RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 NISCHQ9Y2I1 1504 aa20.97■□□□□ 0.95
VPREB1-201ENST00000302273 CCDC180Q9P1Z9 1646 aa18.5■□□□□ 0.55
VPREB1-201ENST00000302273 ABCC9O60706 1549 aa17.83■□□□□ 0.45
VPREB1-201ENST00000302273 MYO15BQ96JP2 1530 aa17.51■□□□□ 0.39
VPREB1-201ENST00000302273 ZCCHC6Q5VYS8 1495 aaKnown RBP17.5■□□□□ 0.39
VPREB1-201ENST00000302273 DCAF1Q9Y4B6 1507 aa17.46■□□□□ 0.39
VPREB1-201ENST00000302273 NACADO15069 1562 aa17.43■□□□□ 0.38
VPREB1-201ENST00000302273 DCAF8L2P0C7V8 631 aa17.38■□□□□ 0.37
VPREB1-201ENST00000302273 RB1CC1Q8TDY2 1594 aa17.35■□□□□ 0.37
VPREB1-201ENST00000302273 SHROOM4Q9ULL8 1493 aa16.81■□□□□ 0.28
VPREB1-201ENST00000302273 SCRIBQ14160 1630 aa16.78■□□□□ 0.28
VPREB1-201ENST00000302273 DNAJC5BQ9UF47 199 aa16.76■□□□□ 0.27
VPREB1-201ENST00000302273 PABPN1Q86U42 306 aaKnown RBP eCLIP16.73■□□□□ 0.27
VPREB1-201ENST00000302273 BICRAQ9NZM4 1560 aa16.72■□□□□ 0.27
VPREB1-201ENST00000302273 UNC13AQ9UPW8 1703 aa16.72■□□□□ 0.27
VPREB1-201ENST00000302273 EIF4G1Q04637 1599 aaKnown RBP16.31■□□□□ 0.2
VPREB1-201ENST00000302273 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
VPREB1-201ENST00000302273 CECR2Q9BXF3 1484 aa16.22■□□□□ 0.19
VPREB1-201ENST00000302273 SMARCA4P51532 1647 aa16.15■□□□□ 0.18
VPREB1-201ENST00000302273 CC2D2AQ9P2K1 1620 aa16.15■□□□□ 0.18
VPREB1-201ENST00000302273 NCAPD3P42695 1498 aa16.12■□□□□ 0.17
VPREB1-201ENST00000302273 SMARCA2P51531 1590 aa16.1■□□□□ 0.17
VPREB1-201ENST00000302273 PEG3Q9GZU2 1588 aa16.09■□□□□ 0.17
VPREB1-201ENST00000302273 ATAD2BQ9ULI0 1458 aa16.09■□□□□ 0.17
VPREB1-201ENST00000302273 MROH2BQ7Z745 1585 aa16.09■□□□□ 0.17
VPREB1-201ENST00000302273 RSF1Q96T23 1441 aaPredicted RBP16.06■□□□□ 0.16
VPREB1-201ENST00000302273 HMGXB3Q12766 1538 aa15.99■□□□□ 0.15
VPREB1-201ENST00000302273 BAZ1BQ9UIG0 1483 aaKnown RBP15.95■□□□□ 0.14
VPREB1-201ENST00000302273 WIZO95785 1651 aa15.85■□□□□ 0.13
VPREB1-201ENST00000302273 TOP2AP11388 1531 aaKnown RBP15.8■□□□□ 0.12
VPREB1-201ENST00000302273 SUPT5HO00267 1087 aaKnown RBP15.75■□□□□ 0.11
VPREB1-201ENST00000302273 CADPSQ9ULU8 1353 aa15.65■□□□□ 0.1
VPREB1-201ENST00000302273 DNAJC5Q9H3Z4 198 aa15.64■□□□□ 0.09
VPREB1-201ENST00000302273 CCDC88BA6NC98 1476 aa15.63■□□□□ 0.09
VPREB1-201ENST00000302273 LAMC3Q9Y6N6 1575 aa15.59■□□□□ 0.09
VPREB1-201ENST00000302273 CFTRP13569 1480 aa15.59■□□□□ 0.09
VPREB1-201ENST00000302273 PDS5BQ9NTI5 1447 aa15.55■□□□□ 0.08
VPREB1-201ENST00000302273 NESP48681 1621 aa15.46■□□□□ 0.07
VPREB1-201ENST00000302273 ERCC6Q03468 1493 aa15.42■□□□□ 0.06
VPREB1-201ENST00000302273 FANCD2Q9BXW9 1451 aa15.4■□□□□ 0.06
VPREB1-201ENST00000302273 CEP164Q9UPV0 1460 aa15.35■□□□□ 0.05
VPREB1-201ENST00000302273 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
VPREB1-201ENST00000302273 CUX2O14529 1486 aa15.29■□□□□ 0.04
VPREB1-201ENST00000302273 MRC2Q9UBG0 1479 aa15.29■□□□□ 0.04
VPREB1-201ENST00000302273 PRDM2Q13029 1718 aa15.27■□□□□ 0.04
VPREB1-201ENST00000302273 WDR62O43379 1518 aa15.22■□□□□ 0.03
VPREB1-201ENST00000302273 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
VPREB1-201ENST00000302273 THOC2Q8NI27 1593 aaKnown RBP15.19■□□□□ 0.02
VPREB1-201ENST00000302273 URB2Q14146 1524 aaKnown RBP15.17■□□□□ 0.02
VPREB1-201ENST00000302273 TOPBP1Q92547 1522 aa15.16■□□□□ 0.02
VPREB1-201ENST00000302273 DNMBPQ6XZF7 1577 aa15.15■□□□□ 0.02
VPREB1-201ENST00000302273 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
VPREB1-201ENST00000302273 IFT140Q96RY7 1462 aa15.08■□□□□ 0
VPREB1-201ENST00000302273 CUX1P39880 1505 aa15.07■□□□□ 0
VPREB1-201ENST00000302273 TOP2BQ02880 1626 aa15.04■□□□□ -0
VPREB1-201ENST00000302273 POLA1P09884 1462 aaPredicted RBP15.04■□□□□ -0
VPREB1-201ENST00000302273 SOGA1O94964 1423 aa15.04■□□□□ -0
VPREB1-201ENST00000302273 FGD5Q6ZNL6 1462 aa15.01□□□□□ -0.01
VPREB1-201ENST00000302273 BIVM-ERCC5R4GMW8 1640 aa14.99□□□□□ -0.01
VPREB1-201ENST00000302273 TRIM41Q8WV44 630 aa14.97□□□□□ -0.01
VPREB1-201ENST00000302273 SYNJ1O43426 1573 aa14.97□□□□□ -0.01
VPREB1-201ENST00000302273 WDR97A6NE52 1622 aa14.96□□□□□ -0.01
VPREB1-201ENST00000302273 ABCA10Q8WWZ4 1543 aa14.96□□□□□ -0.02
VPREB1-201ENST00000302273 TARBP1Q13395 1621 aaKnown RBP14.93□□□□□ -0.02
VPREB1-201ENST00000302273 RAD54L2Q9Y4B4 1467 aa14.92□□□□□ -0.02
VPREB1-201ENST00000302273 CHIC1Q5VXU3 224 aa14.89□□□□□ -0.03
VPREB1-201ENST00000302273 TDRD9Q8NDG6 1382 aaKnown RBP14.87□□□□□ -0.03
VPREB1-201ENST00000302273 ZNF608Q9ULD9 1512 aaPredicted RBP14.87□□□□□ -0.03
VPREB1-201ENST00000302273 KIF27Q86VH2 1401 aa14.86□□□□□ -0.03
VPREB1-201ENST00000302273 AQRO60306 1485 aaKnown RBP eCLIP14.85□□□□□ -0.03
VPREB1-201ENST00000302273 GAPVD1Q14C86 1478 aa14.85□□□□□ -0.03
VPREB1-201ENST00000302273 GRIN2BQ13224 1484 aa14.84□□□□□ -0.03
VPREB1-201ENST00000302273 EIF4G3O43432 1585 aaKnown RBP14.79□□□□□ -0.04
VPREB1-201ENST00000302273 MAGI1Q96QZ7 1491 aaPredicted RBP14.79□□□□□ -0.04
VPREB1-201ENST00000302273 ERICH3Q5RHP9 1530 aa14.78□□□□□ -0.04
VPREB1-201ENST00000302273 EEA1Q15075 1411 aa14.78□□□□□ -0.04
VPREB1-201ENST00000302273 ABCA5Q8WWZ7 1642 aa14.77□□□□□ -0.04
VPREB1-201ENST00000302273 IGF1RP08069 1367 aa14.76□□□□□ -0.05
VPREB1-201ENST00000302273 OSCARQ8IYS5 282 aa14.75□□□□□ -0.05
VPREB1-201ENST00000302273 FHAD1B1AJZ9 1412 aa14.73□□□□□ -0.05
VPREB1-201ENST00000302273 CHMP7Q8WUX9 453 aaPredicted RBP14.72□□□□□ -0.05
VPREB1-201ENST00000302273 SYNJ2O15056 1496 aa14.71□□□□□ -0.05
VPREB1-201ENST00000302273 SNAPC4Q5SXM2 1469 aa14.69□□□□□ -0.06
VPREB1-201ENST00000302273 CSRNP3Q8WYN3 585 aa14.69□□□□□ -0.06
VPREB1-201ENST00000302273 CARMIL1Q5VZK9 1371 aa14.67□□□□□ -0.06
VPREB1-201ENST00000302273 FBLN2P98095 1184 aa14.65□□□□□ -0.06
VPREB1-201ENST00000302273 CUL7Q14999 1698 aa14.63□□□□□ -0.07
VPREB1-201ENST00000302273 PBRM1Q86U86 1689 aa14.63□□□□□ -0.07
VPREB1-201ENST00000302273 RUSC2Q8N2Y8 1516 aa14.61□□□□□ -0.07
VPREB1-201ENST00000302273 ADAMTS12P58397 1594 aa14.61□□□□□ -0.07
VPREB1-201ENST00000302273 GRIN2AQ12879 1464 aa14.61□□□□□ -0.07
VPREB1-201ENST00000302273 PRXQ9BXM0 1461 aa14.61□□□□□ -0.07
VPREB1-201ENST00000302273 RAPGEF2Q9Y4G8 1499 aa14.6□□□□□ -0.07
VPREB1-201ENST00000302273 NUP160Q12769 1436 aa14.58□□□□□ -0.08
VPREB1-201ENST00000302273 KIAA0586Q9BVV6 1533 aa14.51□□□□□ -0.09
VPREB1-201ENST00000302273 FAM9AQ8IZU1 332 aaPredicted RBP14.5□□□□□ -0.09
VPREB1-201ENST00000302273 CHD1O14646 1710 aa14.48□□□□□ -0.09
VPREB1-201ENST00000302273 CLASP1Q7Z460 1538 aa14.47□□□□□ -0.09
VPREB1-201ENST00000302273 JPH4Q96JJ6 628 aa14.47□□□□□ -0.09
VPREB1-201ENST00000302273 KIF21BO75037 1637 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms