RNA–Protein interactions for RNA: ENST00000311337.10

GNPDA1-201, Transcript of glucosamine-6-phosphate deaminase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNPDA1, Length 2,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPDA1-201ENST00000311337 NISCHQ9Y2I1 1504 aa23.35■■□□□ 1.33
GNPDA1-201ENST00000311337 CCDC180Q9P1Z9 1646 aa20.38■□□□□ 0.85
GNPDA1-201ENST00000311337 ABCC9O60706 1549 aa20.2■□□□□ 0.82
GNPDA1-201ENST00000311337 DCAF8L2P0C7V8 631 aa19.91■□□□□ 0.78
GNPDA1-201ENST00000311337 ZCCHC6Q5VYS8 1495 aaKnown RBP19.47■□□□□ 0.71
GNPDA1-201ENST00000311337 RB1CC1Q8TDY2 1594 aa19.16■□□□□ 0.66
GNPDA1-201ENST00000311337 SHROOM4Q9ULL8 1493 aa19.16■□□□□ 0.66
GNPDA1-201ENST00000311337 NACADO15069 1562 aa19.15■□□□□ 0.66
GNPDA1-201ENST00000311337 PABPN1Q86U42 306 aaKnown RBP eCLIP19.09■□□□□ 0.65
GNPDA1-201ENST00000311337 SCRIBQ14160 1630 aa19.04■□□□□ 0.64
GNPDA1-201ENST00000311337 DCAF1Q9Y4B6 1507 aa19.04■□□□□ 0.64
GNPDA1-201ENST00000311337 UNC13AQ9UPW8 1703 aa18.96■□□□□ 0.63
GNPDA1-201ENST00000311337 MYO15BQ96JP2 1530 aa18.95■□□□□ 0.62
GNPDA1-201ENST00000311337 BICRAQ9NZM4 1560 aa18.77■□□□□ 0.6
GNPDA1-201ENST00000311337 DNAJC5BQ9UF47 199 aa18.49■□□□□ 0.55
GNPDA1-201ENST00000311337 CECR2Q9BXF3 1484 aa18.42■□□□□ 0.54
GNPDA1-201ENST00000311337 EIF4G1Q04637 1599 aaKnown RBP18.22■□□□□ 0.51
GNPDA1-201ENST00000311337 MROH2BQ7Z745 1585 aa18.17■□□□□ 0.5
GNPDA1-201ENST00000311337 CC2D2AQ9P2K1 1620 aa18.13■□□□□ 0.49
GNPDA1-201ENST00000311337 SUPT5HO00267 1087 aaKnown RBP18.12■□□□□ 0.49
GNPDA1-201ENST00000311337 SMARCA4P51532 1647 aa18.06■□□□□ 0.48
GNPDA1-201ENST00000311337 WIZO95785 1651 aa18.02■□□□□ 0.47
GNPDA1-201ENST00000311337 RSF1Q96T23 1441 aaPredicted RBP18.01■□□□□ 0.47
GNPDA1-201ENST00000311337 BAZ1AQ9NRL2 1556 aaPredicted RBP17.99■□□□□ 0.47
GNPDA1-201ENST00000311337 ATAD2BQ9ULI0 1458 aa17.92■□□□□ 0.46
GNPDA1-201ENST00000311337 BAZ1BQ9UIG0 1483 aaKnown RBP17.78■□□□□ 0.44
GNPDA1-201ENST00000311337 NCAPD3P42695 1498 aa17.76■□□□□ 0.43
GNPDA1-201ENST00000311337 SMARCA2P51531 1590 aa17.74■□□□□ 0.43
GNPDA1-201ENST00000311337 PEG3Q9GZU2 1588 aa17.71■□□□□ 0.43
GNPDA1-201ENST00000311337 NESP48681 1621 aa17.62■□□□□ 0.41
GNPDA1-201ENST00000311337 HMGXB3Q12766 1538 aa17.61■□□□□ 0.41
GNPDA1-201ENST00000311337 TOP2AP11388 1531 aaKnown RBP17.59■□□□□ 0.41
GNPDA1-201ENST00000311337 CCDC88BA6NC98 1476 aa17.56■□□□□ 0.4
GNPDA1-201ENST00000311337 CADPSQ9ULU8 1353 aa17.34■□□□□ 0.37
GNPDA1-201ENST00000311337 CFTRP13569 1480 aa17.27■□□□□ 0.36
GNPDA1-201ENST00000311337 KIF21AQ7Z4S6 1674 aa17.25■□□□□ 0.35
GNPDA1-201ENST00000311337 ERCC6Q03468 1493 aa17.24■□□□□ 0.35
GNPDA1-201ENST00000311337 SLC24A1O60721 1099 aa17.23■□□□□ 0.35
GNPDA1-201ENST00000311337 FANCD2Q9BXW9 1451 aa17.19■□□□□ 0.34
GNPDA1-201ENST00000311337 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
GNPDA1-201ENST00000311337 ABCC8Q09428 1581 aa17.18■□□□□ 0.34
GNPDA1-201ENST00000311337 PDS5BQ9NTI5 1447 aa17.12■□□□□ 0.33
GNPDA1-201ENST00000311337 CEP164Q9UPV0 1460 aa17.08■□□□□ 0.32
GNPDA1-201ENST00000311337 URB2Q14146 1524 aaKnown RBP17.06■□□□□ 0.32
GNPDA1-201ENST00000311337 PRDM2Q13029 1718 aa17.01■□□□□ 0.31
GNPDA1-201ENST00000311337 THOC2Q8NI27 1593 aaKnown RBP17■□□□□ 0.31
GNPDA1-201ENST00000311337 CUX1P39880 1505 aa16.98■□□□□ 0.31
GNPDA1-201ENST00000311337 CHIC1Q5VXU3 224 aa16.96■□□□□ 0.31
GNPDA1-201ENST00000311337 SYNJ1O43426 1573 aa16.96■□□□□ 0.31
GNPDA1-201ENST00000311337 MRC2Q9UBG0 1479 aa16.96■□□□□ 0.3
GNPDA1-201ENST00000311337 TOPBP1Q92547 1522 aa16.94■□□□□ 0.3
GNPDA1-201ENST00000311337 RAD54L2Q9Y4B4 1467 aa16.93■□□□□ 0.3
GNPDA1-201ENST00000311337 WRNQ14191 1432 aaPredicted RBP eCLIP16.92■□□□□ 0.3
GNPDA1-201ENST00000311337 TRIM41Q8WV44 630 aa16.87■□□□□ 0.29
GNPDA1-201ENST00000311337 WDR62O43379 1518 aa16.87■□□□□ 0.29
GNPDA1-201ENST00000311337 CUX2O14529 1486 aa16.87■□□□□ 0.29
GNPDA1-201ENST00000311337 FGD5Q6ZNL6 1462 aa16.86■□□□□ 0.29
GNPDA1-201ENST00000311337 POLA1P09884 1462 aaPredicted RBP16.85■□□□□ 0.29
GNPDA1-201ENST00000311337 ZNF608Q9ULD9 1512 aaPredicted RBP16.85■□□□□ 0.29
GNPDA1-201ENST00000311337 EHMT2Q96KQ7 1210 aa16.84■□□□□ 0.29
GNPDA1-201ENST00000311337 TDRD9Q8NDG6 1382 aaKnown RBP16.83■□□□□ 0.29
GNPDA1-201ENST00000311337 FAM9AQ8IZU1 332 aaPredicted RBP16.83■□□□□ 0.28
GNPDA1-201ENST00000311337 DNMBPQ6XZF7 1577 aa16.83■□□□□ 0.28
GNPDA1-201ENST00000311337 AQRO60306 1485 aaKnown RBP eCLIP16.8■□□□□ 0.28
GNPDA1-201ENST00000311337 SOGA1O94964 1423 aa16.78■□□□□ 0.28
GNPDA1-201ENST00000311337 RUSC2Q8N2Y8 1516 aa16.77■□□□□ 0.28
GNPDA1-201ENST00000311337 TOP2BQ02880 1626 aa16.77■□□□□ 0.28
GNPDA1-201ENST00000311337 BIVM-ERCC5R4GMW8 1640 aa16.71■□□□□ 0.27
GNPDA1-201ENST00000311337 TARBP1Q13395 1621 aaKnown RBP16.71■□□□□ 0.27
GNPDA1-201ENST00000311337 FBLN2P98095 1184 aa16.66■□□□□ 0.26
GNPDA1-201ENST00000311337 EIF4G3O43432 1585 aaKnown RBP16.63■□□□□ 0.25
GNPDA1-201ENST00000311337 IFT140Q96RY7 1462 aa16.63■□□□□ 0.25
GNPDA1-201ENST00000311337 ABCA10Q8WWZ4 1543 aa16.57■□□□□ 0.24
GNPDA1-201ENST00000311337 WDR97A6NE52 1622 aa16.56■□□□□ 0.24
GNPDA1-201ENST00000311337 GAPVD1Q14C86 1478 aa16.56■□□□□ 0.24
GNPDA1-201ENST00000311337 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
GNPDA1-201ENST00000311337 ABCA5Q8WWZ7 1642 aa16.5■□□□□ 0.23
GNPDA1-201ENST00000311337 IGF1RP08069 1367 aa16.49■□□□□ 0.23
GNPDA1-201ENST00000311337 RANGAP1P46060 587 aaPredicted RBP16.49■□□□□ 0.23
GNPDA1-201ENST00000311337 KIF27Q86VH2 1401 aa16.47■□□□□ 0.23
GNPDA1-201ENST00000311337 LOC105371045A0A1W2PR82 267 aa16.47■□□□□ 0.23
GNPDA1-201ENST00000311337 PBRM1Q86U86 1689 aa16.46■□□□□ 0.23
GNPDA1-201ENST00000311337 CHMP7Q8WUX9 453 aaPredicted RBP16.45■□□□□ 0.22
GNPDA1-201ENST00000311337 GRIN2BQ13224 1484 aa16.43■□□□□ 0.22
GNPDA1-201ENST00000311337 HRCP23327 699 aa16.43■□□□□ 0.22
GNPDA1-201ENST00000311337 CSRNP3Q8WYN3 585 aa16.42■□□□□ 0.22
GNPDA1-201ENST00000311337 CHD1O14646 1710 aa16.4■□□□□ 0.22
GNPDA1-201ENST00000311337 CARMIL1Q5VZK9 1371 aa16.37■□□□□ 0.21
GNPDA1-201ENST00000311337 RAPGEF2Q9Y4G8 1499 aa16.36■□□□□ 0.21
GNPDA1-201ENST00000311337 TTBK1Q5TCY1 1321 aaPredicted RBP16.35■□□□□ 0.21
GNPDA1-201ENST00000311337 ADAMTS12P58397 1594 aa16.33■□□□□ 0.2
GNPDA1-201ENST00000311337 ERICH3Q5RHP9 1530 aa16.32■□□□□ 0.2
GNPDA1-201ENST00000311337 SYNJ2O15056 1496 aa16.31■□□□□ 0.2
GNPDA1-201ENST00000311337 OSCARQ8IYS5 282 aa16.3■□□□□ 0.2
GNPDA1-201ENST00000311337 MAGI1Q96QZ7 1491 aaPredicted RBP16.3■□□□□ 0.2
GNPDA1-201ENST00000311337 GRIN2AQ12879 1464 aa16.29■□□□□ 0.2
GNPDA1-201ENST00000311337 FHAD1B1AJZ9 1412 aa16.29■□□□□ 0.2
GNPDA1-201ENST00000311337 UBTFP17480 764 aaKnown RBP16.28■□□□□ 0.2
GNPDA1-201ENST00000311337 CEP170Q5SW79 1584 aa16.27■□□□□ 0.2
GNPDA1-201ENST00000311337 PRXQ9BXM0 1461 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms