RNA–Protein interactions for RNA: ENST00000335542.12

GHRL-202, Transcript of ghrelin and obestatin prepropeptide, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GHRL, Length 1,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHRL-202ENST00000335542 NISCHQ9Y2I1 1504 aa27.99■■■□□ 2.07
GHRL-202ENST00000335542 CCDC180Q9P1Z9 1646 aa24.59■■□□□ 1.53
GHRL-202ENST00000335542 ABCC9O60706 1549 aa23.74■■□□□ 1.39
GHRL-202ENST00000335542 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
GHRL-202ENST00000335542 ZCCHC6Q5VYS8 1495 aaKnown RBP23.4■■□□□ 1.34
GHRL-202ENST00000335542 DCAF1Q9Y4B6 1507 aa23.12■■□□□ 1.29
GHRL-202ENST00000335542 NACADO15069 1562 aa23.07■■□□□ 1.28
GHRL-202ENST00000335542 MYO15BQ96JP2 1530 aa23.01■■□□□ 1.27
GHRL-202ENST00000335542 RB1CC1Q8TDY2 1594 aa23■■□□□ 1.27
GHRL-202ENST00000335542 SHROOM4Q9ULL8 1493 aa22.64■■□□□ 1.21
GHRL-202ENST00000335542 SCRIBQ14160 1630 aa22.61■■□□□ 1.21
GHRL-202ENST00000335542 PABPN1Q86U42 306 aaKnown RBP eCLIP22.33■■□□□ 1.17
GHRL-202ENST00000335542 UNC13AQ9UPW8 1703 aa22.33■■□□□ 1.16
GHRL-202ENST00000335542 BICRAQ9NZM4 1560 aa22.17■■□□□ 1.14
GHRL-202ENST00000335542 CECR2Q9BXF3 1484 aa21.76■■□□□ 1.07
GHRL-202ENST00000335542 BAZ1AQ9NRL2 1556 aaPredicted RBP21.69■■□□□ 1.06
GHRL-202ENST00000335542 EIF4G1Q04637 1599 aaKnown RBP21.62■■□□□ 1.05
GHRL-202ENST00000335542 SMARCA4P51532 1647 aa21.6■■□□□ 1.05
GHRL-202ENST00000335542 SUPT5HO00267 1087 aaKnown RBP21.6■■□□□ 1.05
GHRL-202ENST00000335542 MROH2BQ7Z745 1585 aa21.58■■□□□ 1.05
GHRL-202ENST00000335542 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
GHRL-202ENST00000335542 CC2D2AQ9P2K1 1620 aa21.42■■□□□ 1.02
GHRL-202ENST00000335542 SMARCA2P51531 1590 aa21.41■■□□□ 1.02
GHRL-202ENST00000335542 ATAD2BQ9ULI0 1458 aa21.39■■□□□ 1.01
GHRL-202ENST00000335542 WIZO95785 1651 aa21.37■■□□□ 1.01
GHRL-202ENST00000335542 AEBP2Q6ZN18 517 aaPredicted RBP21.36■■□□□ 1.01
GHRL-202ENST00000335542 PEG3Q9GZU2 1588 aa21.31■■□□□ 1
GHRL-202ENST00000335542 BAZ1BQ9UIG0 1483 aaKnown RBP21.3■■□□□ 1
GHRL-202ENST00000335542 NCAPD3P42695 1498 aa21.27■■□□□ 1
GHRL-202ENST00000335542 DNAJC5BQ9UF47 199 aa21.25■□□□□ 0.99
GHRL-202ENST00000335542 TOP2AP11388 1531 aaKnown RBP21.2■□□□□ 0.98
GHRL-202ENST00000335542 HMGXB3Q12766 1538 aa21.2■□□□□ 0.98
GHRL-202ENST00000335542 CCDC88BA6NC98 1476 aa20.96■□□□□ 0.95
GHRL-202ENST00000335542 CADPSQ9ULU8 1353 aa20.74■□□□□ 0.91
GHRL-202ENST00000335542 CFTRP13569 1480 aa20.67■□□□□ 0.9
GHRL-202ENST00000335542 POTEDQ86YR6 584 aa20.65■□□□□ 0.9
GHRL-202ENST00000335542 NESP48681 1621 aa20.65■□□□□ 0.9
GHRL-202ENST00000335542 LAMC3Q9Y6N6 1575 aa20.63■□□□□ 0.89
GHRL-202ENST00000335542 PDS5BQ9NTI5 1447 aa20.57■□□□□ 0.88
GHRL-202ENST00000335542 FANCD2Q9BXW9 1451 aa20.52■□□□□ 0.88
GHRL-202ENST00000335542 ERCC6Q03468 1493 aa20.5■□□□□ 0.87
GHRL-202ENST00000335542 PRDM2Q13029 1718 aa20.47■□□□□ 0.87
GHRL-202ENST00000335542 CEP164Q9UPV0 1460 aa20.46■□□□□ 0.87
GHRL-202ENST00000335542 ABCC8Q09428 1581 aa20.36■□□□□ 0.85
GHRL-202ENST00000335542 WRNQ14191 1432 aaPredicted RBP eCLIP20.36■□□□□ 0.85
GHRL-202ENST00000335542 TRIM41Q8WV44 630 aa20.36■□□□□ 0.85
GHRL-202ENST00000335542 KIF21AQ7Z4S6 1674 aa20.35■□□□□ 0.85
GHRL-202ENST00000335542 CHIC1Q5VXU3 224 aa20.35■□□□□ 0.85
GHRL-202ENST00000335542 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
GHRL-202ENST00000335542 CUX1P39880 1505 aa20.24■□□□□ 0.83
GHRL-202ENST00000335542 DNMBPQ6XZF7 1577 aa20.22■□□□□ 0.83
GHRL-202ENST00000335542 URB2Q14146 1524 aaKnown RBP20.22■□□□□ 0.83
GHRL-202ENST00000335542 TOPBP1Q92547 1522 aa20.21■□□□□ 0.83
GHRL-202ENST00000335542 SYNJ1O43426 1573 aa20.2■□□□□ 0.82
GHRL-202ENST00000335542 TOP2BQ02880 1626 aa20.17■□□□□ 0.82
GHRL-202ENST00000335542 WDR62O43379 1518 aa20.15■□□□□ 0.82
GHRL-202ENST00000335542 THOC2Q8NI27 1593 aaKnown RBP20.14■□□□□ 0.81
GHRL-202ENST00000335542 BIVM-ERCC5R4GMW8 1640 aa20.13■□□□□ 0.81
GHRL-202ENST00000335542 FGD5Q6ZNL6 1462 aa20.12■□□□□ 0.81
GHRL-202ENST00000335542 POLA1P09884 1462 aaPredicted RBP20.07■□□□□ 0.8
GHRL-202ENST00000335542 SOGA1O94964 1423 aa20.06■□□□□ 0.8
GHRL-202ENST00000335542 RAD54L2Q9Y4B4 1467 aa20.02■□□□□ 0.79
GHRL-202ENST00000335542 IFT140Q96RY7 1462 aa19.99■□□□□ 0.79
GHRL-202ENST00000335542 FAM9AQ8IZU1 332 aaPredicted RBP19.97■□□□□ 0.79
GHRL-202ENST00000335542 CUX2O14529 1486 aa19.97■□□□□ 0.79
GHRL-202ENST00000335542 KIF27Q86VH2 1401 aa19.93■□□□□ 0.78
GHRL-202ENST00000335542 ABCA10Q8WWZ4 1543 aa19.91■□□□□ 0.78
GHRL-202ENST00000335542 TDRD9Q8NDG6 1382 aaKnown RBP19.9■□□□□ 0.78
GHRL-202ENST00000335542 TARBP1Q13395 1621 aaKnown RBP19.87■□□□□ 0.77
GHRL-202ENST00000335542 EEA1Q15075 1411 aa19.86■□□□□ 0.77
GHRL-202ENST00000335542 ZNF608Q9ULD9 1512 aaPredicted RBP19.82■□□□□ 0.76
GHRL-202ENST00000335542 AQRO60306 1485 aaKnown RBP eCLIP19.82■□□□□ 0.76
GHRL-202ENST00000335542 GAPVD1Q14C86 1478 aa19.82■□□□□ 0.76
GHRL-202ENST00000335542 RUSC2Q8N2Y8 1516 aa19.82■□□□□ 0.76
GHRL-202ENST00000335542 CSRNP3Q8WYN3 585 aa19.8■□□□□ 0.76
GHRL-202ENST00000335542 WDR97A6NE52 1622 aa19.8■□□□□ 0.76
GHRL-202ENST00000335542 GRIN2BQ13224 1484 aa19.75■□□□□ 0.75
GHRL-202ENST00000335542 EIF4G3O43432 1585 aaKnown RBP19.74■□□□□ 0.75
GHRL-202ENST00000335542 ABCA5Q8WWZ7 1642 aa19.74■□□□□ 0.75
GHRL-202ENST00000335542 EHMT2Q96KQ7 1210 aa19.73■□□□□ 0.75
GHRL-202ENST00000335542 IGF1RP08069 1367 aa19.72■□□□□ 0.75
GHRL-202ENST00000335542 ERICH3Q5RHP9 1530 aa19.69■□□□□ 0.74
GHRL-202ENST00000335542 CARMIL1Q5VZK9 1371 aa19.67■□□□□ 0.74
GHRL-202ENST00000335542 PBRM1Q86U86 1689 aa19.66■□□□□ 0.74
GHRL-202ENST00000335542 SNAPC4Q5SXM2 1469 aa19.65■□□□□ 0.74
GHRL-202ENST00000335542 FBLN2P98095 1184 aa19.65■□□□□ 0.74
GHRL-202ENST00000335542 CHMP7Q8WUX9 453 aaPredicted RBP19.62■□□□□ 0.73
GHRL-202ENST00000335542 MAGI1Q96QZ7 1491 aaPredicted RBP19.61■□□□□ 0.73
GHRL-202ENST00000335542 CUL7Q14999 1698 aa19.61■□□□□ 0.73
GHRL-202ENST00000335542 FHAD1B1AJZ9 1412 aa19.61■□□□□ 0.73
GHRL-202ENST00000335542 UBTFP17480 764 aaKnown RBP19.6■□□□□ 0.73
GHRL-202ENST00000335542 RAPGEF2Q9Y4G8 1499 aa19.58■□□□□ 0.73
GHRL-202ENST00000335542 PRXQ9BXM0 1461 aa19.58■□□□□ 0.72
GHRL-202ENST00000335542 GOLGA3Q08378 1498 aa19.56■□□□□ 0.72
GHRL-202ENST00000335542 LOC105371045A0A1W2PR82 267 aa19.56■□□□□ 0.72
GHRL-202ENST00000335542 ADAMTS12P58397 1594 aa19.56■□□□□ 0.72
GHRL-202ENST00000335542 KIF21BO75037 1637 aa19.54■□□□□ 0.72
GHRL-202ENST00000335542 SYNJ2O15056 1496 aa19.54■□□□□ 0.72
GHRL-202ENST00000335542 GRIN2AQ12879 1464 aa19.47■□□□□ 0.71
GHRL-202ENST00000335542 RANGAP1P46060 587 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms