RNA–Protein interactions for RNA: ENST00000298282.13

PKNOX2-201, Transcript of PBX/knotted 1 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX2, Length 3,687 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-201ENST00000298282 NISCHQ9Y2I1 1504 aa23.03■■□□□ 1.28
PKNOX2-201ENST00000298282 CCDC180Q9P1Z9 1646 aa19.97■□□□□ 0.79
PKNOX2-201ENST00000298282 ZCCHC6Q5VYS8 1495 aaKnown RBP19.48■□□□□ 0.71
PKNOX2-201ENST00000298282 DCAF1Q9Y4B6 1507 aa19.17■□□□□ 0.66
PKNOX2-201ENST00000298282 SHROOM4Q9ULL8 1493 aa18.84■□□□□ 0.61
PKNOX2-201ENST00000298282 MYO15BQ96JP2 1530 aa18.77■□□□□ 0.6
PKNOX2-201ENST00000298282 DCAF8L2P0C7V8 631 aa18.45■□□□□ 0.54
PKNOX2-201ENST00000298282 NACADO15069 1562 aa18.41■□□□□ 0.54
PKNOX2-201ENST00000298282 ABCC9O60706 1549 aa18.34■□□□□ 0.53
PKNOX2-201ENST00000298282 SUPT5HO00267 1087 aaKnown RBP18.34■□□□□ 0.53
PKNOX2-201ENST00000298282 SCRIBQ14160 1630 aa18.24■□□□□ 0.51
PKNOX2-201ENST00000298282 RB1CC1Q8TDY2 1594 aa18.09■□□□□ 0.49
PKNOX2-201ENST00000298282 RSF1Q96T23 1441 aaPredicted RBP18.01■□□□□ 0.47
PKNOX2-201ENST00000298282 CHIC1Q5VXU3 224 aa17.97■□□□□ 0.47
PKNOX2-201ENST00000298282 UNC13AQ9UPW8 1703 aa17.88■□□□□ 0.45
PKNOX2-201ENST00000298282 HRCP23327 699 aa17.86■□□□□ 0.45
PKNOX2-201ENST00000298282 CECR2Q9BXF3 1484 aa17.79■□□□□ 0.44
PKNOX2-201ENST00000298282 MROH2BQ7Z745 1585 aa17.78■□□□□ 0.44
PKNOX2-201ENST00000298282 PPARGC1BQ86YN6 1023 aaKnown RBP17.78■□□□□ 0.44
PKNOX2-201ENST00000298282 BAZ1AQ9NRL2 1556 aaPredicted RBP17.74■□□□□ 0.43
PKNOX2-201ENST00000298282 WIZO95785 1651 aa17.68■□□□□ 0.42
PKNOX2-201ENST00000298282 SMARCA4P51532 1647 aa17.62■□□□□ 0.41
PKNOX2-201ENST00000298282 BICRAQ9NZM4 1560 aa17.61■□□□□ 0.41
PKNOX2-201ENST00000298282 EIF4G1Q04637 1599 aaKnown RBP17.56■□□□□ 0.4
PKNOX2-201ENST00000298282 TOP2AP11388 1531 aaKnown RBP17.53■□□□□ 0.4
PKNOX2-201ENST00000298282 PEG3Q9GZU2 1588 aa17.48■□□□□ 0.39
PKNOX2-201ENST00000298282 PELP1Q8IZL8 1130 aaKnown RBP17.39■□□□□ 0.37
PKNOX2-201ENST00000298282 SMARCA2P51531 1590 aa17.39■□□□□ 0.37
PKNOX2-201ENST00000298282 PCGF6Q9BYE7 350 aa17.39■□□□□ 0.37
PKNOX2-201ENST00000298282 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
PKNOX2-201ENST00000298282 SCAF1Q9H7N4 1312 aaKnown RBP17.29■□□□□ 0.36
PKNOX2-201ENST00000298282 TRIM41Q8WV44 630 aa17.27■□□□□ 0.36
PKNOX2-201ENST00000298282 LOC105371045A0A1W2PR82 267 aa17.21■□□□□ 0.35
PKNOX2-201ENST00000298282 ATAD2BQ9ULI0 1458 aa17.16■□□□□ 0.34
PKNOX2-201ENST00000298282 PABPN1Q86U42 306 aaKnown RBP eCLIP17.14■□□□□ 0.33
PKNOX2-201ENST00000298282 ABCC8Q09428 1581 aa17.06■□□□□ 0.32
PKNOX2-201ENST00000298282 BAZ1BQ9UIG0 1483 aaKnown RBP17.03■□□□□ 0.32
PKNOX2-201ENST00000298282 HMGXB3Q12766 1538 aa17.03■□□□□ 0.32
PKNOX2-201ENST00000298282 EEA1Q15075 1411 aa16.98■□□□□ 0.31
PKNOX2-201ENST00000298282 NCAPD3P42695 1498 aa16.97■□□□□ 0.31
PKNOX2-201ENST00000298282 WRNQ14191 1432 aaPredicted RBP eCLIP16.89■□□□□ 0.29
PKNOX2-201ENST00000298282 TRIM26Q12899 539 aaPredicted RBP16.89■□□□□ 0.29
PKNOX2-201ENST00000298282 SYNJ1O43426 1573 aa16.88■□□□□ 0.29
PKNOX2-201ENST00000298282 FAM9AQ8IZU1 332 aaPredicted RBP16.85■□□□□ 0.29
PKNOX2-201ENST00000298282 BIVM-ERCC5R4GMW8 1640 aa16.84■□□□□ 0.29
PKNOX2-201ENST00000298282 SOGA1O94964 1423 aa16.82■□□□□ 0.28
PKNOX2-201ENST00000298282 TOP2BQ02880 1626 aa16.81■□□□□ 0.28
PKNOX2-201ENST00000298282 PRDM2Q13029 1718 aa16.81■□□□□ 0.28
PKNOX2-201ENST00000298282 KIF21BO75037 1637 aa16.79■□□□□ 0.28
PKNOX2-201ENST00000298282 TNIKQ9UKE5 1360 aa16.77■□□□□ 0.28
PKNOX2-201ENST00000298282 RUSC2Q8N2Y8 1516 aa16.75■□□□□ 0.27
PKNOX2-201ENST00000298282 CFTRP13569 1480 aa16.72■□□□□ 0.27
PKNOX2-201ENST00000298282 CSRNP3Q8WYN3 585 aa16.71■□□□□ 0.27
PKNOX2-201ENST00000298282 GOLGA3Q08378 1498 aa16.71■□□□□ 0.27
PKNOX2-201ENST00000298282 CEP164Q9UPV0 1460 aa16.67■□□□□ 0.26
PKNOX2-201ENST00000298282 CEP162Q5TB80 1403 aa16.67■□□□□ 0.26
PKNOX2-201ENST00000298282 MYT1Q01538 1121 aa16.66■□□□□ 0.26
PKNOX2-201ENST00000298282 NEUROD1Q13562 356 aa16.64■□□□□ 0.25
PKNOX2-201ENST00000298282 CUX1P39880 1505 aa16.61■□□□□ 0.25
PKNOX2-201ENST00000298282 CC2D2AQ9P2K1 1620 aa16.58■□□□□ 0.24
PKNOX2-201ENST00000298282 ERICH3Q5RHP9 1530 aa16.58■□□□□ 0.24
PKNOX2-201ENST00000298282 ACIN1Q9UKV3 1341 aaKnown RBP16.54■□□□□ 0.24
PKNOX2-201ENST00000298282 PRXQ9BXM0 1461 aa16.52■□□□□ 0.23
PKNOX2-201ENST00000298282 GTF3C3Q9Y5Q9 886 aa16.5■□□□□ 0.23
PKNOX2-201ENST00000298282 EHMT2Q96KQ7 1210 aa16.49■□□□□ 0.23
PKNOX2-201ENST00000298282 CADPSQ9ULU8 1353 aa16.49■□□□□ 0.23
PKNOX2-201ENST00000298282 RAPGEF2Q9Y4G8 1499 aa16.48■□□□□ 0.23
PKNOX2-201ENST00000298282 ZEB1P37275 1124 aaPredicted RBP16.48■□□□□ 0.23
PKNOX2-201ENST00000298282 KIF27Q86VH2 1401 aa16.41■□□□□ 0.22
PKNOX2-201ENST00000298282 CLIP1P30622 1438 aa16.41■□□□□ 0.22
PKNOX2-201ENST00000298282 UBTFP17480 764 aaKnown RBP16.41■□□□□ 0.22
PKNOX2-201ENST00000298282 VPS8Q8N3P4 1428 aa16.39■□□□□ 0.21
PKNOX2-201ENST00000298282 DNMBPQ6XZF7 1577 aa16.32■□□□□ 0.2
PKNOX2-201ENST00000298282 LAMC3Q9Y6N6 1575 aa16.32■□□□□ 0.2
PKNOX2-201ENST00000298282 FANCD2Q9BXW9 1451 aa16.3■□□□□ 0.2
PKNOX2-201ENST00000298282 FGD5Q6ZNL6 1462 aa16.3■□□□□ 0.2
PKNOX2-201ENST00000298282 ARAP1Q96P48 1450 aa16.28■□□□□ 0.2
PKNOX2-201ENST00000298282 WDR97A6NE52 1622 aa16.25■□□□□ 0.19
PKNOX2-201ENST00000298282 IGF1RP08069 1367 aa16.24■□□□□ 0.19
PKNOX2-201ENST00000298282 ABCA10Q8WWZ4 1543 aa16.23■□□□□ 0.19
PKNOX2-201ENST00000298282 CUX2O14529 1486 aa16.23■□□□□ 0.19
PKNOX2-201ENST00000298282 TOPBP1Q92547 1522 aa16.22■□□□□ 0.19
PKNOX2-201ENST00000298282 CUL7Q14999 1698 aa16.18■□□□□ 0.18
PKNOX2-201ENST00000298282 ARHGAP35Q9NRY4 1499 aa16.17■□□□□ 0.18
PKNOX2-201ENST00000298282 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
PKNOX2-201ENST00000298282 NESP48681 1621 aa16.16■□□□□ 0.18
PKNOX2-201ENST00000298282 MAP3K1Q13233 1512 aa16.15■□□□□ 0.18
PKNOX2-201ENST00000298282 CARMIL1Q5VZK9 1371 aa16.12■□□□□ 0.17
PKNOX2-201ENST00000298282 URB2Q14146 1524 aaKnown RBP16.12■□□□□ 0.17
PKNOX2-201ENST00000298282 ABCA5Q8WWZ7 1642 aa16.11■□□□□ 0.17
PKNOX2-201ENST00000298282 BCL11AQ9H165 835 aa16.1■□□□□ 0.17
PKNOX2-201ENST00000298282 CTTNBP2Q8WZ74 1663 aa16.08■□□□□ 0.17
PKNOX2-201ENST00000298282 KIF21AQ7Z4S6 1674 aa16.08■□□□□ 0.16
PKNOX2-201ENST00000298282 PDS5BQ9NTI5 1447 aa16.07■□□□□ 0.16
PKNOX2-201ENST00000298282 RAD54L2Q9Y4B4 1467 aa16.06■□□□□ 0.16
PKNOX2-201ENST00000298282 EFCAB5A4FU69 1503 aa16.04■□□□□ 0.16
PKNOX2-201ENST00000298282 RRBP1Q9P2E9 1410 aaKnown RBP16.04■□□□□ 0.16
PKNOX2-201ENST00000298282 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.04■□□□□ 0.16
PKNOX2-201ENST00000298282 DIEXFQ68CQ4 756 aaKnown RBP16.04■□□□□ 0.16
PKNOX2-201ENST00000298282 CFAP43Q8NDM7 1665 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms