RNA–Protein interactions for RNA: ENST00000299202.4

TRMT61A-201, Transcript of tRNA methyltransferase 61A, humanhuman

TSL 1 (best)

Gene TRMT61A, Length 2,827 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT61A-201ENST00000299202 NISCHQ9Y2I1 1504 aa36.59■■■■□ 3.45
TRMT61A-201ENST00000299202 CCDC180Q9P1Z9 1646 aa31.42■■■□□ 2.62
TRMT61A-201ENST00000299202 ZCCHC6Q5VYS8 1495 aaKnown RBP30.79■■■□□ 2.52
TRMT61A-201ENST00000299202 SHROOM4Q9ULL8 1493 aa30.79■■■□□ 2.52
TRMT61A-201ENST00000299202 DCAF8L2P0C7V8 631 aa30.65■■■□□ 2.5
TRMT61A-201ENST00000299202 DCAF1Q9Y4B6 1507 aa29.92■■■□□ 2.38
TRMT61A-201ENST00000299202 ABCC9O60706 1549 aa29.91■■■□□ 2.38
TRMT61A-201ENST00000299202 SUPT5HO00267 1087 aaKnown RBP29.76■■■□□ 2.35
TRMT61A-201ENST00000299202 SCRIBQ14160 1630 aa29.47■■■□□ 2.31
TRMT61A-201ENST00000299202 MYO15BQ96JP2 1530 aa29.3■■■□□ 2.28
TRMT61A-201ENST00000299202 NACADO15069 1562 aa29.21■■■□□ 2.27
TRMT61A-201ENST00000299202 RB1CC1Q8TDY2 1594 aa28.93■■■□□ 2.22
TRMT61A-201ENST00000299202 CECR2Q9BXF3 1484 aa28.7■■■□□ 2.19
TRMT61A-201ENST00000299202 RSF1Q96T23 1441 aaPredicted RBP28.68■■■□□ 2.18
TRMT61A-201ENST00000299202 UNC13AQ9UPW8 1703 aa28.67■■■□□ 2.18
TRMT61A-201ENST00000299202 CHIC1Q5VXU3 224 aa28.51■■■□□ 2.15
TRMT61A-201ENST00000299202 MROH2BQ7Z745 1585 aa28.49■■■□□ 2.15
TRMT61A-201ENST00000299202 PABPN1Q86U42 306 aaKnown RBP eCLIP28.48■■■□□ 2.15
TRMT61A-201ENST00000299202 WIZO95785 1651 aa28.33■■■□□ 2.12
TRMT61A-201ENST00000299202 BICRAQ9NZM4 1560 aa28.29■■■□□ 2.12
TRMT61A-201ENST00000299202 BAZ1AQ9NRL2 1556 aaPredicted RBP28.11■■■□□ 2.09
TRMT61A-201ENST00000299202 SMARCA4P51532 1647 aa28.05■■■□□ 2.08
TRMT61A-201ENST00000299202 TOP2AP11388 1531 aaKnown RBP27.75■■■□□ 2.03
TRMT61A-201ENST00000299202 LOC105371045A0A1W2PR82 267 aa27.74■■■□□ 2.03
TRMT61A-201ENST00000299202 TRIM41Q8WV44 630 aa27.68■■■□□ 2.02
TRMT61A-201ENST00000299202 CCDC88BA6NC98 1476 aa27.67■■■□□ 2.02
TRMT61A-201ENST00000299202 SMARCA2P51531 1590 aa27.63■■■□□ 2.01
TRMT61A-201ENST00000299202 FAM9AQ8IZU1 332 aaPredicted RBP27.57■■■□□ 2
TRMT61A-201ENST00000299202 EIF4G1Q04637 1599 aaKnown RBP27.55■■■□□ 2
TRMT61A-201ENST00000299202 ATAD2BQ9ULI0 1458 aa27.5■■□□□ 1.99
TRMT61A-201ENST00000299202 PEG3Q9GZU2 1588 aa27.48■■□□□ 1.99
TRMT61A-201ENST00000299202 EHMT2Q96KQ7 1210 aa27.45■■□□□ 1.99
TRMT61A-201ENST00000299202 ABCC8Q09428 1581 aa27.43■■□□□ 1.98
TRMT61A-201ENST00000299202 BAZ1BQ9UIG0 1483 aaKnown RBP27.36■■□□□ 1.97
TRMT61A-201ENST00000299202 NCAPD3P42695 1498 aa27.05■■□□□ 1.92
TRMT61A-201ENST00000299202 SOGA1O94964 1423 aa26.98■■□□□ 1.91
TRMT61A-201ENST00000299202 HMGXB3Q12766 1538 aa26.97■■□□□ 1.91
TRMT61A-201ENST00000299202 RUSC2Q8N2Y8 1516 aa26.95■■□□□ 1.91
TRMT61A-201ENST00000299202 SYNJ1O43426 1573 aa26.92■■□□□ 1.9
TRMT61A-201ENST00000299202 WRNQ14191 1432 aaPredicted RBP eCLIP26.92■■□□□ 1.9
TRMT61A-201ENST00000299202 CC2D2AQ9P2K1 1620 aa26.91■■□□□ 1.9
TRMT61A-201ENST00000299202 PCGF6Q9BYE7 350 aa26.85■■□□□ 1.89
TRMT61A-201ENST00000299202 DNAJC5BQ9UF47 199 aa26.66■■□□□ 1.86
TRMT61A-201ENST00000299202 CFTRP13569 1480 aa26.64■■□□□ 1.86
TRMT61A-201ENST00000299202 CSRNP3Q8WYN3 585 aa26.64■■□□□ 1.86
TRMT61A-201ENST00000299202 PPARGC1BQ86YN6 1023 aaKnown RBP26.61■■□□□ 1.85
TRMT61A-201ENST00000299202 TOP2BQ02880 1626 aa26.57■■□□□ 1.84
TRMT61A-201ENST00000299202 CUX1P39880 1505 aa26.56■■□□□ 1.84
TRMT61A-201ENST00000299202 BIVM-ERCC5R4GMW8 1640 aa26.5■■□□□ 1.83
TRMT61A-201ENST00000299202 UBTFP17480 764 aaKnown RBP26.49■■□□□ 1.83
TRMT61A-201ENST00000299202 CADPSQ9ULU8 1353 aa26.49■■□□□ 1.83
TRMT61A-201ENST00000299202 NESP48681 1621 aa26.46■■□□□ 1.83
TRMT61A-201ENST00000299202 EEA1Q15075 1411 aa26.46■■□□□ 1.83
TRMT61A-201ENST00000299202 PRDM2Q13029 1718 aa26.41■■□□□ 1.82
TRMT61A-201ENST00000299202 CEP162Q5TB80 1403 aa26.4■■□□□ 1.82
TRMT61A-201ENST00000299202 TRIM26Q12899 539 aaPredicted RBP26.39■■□□□ 1.82
TRMT61A-201ENST00000299202 GOLGA3Q08378 1498 aa26.35■■□□□ 1.81
TRMT61A-201ENST00000299202 TNIKQ9UKE5 1360 aa26.35■■□□□ 1.81
TRMT61A-201ENST00000299202 RANGAP1P46060 587 aaPredicted RBP26.34■■□□□ 1.81
TRMT61A-201ENST00000299202 RAPGEF2Q9Y4G8 1499 aa26.33■■□□□ 1.81
TRMT61A-201ENST00000299202 TTBK1Q5TCY1 1321 aaPredicted RBP26.33■■□□□ 1.81
TRMT61A-201ENST00000299202 FANCD2Q9BXW9 1451 aa26.27■■□□□ 1.8
TRMT61A-201ENST00000299202 CEP164Q9UPV0 1460 aa26.27■■□□□ 1.8
TRMT61A-201ENST00000299202 KIF21BO75037 1637 aa26.26■■□□□ 1.79
TRMT61A-201ENST00000299202 HRCP23327 699 aa26.21■■□□□ 1.79
TRMT61A-201ENST00000299202 FGD5Q6ZNL6 1462 aa26.18■■□□□ 1.78
TRMT61A-201ENST00000299202 CUX2O14529 1486 aa26.12■■□□□ 1.77
TRMT61A-201ENST00000299202 KIF27Q86VH2 1401 aa26.12■■□□□ 1.77
TRMT61A-201ENST00000299202 PRXQ9BXM0 1461 aa26.09■■□□□ 1.77
TRMT61A-201ENST00000299202 RAD54L2Q9Y4B4 1467 aa26.08■■□□□ 1.76
TRMT61A-201ENST00000299202 CLIP1P30622 1438 aa26.05■■□□□ 1.76
TRMT61A-201ENST00000299202 TOPBP1Q92547 1522 aa26.03■■□□□ 1.76
TRMT61A-201ENST00000299202 LAMC3Q9Y6N6 1575 aa26.01■■□□□ 1.75
TRMT61A-201ENST00000299202 URB2Q14146 1524 aaKnown RBP25.99■■□□□ 1.75
TRMT61A-201ENST00000299202 DNMBPQ6XZF7 1577 aa25.98■■□□□ 1.75
TRMT61A-201ENST00000299202 KIF21AQ7Z4S6 1674 aa25.98■■□□□ 1.75
TRMT61A-201ENST00000299202 IGF1RP08069 1367 aa25.98■■□□□ 1.75
TRMT61A-201ENST00000299202 POLA1P09884 1462 aaPredicted RBP25.97■■□□□ 1.75
TRMT61A-201ENST00000299202 ERICH3Q5RHP9 1530 aa25.94■■□□□ 1.74
TRMT61A-201ENST00000299202 PDS5BQ9NTI5 1447 aa25.84■■□□□ 1.73
TRMT61A-201ENST00000299202 CARMIL1Q5VZK9 1371 aa25.83■■□□□ 1.73
TRMT61A-201ENST00000299202 VPS8Q8N3P4 1428 aa25.81■■□□□ 1.72
TRMT61A-201ENST00000299202 ARAP1Q96P48 1450 aa25.8■■□□□ 1.72
TRMT61A-201ENST00000299202 ABCA10Q8WWZ4 1543 aa25.79■■□□□ 1.72
TRMT61A-201ENST00000299202 TDRD9Q8NDG6 1382 aaKnown RBP25.79■■□□□ 1.72
TRMT61A-201ENST00000299202 WDR97A6NE52 1622 aa25.7■■□□□ 1.7
TRMT61A-201ENST00000299202 ARHGAP35Q9NRY4 1499 aa25.7■■□□□ 1.7
TRMT61A-201ENST00000299202 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.67■■□□□ 1.7
TRMT61A-201ENST00000299202 P3H3Q8IVL6 736 aa25.65■■□□□ 1.7
TRMT61A-201ENST00000299202 KANK4Q5T7N3 995 aaPredicted RBP25.61■■□□□ 1.69
TRMT61A-201ENST00000299202 APLP2Q06481 763 aa25.59■■□□□ 1.69
TRMT61A-201ENST00000299202 TARBP1Q13395 1621 aaKnown RBP25.58■■□□□ 1.69
TRMT61A-201ENST00000299202 ABCA5Q8WWZ7 1642 aa25.58■■□□□ 1.69
TRMT61A-201ENST00000299202 GAPVD1Q14C86 1478 aa25.57■■□□□ 1.68
TRMT61A-201ENST00000299202 MRC2Q9UBG0 1479 aa25.54■■□□□ 1.68
TRMT61A-201ENST00000299202 AQRO60306 1485 aaKnown RBP eCLIP25.54■■□□□ 1.68
TRMT61A-201ENST00000299202 HNRNPUL2Q1KMD3 747 aaKnown RBP25.5■■□□□ 1.67
TRMT61A-201ENST00000299202 CUL7Q14999 1698 aa25.49■■□□□ 1.67
TRMT61A-201ENST00000299202 PELP1Q8IZL8 1130 aaKnown RBP25.48■■□□□ 1.67
TRMT61A-201ENST00000299202 ZNF608Q9ULD9 1512 aaPredicted RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms