RNA–Protein interactions for RNA: ENST00000288839.6

SSX2B-201, Transcript of SSX family member 2B, humanhuman

TSL 3

Gene SSX2B, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2B-201ENST00000288839 AEBP2Q6ZN18 517 aaPredicted RBP18.17■□□□□ 0.5
SSX2B-201ENST00000288839 CHIC1Q5VXU3 224 aa17.31■□□□□ 0.36
SSX2B-201ENST00000288839 NISCHQ9Y2I1 1504 aa16.49■□□□□ 0.23
SSX2B-201ENST00000288839 SENP3Q9H4L4 574 aaPredicted RBP15.54■□□□□ 0.08
SSX2B-201ENST00000288839 PHF23Q9BUL5 403 aaPredicted RBP15.29■□□□□ 0.04
SSX2B-201ENST00000288839 CCDC180Q9P1Z9 1646 aa14.72□□□□□ -0.05
SSX2B-201ENST00000288839 ABCC9O60706 1549 aa14.65□□□□□ -0.06
SSX2B-201ENST00000288839 FOXD1Q16676 465 aa14.52□□□□□ -0.09
SSX2B-201ENST00000288839 RB1CC1Q8TDY2 1594 aa13.92□□□□□ -0.18
SSX2B-201ENST00000288839 PLPPR3Q6T4P5 718 aa13.91□□□□□ -0.18
SSX2B-201ENST00000288839 POTEDQ86YR6 584 aa13.85□□□□□ -0.19
SSX2B-201ENST00000288839 NACADO15069 1562 aa13.83□□□□□ -0.19
SSX2B-201ENST00000288839 DCAF8L2P0C7V8 631 aa13.82□□□□□ -0.2
SSX2B-201ENST00000288839 ZCCHC6Q5VYS8 1495 aaKnown RBP13.74□□□□□ -0.21
SSX2B-201ENST00000288839 UNC13AQ9UPW8 1703 aa13.7□□□□□ -0.22
SSX2B-201ENST00000288839 MSH5O43196 834 aa13.7□□□□□ -0.22
SSX2B-201ENST00000288839 MYO15BQ96JP2 1530 aa13.65□□□□□ -0.22
SSX2B-201ENST00000288839 PABPN1Q86U42 306 aaKnown RBP eCLIP13.63□□□□□ -0.23
SSX2B-201ENST00000288839 BICRAQ9NZM4 1560 aa13.59□□□□□ -0.23
SSX2B-201ENST00000288839 DNAJC5BQ9UF47 199 aa13.58□□□□□ -0.24
SSX2B-201ENST00000288839 PPP6R1Q9UPN7 881 aa13.57□□□□□ -0.24
SSX2B-201ENST00000288839 DCAF1Q9Y4B6 1507 aa13.56□□□□□ -0.24
SSX2B-201ENST00000288839 ADRA2BP18089 450 aa13.54□□□□□ -0.24
SSX2B-201ENST00000288839 SCRIBQ14160 1630 aa13.53□□□□□ -0.24
SSX2B-201ENST00000288839 PIAS4Q8N2W9 510 aaPredicted RBP13.48□□□□□ -0.25
SSX2B-201ENST00000288839 SHROOM4Q9ULL8 1493 aa13.28□□□□□ -0.28
SSX2B-201ENST00000288839 EIF4G1Q04637 1599 aaKnown RBP13.22□□□□□ -0.29
SSX2B-201ENST00000288839 CC2D2AQ9P2K1 1620 aa13.21□□□□□ -0.29
SSX2B-201ENST00000288839 CECR2Q9BXF3 1484 aa13.13□□□□□ -0.31
SSX2B-201ENST00000288839 SMARCA4P51532 1647 aa12.87□□□□□ -0.35
SSX2B-201ENST00000288839 ATAD2BQ9ULI0 1458 aa12.81□□□□□ -0.36
SSX2B-201ENST00000288839 NCAPD3P42695 1498 aa12.77□□□□□ -0.37
SSX2B-201ENST00000288839 MROH2BQ7Z745 1585 aa12.77□□□□□ -0.37
SSX2B-201ENST00000288839 BAZ1AQ9NRL2 1556 aaPredicted RBP12.77□□□□□ -0.37
SSX2B-201ENST00000288839 SMARCA2P51531 1590 aa12.73□□□□□ -0.37
SSX2B-201ENST00000288839 HMGXB3Q12766 1538 aa12.73□□□□□ -0.37
SSX2B-201ENST00000288839 PEG3Q9GZU2 1588 aa12.69□□□□□ -0.38
SSX2B-201ENST00000288839 BAZ1BQ9UIG0 1483 aaKnown RBP12.69□□□□□ -0.38
SSX2B-201ENST00000288839 NESP48681 1621 aa12.66□□□□□ -0.38
SSX2B-201ENST00000288839 WIZO95785 1651 aa12.64□□□□□ -0.39
SSX2B-201ENST00000288839 ERCC6Q03468 1493 aa12.58□□□□□ -0.4
SSX2B-201ENST00000288839 RSF1Q96T23 1441 aaPredicted RBP12.57□□□□□ -0.4
SSX2B-201ENST00000288839 KIF21AQ7Z4S6 1674 aa12.49□□□□□ -0.41
SSX2B-201ENST00000288839 THOC2Q8NI27 1593 aaKnown RBP12.48□□□□□ -0.41
SSX2B-201ENST00000288839 LAMC3Q9Y6N6 1575 aa12.47□□□□□ -0.41
SSX2B-201ENST00000288839 CUX2O14529 1486 aa12.45□□□□□ -0.42
SSX2B-201ENST00000288839 TOP2AP11388 1531 aaKnown RBP12.44□□□□□ -0.42
SSX2B-201ENST00000288839 CADPSQ9ULU8 1353 aa12.39□□□□□ -0.43
SSX2B-201ENST00000288839 MAPK8IP2Q13387 824 aaPredicted RBP12.38□□□□□ -0.43
SSX2B-201ENST00000288839 SUPT5HO00267 1087 aaKnown RBP12.36□□□□□ -0.43
SSX2B-201ENST00000288839 PDS5BQ9NTI5 1447 aa12.36□□□□□ -0.43
SSX2B-201ENST00000288839 MRC2Q9UBG0 1479 aa12.32□□□□□ -0.44
SSX2B-201ENST00000288839 CFTRP13569 1480 aa12.31□□□□□ -0.44
SSX2B-201ENST00000288839 FANCD2Q9BXW9 1451 aa12.3□□□□□ -0.44
SSX2B-201ENST00000288839 WDR62O43379 1518 aa12.3□□□□□ -0.44
SSX2B-201ENST00000288839 CCDC88BA6NC98 1476 aa12.29□□□□□ -0.44
SSX2B-201ENST00000288839 CEP164Q9UPV0 1460 aa12.29□□□□□ -0.44
SSX2B-201ENST00000288839 PPP4R3CPQ6ZMV5 832 aa12.29□□□□□ -0.44
SSX2B-201ENST00000288839 DMRT2Q9Y5R5 561 aa12.29□□□□□ -0.44
SSX2B-201ENST00000288839 PRDM2Q13029 1718 aa12.24□□□□□ -0.45
SSX2B-201ENST00000288839 URB2Q14146 1524 aaKnown RBP12.23□□□□□ -0.45
SSX2B-201ENST00000288839 DNAJC5Q9H3Z4 198 aa12.23□□□□□ -0.45
SSX2B-201ENST00000288839 SCAF1Q9H7N4 1312 aaKnown RBP12.21□□□□□ -0.45
SSX2B-201ENST00000288839 TOPBP1Q92547 1522 aa12.1□□□□□ -0.47
SSX2B-201ENST00000288839 ZNF608Q9ULD9 1512 aaPredicted RBP12.08□□□□□ -0.48
SSX2B-201ENST00000288839 DNMBPQ6XZF7 1577 aa12.07□□□□□ -0.48
SSX2B-201ENST00000288839 EIF4G3O43432 1585 aaKnown RBP12.03□□□□□ -0.48
SSX2B-201ENST00000288839 IFT140Q96RY7 1462 aa12.01□□□□□ -0.49
SSX2B-201ENST00000288839 POLA1P09884 1462 aaPredicted RBP12□□□□□ -0.49
SSX2B-201ENST00000288839 TARBP1Q13395 1621 aaKnown RBP12□□□□□ -0.49
SSX2B-201ENST00000288839 CUX1P39880 1505 aa11.98□□□□□ -0.49
SSX2B-201ENST00000288839 RAD54L2Q9Y4B4 1467 aa11.98□□□□□ -0.49
SSX2B-201ENST00000288839 FGD5Q6ZNL6 1462 aa11.95□□□□□ -0.5
SSX2B-201ENST00000288839 AQRO60306 1485 aaKnown RBP eCLIP11.95□□□□□ -0.5
SSX2B-201ENST00000288839 ABCC8Q09428 1581 aa11.94□□□□□ -0.5
SSX2B-201ENST00000288839 CNKSR2Q8WXI2 1034 aa11.94□□□□□ -0.5
SSX2B-201ENST00000288839 CHD1O14646 1710 aa11.9□□□□□ -0.5
SSX2B-201ENST00000288839 WDR97A6NE52 1622 aa11.89□□□□□ -0.51
SSX2B-201ENST00000288839 TDRD9Q8NDG6 1382 aaKnown RBP11.89□□□□□ -0.51
SSX2B-201ENST00000288839 CACNB1Q02641 598 aaPredicted RBP11.88□□□□□ -0.51
SSX2B-201ENST00000288839 SOGA1O94964 1423 aa11.87□□□□□ -0.51
SSX2B-201ENST00000288839 SYNJ1O43426 1573 aa11.87□□□□□ -0.51
SSX2B-201ENST00000288839 TRIM41Q8WV44 630 aa11.86□□□□□ -0.51
SSX2B-201ENST00000288839 SNAPC4Q5SXM2 1469 aa11.85□□□□□ -0.51
SSX2B-201ENST00000288839 OSCARQ8IYS5 282 aa11.84□□□□□ -0.51
SSX2B-201ENST00000288839 WRNQ14191 1432 aaPredicted RBP eCLIP11.84□□□□□ -0.51
SSX2B-201ENST00000288839 RIMBP3CA6NJZ7 1639 aa11.83□□□□□ -0.52
SSX2B-201ENST00000288839 RIMBP3BA6NNM3 1639 aa11.83□□□□□ -0.52
SSX2B-201ENST00000288839 RIMBP3Q9UFD9 1639 aa11.83□□□□□ -0.52
SSX2B-201ENST00000288839 PBRM1Q86U86 1689 aa11.82□□□□□ -0.52
SSX2B-201ENST00000288839 ABCA5Q8WWZ7 1642 aa11.81□□□□□ -0.52
SSX2B-201ENST00000288839 BIVM-ERCC5R4GMW8 1640 aa11.8□□□□□ -0.52
SSX2B-201ENST00000288839 NCBP3Q53F19 620 aaKnown RBP11.8□□□□□ -0.52
SSX2B-201ENST00000288839 ARHGEF11O15085 1522 aa11.8□□□□□ -0.52
SSX2B-201ENST00000288839 TOP2BQ02880 1626 aa11.79□□□□□ -0.52
SSX2B-201ENST00000288839 KCNA4P22459 653 aa11.79□□□□□ -0.52
SSX2B-201ENST00000288839 FBLN2P98095 1184 aa11.79□□□□□ -0.52
SSX2B-201ENST00000288839 ABCA10Q8WWZ4 1543 aa11.78□□□□□ -0.52
SSX2B-201ENST00000288839 HOXD11P31277 338 aaPredicted RBP11.78□□□□□ -0.52
SSX2B-201ENST00000288839 GRIN2BQ13224 1484 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms