RNA–Protein interactions for RNA: ENST00000324866.11

LRTOMT-203, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-203ENST00000324866 NISCHQ9Y2I1 1504 aa19.7■□□□□ 0.74
LRTOMT-203ENST00000324866 CCDC180Q9P1Z9 1646 aa17.05■□□□□ 0.32
LRTOMT-203ENST00000324866 ZCCHC6Q5VYS8 1495 aaKnown RBP16.64■□□□□ 0.25
LRTOMT-203ENST00000324866 DCAF1Q9Y4B6 1507 aa16.37■□□□□ 0.21
LRTOMT-203ENST00000324866 SHROOM4Q9ULL8 1493 aa16.17■□□□□ 0.18
LRTOMT-203ENST00000324866 MYO15BQ96JP2 1530 aa16.04■□□□□ 0.16
LRTOMT-203ENST00000324866 DCAF8L2P0C7V8 631 aa15.93■□□□□ 0.14
LRTOMT-203ENST00000324866 ABCC9O60706 1549 aa15.86■□□□□ 0.13
LRTOMT-203ENST00000324866 NACADO15069 1562 aa15.76■□□□□ 0.11
LRTOMT-203ENST00000324866 SUPT5HO00267 1087 aaKnown RBP15.75■□□□□ 0.11
LRTOMT-203ENST00000324866 SCRIBQ14160 1630 aa15.62■□□□□ 0.09
LRTOMT-203ENST00000324866 RB1CC1Q8TDY2 1594 aa15.51■□□□□ 0.07
LRTOMT-203ENST00000324866 RSF1Q96T23 1441 aaPredicted RBP15.41■□□□□ 0.06
LRTOMT-203ENST00000324866 CHIC1Q5VXU3 224 aa15.38■□□□□ 0.05
LRTOMT-203ENST00000324866 UNC13AQ9UPW8 1703 aa15.23■□□□□ 0.03
LRTOMT-203ENST00000324866 CECR2Q9BXF3 1484 aa15.23■□□□□ 0.03
LRTOMT-203ENST00000324866 MROH2BQ7Z745 1585 aa15.2■□□□□ 0.02
LRTOMT-203ENST00000324866 BAZ1AQ9NRL2 1556 aaPredicted RBP15.18■□□□□ 0.02
LRTOMT-203ENST00000324866 WIZO95785 1651 aa15.1■□□□□ 0.01
LRTOMT-203ENST00000324866 SMARCA4P51532 1647 aa15.06■□□□□ 0
LRTOMT-203ENST00000324866 BICRAQ9NZM4 1560 aa15.05■□□□□ -0
LRTOMT-203ENST00000324866 TOP2AP11388 1531 aaKnown RBP14.99□□□□□ -0.01
LRTOMT-203ENST00000324866 PABPN1Q86U42 306 aaKnown RBP eCLIP14.96□□□□□ -0.01
LRTOMT-203ENST00000324866 EIF4G1Q04637 1599 aaKnown RBP14.94□□□□□ -0.02
LRTOMT-203ENST00000324866 PEG3Q9GZU2 1588 aa14.92□□□□□ -0.02
LRTOMT-203ENST00000324866 SMARCA2P51531 1590 aa14.86□□□□□ -0.03
LRTOMT-203ENST00000324866 TRIM41Q8WV44 630 aa14.83□□□□□ -0.04
LRTOMT-203ENST00000324866 CCDC88BA6NC98 1476 aa14.81□□□□□ -0.04
LRTOMT-203ENST00000324866 LOC105371045A0A1W2PR82 267 aa14.74□□□□□ -0.05
LRTOMT-203ENST00000324866 ATAD2BQ9ULI0 1458 aa14.7□□□□□ -0.06
LRTOMT-203ENST00000324866 BAZ1BQ9UIG0 1483 aaKnown RBP14.62□□□□□ -0.07
LRTOMT-203ENST00000324866 ABCC8Q09428 1581 aa14.58□□□□□ -0.08
LRTOMT-203ENST00000324866 HMGXB3Q12766 1538 aa14.57□□□□□ -0.08
LRTOMT-203ENST00000324866 NCAPD3P42695 1498 aa14.53□□□□□ -0.08
LRTOMT-203ENST00000324866 EEA1Q15075 1411 aa14.53□□□□□ -0.08
LRTOMT-203ENST00000324866 FAM9AQ8IZU1 332 aaPredicted RBP14.5□□□□□ -0.09
LRTOMT-203ENST00000324866 WRNQ14191 1432 aaPredicted RBP eCLIP14.47□□□□□ -0.09
LRTOMT-203ENST00000324866 PCGF6Q9BYE7 350 aa14.45□□□□□ -0.1
LRTOMT-203ENST00000324866 HRCP23327 699 aa14.44□□□□□ -0.1
LRTOMT-203ENST00000324866 TRIM26Q12899 539 aaPredicted RBP14.44□□□□□ -0.1
LRTOMT-203ENST00000324866 SYNJ1O43426 1573 aa14.42□□□□□ -0.1
LRTOMT-203ENST00000324866 SOGA1O94964 1423 aa14.4□□□□□ -0.11
LRTOMT-203ENST00000324866 BIVM-ERCC5R4GMW8 1640 aa14.36□□□□□ -0.11
LRTOMT-203ENST00000324866 TOP2BQ02880 1626 aa14.36□□□□□ -0.11
LRTOMT-203ENST00000324866 TNIKQ9UKE5 1360 aa14.35□□□□□ -0.11
LRTOMT-203ENST00000324866 CSRNP3Q8WYN3 585 aa14.33□□□□□ -0.12
LRTOMT-203ENST00000324866 KIF21BO75037 1637 aa14.33□□□□□ -0.12
LRTOMT-203ENST00000324866 PRDM2Q13029 1718 aa14.32□□□□□ -0.12
LRTOMT-203ENST00000324866 RUSC2Q8N2Y8 1516 aa14.32□□□□□ -0.12
LRTOMT-203ENST00000324866 CFTRP13569 1480 aa14.31□□□□□ -0.12
LRTOMT-203ENST00000324866 GOLGA3Q08378 1498 aa14.31□□□□□ -0.12
LRTOMT-203ENST00000324866 CC2D2AQ9P2K1 1620 aa14.3□□□□□ -0.12
LRTOMT-203ENST00000324866 CEP164Q9UPV0 1460 aa14.27□□□□□ -0.12
LRTOMT-203ENST00000324866 CEP162Q5TB80 1403 aa14.26□□□□□ -0.13
LRTOMT-203ENST00000324866 DNAJC5BQ9UF47 199 aa14.21□□□□□ -0.13
LRTOMT-203ENST00000324866 EHMT2Q96KQ7 1210 aa14.2□□□□□ -0.14
LRTOMT-203ENST00000324866 CUX1P39880 1505 aa14.2□□□□□ -0.14
LRTOMT-203ENST00000324866 ERICH3Q5RHP9 1530 aa14.16□□□□□ -0.14
LRTOMT-203ENST00000324866 CADPSQ9ULU8 1353 aa14.15□□□□□ -0.14
LRTOMT-203ENST00000324866 PRXQ9BXM0 1461 aa14.12□□□□□ -0.15
LRTOMT-203ENST00000324866 UBTFP17480 764 aaKnown RBP14.11□□□□□ -0.15
LRTOMT-203ENST00000324866 ZEB1P37275 1124 aaPredicted RBP14.11□□□□□ -0.15
LRTOMT-203ENST00000324866 RAPGEF2Q9Y4G8 1499 aa14.1□□□□□ -0.15
LRTOMT-203ENST00000324866 KIF27Q86VH2 1401 aa14.08□□□□□ -0.16
LRTOMT-203ENST00000324866 CLIP1P30622 1438 aa14.06□□□□□ -0.16
LRTOMT-203ENST00000324866 VPS8Q8N3P4 1428 aa14.02□□□□□ -0.16
LRTOMT-203ENST00000324866 FANCD2Q9BXW9 1451 aa13.99□□□□□ -0.17
LRTOMT-203ENST00000324866 DNMBPQ6XZF7 1577 aa13.98□□□□□ -0.17
LRTOMT-203ENST00000324866 LAMC3Q9Y6N6 1575 aa13.98□□□□□ -0.17
LRTOMT-203ENST00000324866 FGD5Q6ZNL6 1462 aa13.97□□□□□ -0.17
LRTOMT-203ENST00000324866 PPARGC1BQ86YN6 1023 aaKnown RBP13.95□□□□□ -0.18
LRTOMT-203ENST00000324866 CUX2O14529 1486 aa13.93□□□□□ -0.18
LRTOMT-203ENST00000324866 IGF1RP08069 1367 aa13.92□□□□□ -0.18
LRTOMT-203ENST00000324866 ARAP1Q96P48 1450 aa13.91□□□□□ -0.18
LRTOMT-203ENST00000324866 TOPBP1Q92547 1522 aa13.9□□□□□ -0.18
LRTOMT-203ENST00000324866 ABCA10Q8WWZ4 1543 aa13.9□□□□□ -0.19
LRTOMT-203ENST00000324866 NESP48681 1621 aa13.86□□□□□ -0.19
LRTOMT-203ENST00000324866 WDR97A6NE52 1622 aa13.85□□□□□ -0.19
LRTOMT-203ENST00000324866 POLA1P09884 1462 aaPredicted RBP13.85□□□□□ -0.19
LRTOMT-203ENST00000324866 CARMIL1Q5VZK9 1371 aa13.84□□□□□ -0.19
LRTOMT-203ENST00000324866 ARHGAP35Q9NRY4 1499 aa13.83□□□□□ -0.2
LRTOMT-203ENST00000324866 CUL7Q14999 1698 aa13.82□□□□□ -0.2
LRTOMT-203ENST00000324866 PDS5BQ9NTI5 1447 aa13.81□□□□□ -0.2
LRTOMT-203ENST00000324866 URB2Q14146 1524 aaKnown RBP13.81□□□□□ -0.2
LRTOMT-203ENST00000324866 APLP2Q06481 763 aa13.8□□□□□ -0.2
LRTOMT-203ENST00000324866 MAP3K1Q13233 1512 aa13.79□□□□□ -0.2
LRTOMT-203ENST00000324866 RAD54L2Q9Y4B4 1467 aa13.77□□□□□ -0.2
LRTOMT-203ENST00000324866 ABCA5Q8WWZ7 1642 aa13.76□□□□□ -0.21
LRTOMT-203ENST00000324866 CCER1Q8TC90 406 aaPredicted RBP13.74□□□□□ -0.21
LRTOMT-203ENST00000324866 KIF21AQ7Z4S6 1674 aa13.74□□□□□ -0.21
LRTOMT-203ENST00000324866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.74□□□□□ -0.21
LRTOMT-203ENST00000324866 CTTNBP2Q8WZ74 1663 aa13.72□□□□□ -0.21
LRTOMT-203ENST00000324866 EFCAB5A4FU69 1503 aa13.72□□□□□ -0.21
LRTOMT-203ENST00000324866 TTBK1Q5TCY1 1321 aaPredicted RBP13.72□□□□□ -0.21
LRTOMT-203ENST00000324866 RRBP1Q9P2E9 1410 aaKnown RBP13.69□□□□□ -0.22
LRTOMT-203ENST00000324866 TARBP1Q13395 1621 aaKnown RBP13.69□□□□□ -0.22
LRTOMT-203ENST00000324866 FHAD1B1AJZ9 1412 aa13.68□□□□□ -0.22
LRTOMT-203ENST00000324866 RANGAP1P46060 587 aaPredicted RBP13.68□□□□□ -0.22
LRTOMT-203ENST00000324866 TIAM1Q13009 1591 aa13.68□□□□□ -0.22
LRTOMT-203ENST00000324866 AQRO60306 1485 aaKnown RBP eCLIP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms