RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 NISCHQ9Y2I1 1504 aa25.33■■□□□ 1.64
VWA3A-201ENST00000299840 CCDC180Q9P1Z9 1646 aa22.57■■□□□ 1.2
VWA3A-201ENST00000299840 ABCC9O60706 1549 aa21.85■■□□□ 1.09
VWA3A-201ENST00000299840 NACADO15069 1562 aa21.17■□□□□ 0.98
VWA3A-201ENST00000299840 RB1CC1Q8TDY2 1594 aa21.15■□□□□ 0.98
VWA3A-201ENST00000299840 ZCCHC6Q5VYS8 1495 aaKnown RBP21.12■□□□□ 0.97
VWA3A-201ENST00000299840 MYO15BQ96JP2 1530 aa21.11■□□□□ 0.97
VWA3A-201ENST00000299840 DCAF1Q9Y4B6 1507 aa21.03■□□□□ 0.96
VWA3A-201ENST00000299840 DCAF8L2P0C7V8 631 aa20.95■□□□□ 0.94
VWA3A-201ENST00000299840 UNC13AQ9UPW8 1703 aa20.73■□□□□ 0.91
VWA3A-201ENST00000299840 BICRAQ9NZM4 1560 aa20.52■□□□□ 0.87
VWA3A-201ENST00000299840 SCRIBQ14160 1630 aa20.47■□□□□ 0.87
VWA3A-201ENST00000299840 PABPN1Q86U42 306 aaKnown RBP eCLIP20.39■□□□□ 0.85
VWA3A-201ENST00000299840 SHROOM4Q9ULL8 1493 aa20.36■□□□□ 0.85
VWA3A-201ENST00000299840 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
VWA3A-201ENST00000299840 EIF4G1Q04637 1599 aaKnown RBP19.94■□□□□ 0.78
VWA3A-201ENST00000299840 CC2D2AQ9P2K1 1620 aa19.84■□□□□ 0.77
VWA3A-201ENST00000299840 CECR2Q9BXF3 1484 aa19.67■□□□□ 0.74
VWA3A-201ENST00000299840 SMARCA4P51532 1647 aa19.65■□□□□ 0.74
VWA3A-201ENST00000299840 BAZ1AQ9NRL2 1556 aaPredicted RBP19.63■□□□□ 0.73
VWA3A-201ENST00000299840 SMARCA2P51531 1590 aa19.51■□□□□ 0.71
VWA3A-201ENST00000299840 PEG3Q9GZU2 1588 aa19.51■□□□□ 0.71
VWA3A-201ENST00000299840 NCAPD3P42695 1498 aa19.51■□□□□ 0.71
VWA3A-201ENST00000299840 ATAD2BQ9ULI0 1458 aa19.5■□□□□ 0.71
VWA3A-201ENST00000299840 MROH2BQ7Z745 1585 aa19.49■□□□□ 0.71
VWA3A-201ENST00000299840 HMGXB3Q12766 1538 aa19.43■□□□□ 0.7
VWA3A-201ENST00000299840 BAZ1BQ9UIG0 1483 aaKnown RBP19.32■□□□□ 0.68
VWA3A-201ENST00000299840 WIZO95785 1651 aa19.3■□□□□ 0.68
VWA3A-201ENST00000299840 RSF1Q96T23 1441 aaPredicted RBP19.29■□□□□ 0.68
VWA3A-201ENST00000299840 TOP2AP11388 1531 aaKnown RBP19.12■□□□□ 0.65
VWA3A-201ENST00000299840 PELP1Q8IZL8 1130 aaKnown RBP19.08■□□□□ 0.65
VWA3A-201ENST00000299840 LAMC3Q9Y6N6 1575 aa19■□□□□ 0.63
VWA3A-201ENST00000299840 NESP48681 1621 aa18.94■□□□□ 0.62
VWA3A-201ENST00000299840 CADPSQ9ULU8 1353 aa18.9■□□□□ 0.62
VWA3A-201ENST00000299840 MYT1Q01538 1121 aa18.88■□□□□ 0.61
VWA3A-201ENST00000299840 CCDC88BA6NC98 1476 aa18.86■□□□□ 0.61
VWA3A-201ENST00000299840 CFTRP13569 1480 aa18.83■□□□□ 0.6
VWA3A-201ENST00000299840 ERCC6Q03468 1493 aa18.83■□□□□ 0.6
VWA3A-201ENST00000299840 PDS5BQ9NTI5 1447 aa18.82■□□□□ 0.6
VWA3A-201ENST00000299840 PRDM2Q13029 1718 aa18.8■□□□□ 0.6
VWA3A-201ENST00000299840 KIF21AQ7Z4S6 1674 aa18.8■□□□□ 0.6
VWA3A-201ENST00000299840 SUPT5HO00267 1087 aaKnown RBP18.73■□□□□ 0.59
VWA3A-201ENST00000299840 THOC2Q8NI27 1593 aaKnown RBP18.72■□□□□ 0.59
VWA3A-201ENST00000299840 CUX2O14529 1486 aa18.7■□□□□ 0.58
VWA3A-201ENST00000299840 FANCD2Q9BXW9 1451 aa18.68■□□□□ 0.58
VWA3A-201ENST00000299840 CEP164Q9UPV0 1460 aa18.65■□□□□ 0.58
VWA3A-201ENST00000299840 MRC2Q9UBG0 1479 aa18.63■□□□□ 0.57
VWA3A-201ENST00000299840 WDR62O43379 1518 aa18.59■□□□□ 0.57
VWA3A-201ENST00000299840 URB2Q14146 1524 aaKnown RBP18.5■□□□□ 0.55
VWA3A-201ENST00000299840 ABCC8Q09428 1581 aa18.46■□□□□ 0.55
VWA3A-201ENST00000299840 DNMBPQ6XZF7 1577 aa18.42■□□□□ 0.54
VWA3A-201ENST00000299840 TOPBP1Q92547 1522 aa18.41■□□□□ 0.54
VWA3A-201ENST00000299840 CUX1P39880 1505 aa18.29■□□□□ 0.52
VWA3A-201ENST00000299840 IFT140Q96RY7 1462 aa18.28■□□□□ 0.52
VWA3A-201ENST00000299840 POLA1P09884 1462 aaPredicted RBP18.24■□□□□ 0.51
VWA3A-201ENST00000299840 TARBP1Q13395 1621 aaKnown RBP18.24■□□□□ 0.51
VWA3A-201ENST00000299840 TTBK1Q5TCY1 1321 aaPredicted RBP18.22■□□□□ 0.51
VWA3A-201ENST00000299840 BIVM-ERCC5R4GMW8 1640 aa18.21■□□□□ 0.51
VWA3A-201ENST00000299840 FGD5Q6ZNL6 1462 aa18.2■□□□□ 0.5
VWA3A-201ENST00000299840 TOP2BQ02880 1626 aa18.18■□□□□ 0.5
VWA3A-201ENST00000299840 WRNQ14191 1432 aaPredicted RBP eCLIP18.17■□□□□ 0.5
VWA3A-201ENST00000299840 WDR97A6NE52 1622 aa18.16■□□□□ 0.5
VWA3A-201ENST00000299840 SOGA1O94964 1423 aa18.15■□□□□ 0.5
VWA3A-201ENST00000299840 SYNJ1O43426 1573 aa18.15■□□□□ 0.5
VWA3A-201ENST00000299840 ZNF608Q9ULD9 1512 aaPredicted RBP18.14■□□□□ 0.5
VWA3A-201ENST00000299840 RAD54L2Q9Y4B4 1467 aa18.13■□□□□ 0.49
VWA3A-201ENST00000299840 EIF4G3O43432 1585 aaKnown RBP18.12■□□□□ 0.49
VWA3A-201ENST00000299840 ABCA10Q8WWZ4 1543 aa18.06■□□□□ 0.48
VWA3A-201ENST00000299840 AQRO60306 1485 aaKnown RBP eCLIP18.04■□□□□ 0.48
VWA3A-201ENST00000299840 ABCA5Q8WWZ7 1642 aa18.01■□□□□ 0.47
VWA3A-201ENST00000299840 TDRD9Q8NDG6 1382 aaKnown RBP18■□□□□ 0.47
VWA3A-201ENST00000299840 DNAJC5Q9H3Z4 198 aa17.99■□□□□ 0.47
VWA3A-201ENST00000299840 PBRM1Q86U86 1689 aa17.98■□□□□ 0.47
VWA3A-201ENST00000299840 GRIN2BQ13224 1484 aa17.96■□□□□ 0.47
VWA3A-201ENST00000299840 GAPVD1Q14C86 1478 aa17.96■□□□□ 0.47
VWA3A-201ENST00000299840 MAGI1Q96QZ7 1491 aaPredicted RBP17.92■□□□□ 0.46
VWA3A-201ENST00000299840 CHD1O14646 1710 aa17.91■□□□□ 0.46
VWA3A-201ENST00000299840 SNAPC4Q5SXM2 1469 aa17.9■□□□□ 0.46
VWA3A-201ENST00000299840 OSCARQ8IYS5 282 aa17.87■□□□□ 0.45
VWA3A-201ENST00000299840 ERICH3Q5RHP9 1530 aa17.86■□□□□ 0.45
VWA3A-201ENST00000299840 SYNJ2O15056 1496 aa17.83■□□□□ 0.45
VWA3A-201ENST00000299840 PRKCSHP14314 528 aaPredicted RBP17.82■□□□□ 0.44
VWA3A-201ENST00000299840 ADAMTS12P58397 1594 aa17.81■□□□□ 0.44
VWA3A-201ENST00000299840 KIF27Q86VH2 1401 aa17.8■□□□□ 0.44
VWA3A-201ENST00000299840 FHAD1B1AJZ9 1412 aa17.76■□□□□ 0.43
VWA3A-201ENST00000299840 CHMP7Q8WUX9 453 aaPredicted RBP17.75■□□□□ 0.43
VWA3A-201ENST00000299840 FBLN2P98095 1184 aa17.74■□□□□ 0.43
VWA3A-201ENST00000299840 CUL7Q14999 1698 aa17.73■□□□□ 0.43
VWA3A-201ENST00000299840 TRIM41Q8WV44 630 aa17.73■□□□□ 0.43
VWA3A-201ENST00000299840 GRIN2AQ12879 1464 aa17.72■□□□□ 0.43
VWA3A-201ENST00000299840 CLASP1Q7Z460 1538 aa17.72■□□□□ 0.43
VWA3A-201ENST00000299840 IGF1RP08069 1367 aa17.72■□□□□ 0.43
VWA3A-201ENST00000299840 NUP160Q12769 1436 aa17.66■□□□□ 0.42
VWA3A-201ENST00000299840 CEP170Q5SW79 1584 aa17.64■□□□□ 0.41
VWA3A-201ENST00000299840 RUSC2Q8N2Y8 1516 aa17.63■□□□□ 0.41
VWA3A-201ENST00000299840 RIMBP3CA6NJZ7 1639 aa17.62■□□□□ 0.41
VWA3A-201ENST00000299840 RIMBP3BA6NNM3 1639 aa17.62■□□□□ 0.41
VWA3A-201ENST00000299840 RIMBP3Q9UFD9 1639 aa17.62■□□□□ 0.41
VWA3A-201ENST00000299840 CARMIL1Q5VZK9 1371 aa17.6■□□□□ 0.41
VWA3A-201ENST00000299840 ARHGEF11O15085 1522 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms