RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 NISCHQ9Y2I1 1504 aa22.97■■□□□ 1.27
CCDC172-201ENST00000333254 CCDC180Q9P1Z9 1646 aa19.88■□□□□ 0.77
CCDC172-201ENST00000333254 AEBP2Q6ZN18 517 aaPredicted RBP19.66■□□□□ 0.74
CCDC172-201ENST00000333254 ZCCHC6Q5VYS8 1495 aaKnown RBP19.46■□□□□ 0.71
CCDC172-201ENST00000333254 DCAF1Q9Y4B6 1507 aa19.11■□□□□ 0.65
CCDC172-201ENST00000333254 SHROOM4Q9ULL8 1493 aa18.96■□□□□ 0.63
CCDC172-201ENST00000333254 MYO15BQ96JP2 1530 aa18.66■□□□□ 0.58
CCDC172-201ENST00000333254 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
CCDC172-201ENST00000333254 SUPT5HO00267 1087 aaKnown RBP18.54■□□□□ 0.56
CCDC172-201ENST00000333254 DCAF8L2P0C7V8 631 aa18.46■□□□□ 0.55
CCDC172-201ENST00000333254 ABCC9O60706 1549 aa18.37■□□□□ 0.53
CCDC172-201ENST00000333254 NACADO15069 1562 aa18.29■□□□□ 0.52
CCDC172-201ENST00000333254 SCRIBQ14160 1630 aa18.2■□□□□ 0.5
CCDC172-201ENST00000333254 RSF1Q96T23 1441 aaPredicted RBP18.02■□□□□ 0.48
CCDC172-201ENST00000333254 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.47
CCDC172-201ENST00000333254 MROH2BQ7Z745 1585 aa17.74■□□□□ 0.43
CCDC172-201ENST00000333254 CECR2Q9BXF3 1484 aa17.73■□□□□ 0.43
CCDC172-201ENST00000333254 BAZ1AQ9NRL2 1556 aaPredicted RBP17.72■□□□□ 0.43
CCDC172-201ENST00000333254 UNC13AQ9UPW8 1703 aa17.71■□□□□ 0.43
CCDC172-201ENST00000333254 WIZO95785 1651 aa17.65■□□□□ 0.42
CCDC172-201ENST00000333254 EIF4G1Q04637 1599 aaKnown RBP17.57■□□□□ 0.4
CCDC172-201ENST00000333254 SMARCA4P51532 1647 aa17.57■□□□□ 0.4
CCDC172-201ENST00000333254 TOP2AP11388 1531 aaKnown RBP17.53■□□□□ 0.4
CCDC172-201ENST00000333254 TRIM41Q8WV44 630 aa17.45■□□□□ 0.38
CCDC172-201ENST00000333254 BICRAQ9NZM4 1560 aa17.41■□□□□ 0.38
CCDC172-201ENST00000333254 LOC105371045A0A1W2PR82 267 aa17.41■□□□□ 0.38
CCDC172-201ENST00000333254 HRCP23327 699 aa17.41■□□□□ 0.38
CCDC172-201ENST00000333254 PEG3Q9GZU2 1588 aa17.39■□□□□ 0.37
CCDC172-201ENST00000333254 SMARCA2P51531 1590 aa17.38■□□□□ 0.37
CCDC172-201ENST00000333254 PCGF6Q9BYE7 350 aa17.29■□□□□ 0.36
CCDC172-201ENST00000333254 CCDC88BA6NC98 1476 aa17.28■□□□□ 0.36
CCDC172-201ENST00000333254 TRIM26Q12899 539 aaPredicted RBP17.23■□□□□ 0.35
CCDC172-201ENST00000333254 EEA1Q15075 1411 aa17.12■□□□□ 0.33
CCDC172-201ENST00000333254 ABCC8Q09428 1581 aa17.11■□□□□ 0.33
CCDC172-201ENST00000333254 ATAD2BQ9ULI0 1458 aa17.05■□□□□ 0.32
CCDC172-201ENST00000333254 FAM9AQ8IZU1 332 aaPredicted RBP17.04■□□□□ 0.32
CCDC172-201ENST00000333254 BAZ1BQ9UIG0 1483 aaKnown RBP16.99■□□□□ 0.31
CCDC172-201ENST00000333254 PABPN1Q86U42 306 aaKnown RBP eCLIP16.98■□□□□ 0.31
CCDC172-201ENST00000333254 WRNQ14191 1432 aaPredicted RBP eCLIP16.97■□□□□ 0.31
CCDC172-201ENST00000333254 ZEB1P37275 1124 aaPredicted RBP16.94■□□□□ 0.3
CCDC172-201ENST00000333254 HMGXB3Q12766 1538 aa16.93■□□□□ 0.3
CCDC172-201ENST00000333254 SENP3Q9H4L4 574 aaPredicted RBP16.91■□□□□ 0.3
CCDC172-201ENST00000333254 TNIKQ9UKE5 1360 aa16.91■□□□□ 0.3
CCDC172-201ENST00000333254 KIF21BO75037 1637 aa16.89■□□□□ 0.29
CCDC172-201ENST00000333254 SYNJ1O43426 1573 aa16.88■□□□□ 0.29
CCDC172-201ENST00000333254 SOGA1O94964 1423 aa16.88■□□□□ 0.29
CCDC172-201ENST00000333254 GOLGA3Q08378 1498 aa16.85■□□□□ 0.29
CCDC172-201ENST00000333254 BIVM-ERCC5R4GMW8 1640 aa16.84■□□□□ 0.29
CCDC172-201ENST00000333254 NCAPD3P42695 1498 aa16.83■□□□□ 0.28
CCDC172-201ENST00000333254 CEP162Q5TB80 1403 aa16.83■□□□□ 0.28
CCDC172-201ENST00000333254 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
CCDC172-201ENST00000333254 TOP2BQ02880 1626 aa16.81■□□□□ 0.28
CCDC172-201ENST00000333254 CEP164Q9UPV0 1460 aa16.79■□□□□ 0.28
CCDC172-201ENST00000333254 RUSC2Q8N2Y8 1516 aa16.78■□□□□ 0.28
CCDC172-201ENST00000333254 PPARGC1BQ86YN6 1023 aaKnown RBP16.77■□□□□ 0.28
CCDC172-201ENST00000333254 PRDM2Q13029 1718 aa16.76■□□□□ 0.27
CCDC172-201ENST00000333254 EHMT2Q96KQ7 1210 aa16.68■□□□□ 0.26
CCDC172-201ENST00000333254 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
CCDC172-201ENST00000333254 CFTRP13569 1480 aa16.63■□□□□ 0.25
CCDC172-201ENST00000333254 PHF23Q9BUL5 403 aaPredicted RBP16.62■□□□□ 0.25
CCDC172-201ENST00000333254 UBTFP17480 764 aaKnown RBP16.57■□□□□ 0.24
CCDC172-201ENST00000333254 CUX1P39880 1505 aa16.56■□□□□ 0.24
CCDC172-201ENST00000333254 CLIP1P30622 1438 aa16.56■□□□□ 0.24
CCDC172-201ENST00000333254 VPS8Q8N3P4 1428 aa16.54■□□□□ 0.24
CCDC172-201ENST00000333254 PRXQ9BXM0 1461 aa16.54■□□□□ 0.24
CCDC172-201ENST00000333254 RAPGEF2Q9Y4G8 1499 aa16.54■□□□□ 0.24
CCDC172-201ENST00000333254 KIF27Q86VH2 1401 aa16.46■□□□□ 0.23
CCDC172-201ENST00000333254 CADPSQ9ULU8 1353 aa16.39■□□□□ 0.21
CCDC172-201ENST00000333254 CC2D2AQ9P2K1 1620 aa16.39■□□□□ 0.21
CCDC172-201ENST00000333254 CCER1Q8TC90 406 aaPredicted RBP16.37■□□□□ 0.21
CCDC172-201ENST00000333254 ARAP1Q96P48 1450 aa16.35■□□□□ 0.21
CCDC172-201ENST00000333254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
CCDC172-201ENST00000333254 DNMBPQ6XZF7 1577 aa16.27■□□□□ 0.19
CCDC172-201ENST00000333254 APLP2Q06481 763 aa16.27■□□□□ 0.19
CCDC172-201ENST00000333254 FGD5Q6ZNL6 1462 aa16.27■□□□□ 0.19
CCDC172-201ENST00000333254 MAP3K1Q13233 1512 aa16.25■□□□□ 0.19
CCDC172-201ENST00000333254 CUX2O14529 1486 aa16.24■□□□□ 0.19
CCDC172-201ENST00000333254 ARHGAP35Q9NRY4 1499 aa16.23■□□□□ 0.19
CCDC172-201ENST00000333254 FANCD2Q9BXW9 1451 aa16.22■□□□□ 0.19
CCDC172-201ENST00000333254 IGF1RP08069 1367 aa16.21■□□□□ 0.19
CCDC172-201ENST00000333254 LAMC3Q9Y6N6 1575 aa16.2■□□□□ 0.18
CCDC172-201ENST00000333254 ABCA10Q8WWZ4 1543 aa16.18■□□□□ 0.18
CCDC172-201ENST00000333254 CUL7Q14999 1698 aa16.18■□□□□ 0.18
CCDC172-201ENST00000333254 RRBP1Q9P2E9 1410 aaKnown RBP16.18■□□□□ 0.18
CCDC172-201ENST00000333254 WDR97A6NE52 1622 aa16.17■□□□□ 0.18
CCDC172-201ENST00000333254 TTBK1Q5TCY1 1321 aaPredicted RBP16.17■□□□□ 0.18
CCDC172-201ENST00000333254 CLSPNQ9HAW4 1339 aa16.15■□□□□ 0.18
CCDC172-201ENST00000333254 TOPBP1Q92547 1522 aa16.15■□□□□ 0.18
CCDC172-201ENST00000333254 CARMIL1Q5VZK9 1371 aa16.14■□□□□ 0.17
CCDC172-201ENST00000333254 CFAP43Q8NDM7 1665 aa16.13■□□□□ 0.17
CCDC172-201ENST00000333254 TIAM1Q13009 1591 aa16.12■□□□□ 0.17
CCDC172-201ENST00000333254 CTTNBP2Q8WZ74 1663 aa16.11■□□□□ 0.17
CCDC172-201ENST00000333254 EFCAB5A4FU69 1503 aa16.11■□□□□ 0.17
CCDC172-201ENST00000333254 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
CCDC172-201ENST00000333254 FHAD1B1AJZ9 1412 aa16.07■□□□□ 0.16
CCDC172-201ENST00000333254 ABCA5Q8WWZ7 1642 aa16.05■□□□□ 0.16
CCDC172-201ENST00000333254 HNRNPUL2Q1KMD3 747 aaKnown RBP16.05■□□□□ 0.16
CCDC172-201ENST00000333254 AQRO60306 1485 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCDC172-201ENST00000333254 ZNF316A6NFI3 1004 aaPredicted RBP16.02■□□□□ 0.15
CCDC172-201ENST00000333254 KANK4Q5T7N3 995 aaPredicted RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms