RNA–Protein interactions for RNA: ENST00000322282.11

GRAMD1B-201, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-201ENST00000322282 NISCHQ9Y2I1 1504 aa26.51■■□□□ 1.83
GRAMD1B-201ENST00000322282 CCDC180Q9P1Z9 1646 aa22.89■■□□□ 1.25
GRAMD1B-201ENST00000322282 ZCCHC6Q5VYS8 1495 aaKnown RBP22.39■■□□□ 1.17
GRAMD1B-201ENST00000322282 SHROOM4Q9ULL8 1493 aa21.99■■□□□ 1.11
GRAMD1B-201ENST00000322282 DCAF1Q9Y4B6 1507 aa21.93■■□□□ 1.1
GRAMD1B-201ENST00000322282 DCAF8L2P0C7V8 631 aa21.67■■□□□ 1.06
GRAMD1B-201ENST00000322282 MYO15BQ96JP2 1530 aa21.46■■□□□ 1.03
GRAMD1B-201ENST00000322282 SUPT5HO00267 1087 aaKnown RBP21.42■■□□□ 1.02
GRAMD1B-201ENST00000322282 ABCC9O60706 1549 aa21.18■□□□□ 0.98
GRAMD1B-201ENST00000322282 NACADO15069 1562 aa21.17■□□□□ 0.98
GRAMD1B-201ENST00000322282 SCRIBQ14160 1630 aa21.11■□□□□ 0.97
GRAMD1B-201ENST00000322282 RB1CC1Q8TDY2 1594 aa20.86■□□□□ 0.93
GRAMD1B-201ENST00000322282 CHIC1Q5VXU3 224 aa20.81■□□□□ 0.92
GRAMD1B-201ENST00000322282 RSF1Q96T23 1441 aaPredicted RBP20.77■□□□□ 0.92
GRAMD1B-201ENST00000322282 CECR2Q9BXF3 1484 aa20.55■□□□□ 0.88
GRAMD1B-201ENST00000322282 UNC13AQ9UPW8 1703 aa20.53■□□□□ 0.88
GRAMD1B-201ENST00000322282 MROH2BQ7Z745 1585 aa20.51■□□□□ 0.87
GRAMD1B-201ENST00000322282 BAZ1AQ9NRL2 1556 aaPredicted RBP20.43■□□□□ 0.86
GRAMD1B-201ENST00000322282 WIZO95785 1651 aa20.39■□□□□ 0.85
GRAMD1B-201ENST00000322282 SMARCA4P51532 1647 aa20.28■□□□□ 0.84
GRAMD1B-201ENST00000322282 BICRAQ9NZM4 1560 aa20.23■□□□□ 0.83
GRAMD1B-201ENST00000322282 TOP2AP11388 1531 aaKnown RBP20.18■□□□□ 0.82
GRAMD1B-201ENST00000322282 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
GRAMD1B-201ENST00000322282 EIF4G1Q04637 1599 aaKnown RBP20.09■□□□□ 0.81
GRAMD1B-201ENST00000322282 LOC105371045A0A1W2PR82 267 aa20.03■□□□□ 0.8
GRAMD1B-201ENST00000322282 PEG3Q9GZU2 1588 aa20.01■□□□□ 0.79
GRAMD1B-201ENST00000322282 SMARCA2P51531 1590 aa20.01■□□□□ 0.79
GRAMD1B-201ENST00000322282 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
GRAMD1B-201ENST00000322282 CCDC88BA6NC98 1476 aa19.97■□□□□ 0.79
GRAMD1B-201ENST00000322282 ATAD2BQ9ULI0 1458 aa19.79■□□□□ 0.76
GRAMD1B-201ENST00000322282 FAM9AQ8IZU1 332 aaPredicted RBP19.74■□□□□ 0.75
GRAMD1B-201ENST00000322282 ABCC8Q09428 1581 aa19.74■□□□□ 0.75
GRAMD1B-201ENST00000322282 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
GRAMD1B-201ENST00000322282 PCGF6Q9BYE7 350 aa19.69■□□□□ 0.74
GRAMD1B-201ENST00000322282 HRCP23327 699 aa19.59■□□□□ 0.73
GRAMD1B-201ENST00000322282 TRIM26Q12899 539 aaPredicted RBP19.57■□□□□ 0.72
GRAMD1B-201ENST00000322282 HMGXB3Q12766 1538 aa19.56■□□□□ 0.72
GRAMD1B-201ENST00000322282 EEA1Q15075 1411 aa19.56■□□□□ 0.72
GRAMD1B-201ENST00000322282 WRNQ14191 1432 aaPredicted RBP eCLIP19.53■□□□□ 0.72
GRAMD1B-201ENST00000322282 NCAPD3P42695 1498 aa19.52■□□□□ 0.72
GRAMD1B-201ENST00000322282 SOGA1O94964 1423 aa19.46■□□□□ 0.71
GRAMD1B-201ENST00000322282 SYNJ1O43426 1573 aa19.45■□□□□ 0.7
GRAMD1B-201ENST00000322282 EHMT2Q96KQ7 1210 aa19.43■□□□□ 0.7
GRAMD1B-201ENST00000322282 RUSC2Q8N2Y8 1516 aa19.37■□□□□ 0.69
GRAMD1B-201ENST00000322282 CSRNP3Q8WYN3 585 aa19.37■□□□□ 0.69
GRAMD1B-201ENST00000322282 TNIKQ9UKE5 1360 aa19.35■□□□□ 0.69
GRAMD1B-201ENST00000322282 TOP2BQ02880 1626 aa19.34■□□□□ 0.69
GRAMD1B-201ENST00000322282 BIVM-ERCC5R4GMW8 1640 aa19.32■□□□□ 0.68
GRAMD1B-201ENST00000322282 GOLGA3Q08378 1498 aa19.3■□□□□ 0.68
GRAMD1B-201ENST00000322282 KIF21BO75037 1637 aa19.29■□□□□ 0.68
GRAMD1B-201ENST00000322282 CEP162Q5TB80 1403 aa19.28■□□□□ 0.68
GRAMD1B-201ENST00000322282 PRDM2Q13029 1718 aa19.26■□□□□ 0.67
GRAMD1B-201ENST00000322282 CEP164Q9UPV0 1460 aa19.25■□□□□ 0.67
GRAMD1B-201ENST00000322282 CFTRP13569 1480 aa19.25■□□□□ 0.67
GRAMD1B-201ENST00000322282 UBTFP17480 764 aaKnown RBP19.16■□□□□ 0.66
GRAMD1B-201ENST00000322282 CC2D2AQ9P2K1 1620 aa19.15■□□□□ 0.66
GRAMD1B-201ENST00000322282 DNAJC5BQ9UF47 199 aa19.14■□□□□ 0.65
GRAMD1B-201ENST00000322282 CUX1P39880 1505 aa19.14■□□□□ 0.65
GRAMD1B-201ENST00000322282 ZEB1P37275 1124 aaPredicted RBP19.08■□□□□ 0.65
GRAMD1B-201ENST00000322282 CADPSQ9ULU8 1353 aa19.05■□□□□ 0.64
GRAMD1B-201ENST00000322282 ERICH3Q5RHP9 1530 aa19.05■□□□□ 0.64
GRAMD1B-201ENST00000322282 RAPGEF2Q9Y4G8 1499 aa19.05■□□□□ 0.64
GRAMD1B-201ENST00000322282 PPARGC1BQ86YN6 1023 aaKnown RBP19.03■□□□□ 0.64
GRAMD1B-201ENST00000322282 PRXQ9BXM0 1461 aa19.01■□□□□ 0.63
GRAMD1B-201ENST00000322282 CLIP1P30622 1438 aa19■□□□□ 0.63
GRAMD1B-201ENST00000322282 KIF27Q86VH2 1401 aa18.98■□□□□ 0.63
GRAMD1B-201ENST00000322282 VPS8Q8N3P4 1428 aa18.93■□□□□ 0.62
GRAMD1B-201ENST00000322282 FANCD2Q9BXW9 1451 aa18.85■□□□□ 0.61
GRAMD1B-201ENST00000322282 FGD5Q6ZNL6 1462 aa18.84■□□□□ 0.61
GRAMD1B-201ENST00000322282 CUX2O14529 1486 aa18.81■□□□□ 0.6
GRAMD1B-201ENST00000322282 DNMBPQ6XZF7 1577 aa18.8■□□□□ 0.6
GRAMD1B-201ENST00000322282 LAMC3Q9Y6N6 1575 aa18.79■□□□□ 0.6
GRAMD1B-201ENST00000322282 ARAP1Q96P48 1450 aa18.76■□□□□ 0.59
GRAMD1B-201ENST00000322282 IGF1RP08069 1367 aa18.76■□□□□ 0.59
GRAMD1B-201ENST00000322282 TTBK1Q5TCY1 1321 aaPredicted RBP18.75■□□□□ 0.59
GRAMD1B-201ENST00000322282 APLP2Q06481 763 aa18.73■□□□□ 0.59
GRAMD1B-201ENST00000322282 TOPBP1Q92547 1522 aa18.72■□□□□ 0.59
GRAMD1B-201ENST00000322282 NESP48681 1621 aa18.72■□□□□ 0.59
GRAMD1B-201ENST00000322282 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.69■□□□□ 0.58
GRAMD1B-201ENST00000322282 ABCA10Q8WWZ4 1543 aa18.69■□□□□ 0.58
GRAMD1B-201ENST00000322282 CCER1Q8TC90 406 aaPredicted RBP18.68■□□□□ 0.58
GRAMD1B-201ENST00000322282 CARMIL1Q5VZK9 1371 aa18.68■□□□□ 0.58
GRAMD1B-201ENST00000322282 POLA1P09884 1462 aaPredicted RBP18.67■□□□□ 0.58
GRAMD1B-201ENST00000322282 RANGAP1P46060 587 aaPredicted RBP18.67■□□□□ 0.58
GRAMD1B-201ENST00000322282 ARHGAP35Q9NRY4 1499 aa18.66■□□□□ 0.58
GRAMD1B-201ENST00000322282 WDR97A6NE52 1622 aa18.62■□□□□ 0.57
GRAMD1B-201ENST00000322282 CUL7Q14999 1698 aa18.61■□□□□ 0.57
GRAMD1B-201ENST00000322282 RAD54L2Q9Y4B4 1467 aa18.61■□□□□ 0.57
GRAMD1B-201ENST00000322282 PDS5BQ9NTI5 1447 aa18.6■□□□□ 0.57
GRAMD1B-201ENST00000322282 URB2Q14146 1524 aaKnown RBP18.6■□□□□ 0.57
GRAMD1B-201ENST00000322282 KIF21AQ7Z4S6 1674 aa18.54■□□□□ 0.56
GRAMD1B-201ENST00000322282 MAP3K1Q13233 1512 aa18.53■□□□□ 0.56
GRAMD1B-201ENST00000322282 ABCA5Q8WWZ7 1642 aa18.51■□□□□ 0.55
GRAMD1B-201ENST00000322282 CTTNBP2Q8WZ74 1663 aa18.5■□□□□ 0.55
GRAMD1B-201ENST00000322282 KANK4Q5T7N3 995 aaPredicted RBP18.47■□□□□ 0.55
GRAMD1B-201ENST00000322282 HNRNPUL2Q1KMD3 747 aaKnown RBP18.46■□□□□ 0.55
GRAMD1B-201ENST00000322282 RRBP1Q9P2E9 1410 aaKnown RBP18.46■□□□□ 0.55
GRAMD1B-201ENST00000322282 EFCAB5A4FU69 1503 aa18.46■□□□□ 0.55
GRAMD1B-201ENST00000322282 TIAM1Q13009 1591 aa18.45■□□□□ 0.54
GRAMD1B-201ENST00000322282 FHAD1B1AJZ9 1412 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms