3IP2-201ENST00000340026 RAPGEF2Q9Y4G8 1499 aa16.68■□□□□ 0.26
TRAF3IP2-201ENST00000340026 EHMT2Q96KQ7 1210 aa16.66■□□□□ 0.26
TRAF3IP2-201ENST00000340026 KIF27Q86VH2 1401 aa16.65■□□□□ 0.26
TRAF3IP2-201ENST00000340026 UBTFP17480 764 aaKnown RBP16.65■□□□□ 0.26
TRAF3IP2-201ENST00000340026 CLIP1P30622 1438 aa16.65■□□□□ 0.26
TRAF3IP2-201ENST00000340026 VPS8Q8N3P4 1428 aa16.64■□□□□ 0.25
TRAF3IP2-201ENST00000340026 PPARGC1BQ86YN6 1023 aaKnown RBP16.53■□□□□ 0.24
TRAF3IP2-201ENST00000340026 DNMBPQ6XZF7 1577 aa16.52■□□□□ 0.23
TRAF3IP2-201ENST00000340026 LAMC3Q9Y6N6 1575 aa16.52■□□□□ 0.23
TRAF3IP2-201ENST00000340026 FANCD2Q9BXW9 1451 aa16.5■□□□□ 0.23
TRAF3IP2-201ENST00000340026 FGD5Q6ZNL6 1462 aa16.49■□□□□ 0.23
TRAF3IP2-201ENST00000340026 ARAP1Q96P48 1450 aa16.47■□□□□ 0.23
TRAF3IP2-201ENST00000340026 IGF1RP08069 1367 aa16.45■□□□□ 0.22
TRAF3IP2-201ENST00000340026 ABCA10Q8WWZ4 1543 aa16.44■□□□□ 0.22
TRAF3IP2-201ENST00000340026 CUX2O14529 1486 aa16.44■□□□□ 0.22
TRAF3IP2-201ENST00000340026 TOPBP1Q92547 1522 aa16.41■□□□□ 0.22
TRAF3IP2-201ENST00000340026 MAP3K1Q13233 1512 aa16.4■□□□□ 0.22
TRAF3IP2-201ENST00000340026 WDR97A6NE52 1622 aa16.39■□□□□ 0.21
TRAF3IP2-201ENST00000340026 CUL7Q14999 1698 aa16.38■□□□□ 0.21
TRAF3IP2-201ENST00000340026 ARHGAP35Q9NRY4 1499 aa16.37■□□□□ 0.21
TRAF3IP2-201ENST00000340026 POLA1P09884 1462 aaPredicted RBP16.36■□□□□ 0.21
TRAF3IP2-201ENST00000340026 CARMIL1Q5VZK9 1371 aa16.34■□□□□ 0.21
TRAF3IP2-201ENST00000340026 APLP2Q06481 763 aa16.3■□□□□ 0.2
TRAF3IP2-201ENST00000340026 PDS5BQ9NTI5 1447 aa16.3■□□□□ 0.2
TRAF3IP2-201ENST00000340026 NESP48681 1621 aa16.29■□□□□ 0.2
TRAF3IP2-201ENST00000340026 ABCA5Q8WWZ7 1642 aa16.28■□□□□ 0.2
TRAF3IP2-201ENST00000340026 URB2Q14146 1524 aaKnown RBP16.28■□□□□ 0.2
TRAF3IP2-201ENST00000340026 EFCAB5A4FU69 1503 aa16.28■□□□□ 0.2
TRAF3IP2-201ENST00000340026 CCER1Q8TC90 406 aaPredicted RBP16.27■□□□□ 0.2
TRAF3IP2-201ENST00000340026 RRBP1Q9P2E9 1410 aaKnown RBP16.27■□□□□ 0.2
TRAF3IP2-201ENST00000340026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.25■□□□□ 0.19
TRAF3IP2-201ENST00000340026 CTTNBP2Q8WZ74 1663 aa16.25■□□□□ 0.19
TRAF3IP2-201ENST00000340026 RAD54L2Q9Y4B4 1467 aa16.22■□□□□ 0.19
TRAF3IP2-201ENST00000340026 FHAD1B1AJZ9 1412 aa16.22■□□□□ 0.19
TRAF3IP2-201ENST00000340026 TIAM1Q13009 1591 aa16.22■□□□□ 0.19
TRAF3IP2-201ENST00000340026 AQRO60306 1485 aaKnown RBP eCLIP16.21■□□□□ 0.19
TRAF3IP2-201ENST00000340026 CFAP43Q8NDM7 1665 aa16.21■□□□□ 0.19
TRAF3IP2-201ENST00000340026 KIF21AQ7Z4S6 1674 aa16.2■□□□□ 0.18
TRAF3IP2-201ENST00000340026 CLSPNQ9HAW4 1339 aa16.18■□□□□ 0.18
TRAF3IP2-201ENST00000340026 TARBP1Q13395 1621 aaKnown RBP16.18■□□□□ 0.18
TRAF3IP2-201ENST00000340026 FYCO1Q9BQS8 1478 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms