RNA–Protein interactions for RNA: ENST00000265732.9

RBM48-201, Transcript of RNA binding motif protein 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM48, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48-201ENST00000265732 NISCHQ9Y2I1 1504 aa23.37■■□□□ 1.33
RBM48-201ENST00000265732 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
RBM48-201ENST00000265732 ABCC9O60706 1549 aa20.12■□□□□ 0.81
RBM48-201ENST00000265732 DCAF8L2P0C7V8 631 aa19.59■□□□□ 0.73
RBM48-201ENST00000265732 ZCCHC6Q5VYS8 1495 aaKnown RBP19.49■□□□□ 0.71
RBM48-201ENST00000265732 NACADO15069 1562 aa19.42■□□□□ 0.7
RBM48-201ENST00000265732 RB1CC1Q8TDY2 1594 aa19.42■□□□□ 0.7
RBM48-201ENST00000265732 MYO15BQ96JP2 1530 aa19.32■□□□□ 0.68
RBM48-201ENST00000265732 DCAF1Q9Y4B6 1507 aa19.31■□□□□ 0.68
RBM48-201ENST00000265732 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
RBM48-201ENST00000265732 SCRIBQ14160 1630 aa18.95■□□□□ 0.62
RBM48-201ENST00000265732 PABPN1Q86U42 306 aaKnown RBP eCLIP18.85■□□□□ 0.61
RBM48-201ENST00000265732 BICRAQ9NZM4 1560 aa18.79■□□□□ 0.6
RBM48-201ENST00000265732 SHROOM4Q9ULL8 1493 aa18.66■□□□□ 0.58
RBM48-201ENST00000265732 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
RBM48-201ENST00000265732 DNAJC5BQ9UF47 199 aa18.26■□□□□ 0.51
RBM48-201ENST00000265732 CC2D2AQ9P2K1 1620 aa18.2■□□□□ 0.5
RBM48-201ENST00000265732 CECR2Q9BXF3 1484 aa18.2■□□□□ 0.5
RBM48-201ENST00000265732 BAZ1AQ9NRL2 1556 aaPredicted RBP18.12■□□□□ 0.49
RBM48-201ENST00000265732 SMARCA4P51532 1647 aa18.12■□□□□ 0.49
RBM48-201ENST00000265732 MROH2BQ7Z745 1585 aa18.02■□□□□ 0.48
RBM48-201ENST00000265732 SMARCA2P51531 1590 aa17.96■□□□□ 0.47
RBM48-201ENST00000265732 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
RBM48-201ENST00000265732 NCAPD3P42695 1498 aa17.9■□□□□ 0.46
RBM48-201ENST00000265732 PEG3Q9GZU2 1588 aa17.89■□□□□ 0.45
RBM48-201ENST00000265732 WIZO95785 1651 aa17.88■□□□□ 0.45
RBM48-201ENST00000265732 RSF1Q96T23 1441 aaPredicted RBP17.87■□□□□ 0.45
RBM48-201ENST00000265732 BAZ1BQ9UIG0 1483 aaKnown RBP17.84■□□□□ 0.45
RBM48-201ENST00000265732 HMGXB3Q12766 1538 aa17.83■□□□□ 0.45
RBM48-201ENST00000265732 AEBP2Q6ZN18 517 aaPredicted RBP17.81■□□□□ 0.44
RBM48-201ENST00000265732 SUPT5HO00267 1087 aaKnown RBP17.67■□□□□ 0.42
RBM48-201ENST00000265732 TOP2AP11388 1531 aaKnown RBP17.66■□□□□ 0.42
RBM48-201ENST00000265732 POTEDQ86YR6 584 aa17.48■□□□□ 0.39
RBM48-201ENST00000265732 NESP48681 1621 aa17.46■□□□□ 0.38
RBM48-201ENST00000265732 CCDC88BA6NC98 1476 aa17.46■□□□□ 0.38
RBM48-201ENST00000265732 LAMC3Q9Y6N6 1575 aa17.43■□□□□ 0.38
RBM48-201ENST00000265732 CADPSQ9ULU8 1353 aa17.41■□□□□ 0.38
RBM48-201ENST00000265732 ERCC6Q03468 1493 aa17.35■□□□□ 0.37
RBM48-201ENST00000265732 CFTRP13569 1480 aa17.33■□□□□ 0.36
RBM48-201ENST00000265732 PDS5BQ9NTI5 1447 aa17.31■□□□□ 0.36
RBM48-201ENST00000265732 PRDM2Q13029 1718 aa17.3■□□□□ 0.36
RBM48-201ENST00000265732 KIF21AQ7Z4S6 1674 aa17.29■□□□□ 0.36
RBM48-201ENST00000265732 FANCD2Q9BXW9 1451 aa17.22■□□□□ 0.35
RBM48-201ENST00000265732 CEP164Q9UPV0 1460 aa17.19■□□□□ 0.34
RBM48-201ENST00000265732 THOC2Q8NI27 1593 aaKnown RBP17.12■□□□□ 0.33
RBM48-201ENST00000265732 MRC2Q9UBG0 1479 aa17.1■□□□□ 0.33
RBM48-201ENST00000265732 CUX2O14529 1486 aa17.03■□□□□ 0.32
RBM48-201ENST00000265732 WDR62O43379 1518 aa17.03■□□□□ 0.32
RBM48-201ENST00000265732 URB2Q14146 1524 aaKnown RBP17.02■□□□□ 0.31
RBM48-201ENST00000265732 ABCC8Q09428 1581 aa16.98■□□□□ 0.31
RBM48-201ENST00000265732 DNMBPQ6XZF7 1577 aa16.96■□□□□ 0.31
RBM48-201ENST00000265732 TOPBP1Q92547 1522 aa16.96■□□□□ 0.31
RBM48-201ENST00000265732 CUX1P39880 1505 aa16.9■□□□□ 0.3
RBM48-201ENST00000265732 WRNQ14191 1432 aaPredicted RBP eCLIP16.87■□□□□ 0.29
RBM48-201ENST00000265732 POLA1P09884 1462 aaPredicted RBP16.83■□□□□ 0.28
RBM48-201ENST00000265732 FGD5Q6ZNL6 1462 aa16.82■□□□□ 0.28
RBM48-201ENST00000265732 SYNJ1O43426 1573 aa16.82■□□□□ 0.28
RBM48-201ENST00000265732 TOP2BQ02880 1626 aa16.81■□□□□ 0.28
RBM48-201ENST00000265732 BIVM-ERCC5R4GMW8 1640 aa16.81■□□□□ 0.28
RBM48-201ENST00000265732 IFT140Q96RY7 1462 aa16.8■□□□□ 0.28
RBM48-201ENST00000265732 CHIC1Q5VXU3 224 aa16.78■□□□□ 0.28
RBM48-201ENST00000265732 SOGA1O94964 1423 aa16.78■□□□□ 0.28
RBM48-201ENST00000265732 RAD54L2Q9Y4B4 1467 aa16.77■□□□□ 0.27
RBM48-201ENST00000265732 TARBP1Q13395 1621 aaKnown RBP16.75■□□□□ 0.27
RBM48-201ENST00000265732 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
RBM48-201ENST00000265732 EIF4G3O43432 1585 aaKnown RBP16.68■□□□□ 0.26
RBM48-201ENST00000265732 AQRO60306 1485 aaKnown RBP eCLIP16.67■□□□□ 0.263e-7■■■□□ 18.4
RBM48-201ENST00000265732 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
RBM48-201ENST00000265732 WDR97A6NE52 1622 aa16.67■□□□□ 0.26
RBM48-201ENST00000265732 TRIM41Q8WV44 630 aa16.66■□□□□ 0.26
RBM48-201ENST00000265732 ABCA10Q8WWZ4 1543 aa16.65■□□□□ 0.26
RBM48-201ENST00000265732 GAPVD1Q14C86 1478 aa16.59■□□□□ 0.25
RBM48-201ENST00000265732 PBRM1Q86U86 1689 aa16.57■□□□□ 0.24
RBM48-201ENST00000265732 ABCA5Q8WWZ7 1642 aa16.57■□□□□ 0.24
RBM48-201ENST00000265732 GRIN2BQ13224 1484 aa16.55■□□□□ 0.24
RBM48-201ENST00000265732 KIF27Q86VH2 1401 aa16.51■□□□□ 0.23
RBM48-201ENST00000265732 FBLN2P98095 1184 aa16.5■□□□□ 0.23
RBM48-201ENST00000265732 SNAPC4Q5SXM2 1469 aa16.5■□□□□ 0.23
RBM48-201ENST00000265732 MAGI1Q96QZ7 1491 aaPredicted RBP16.48■□□□□ 0.23
RBM48-201ENST00000265732 CHD1O14646 1710 aa16.47■□□□□ 0.23
RBM48-201ENST00000265732 ERICH3Q5RHP9 1530 aa16.46■□□□□ 0.23
RBM48-201ENST00000265732 CHMP7Q8WUX9 453 aaPredicted RBP16.45■□□□□ 0.22
RBM48-201ENST00000265732 SYNJ2O15056 1496 aa16.42■□□□□ 0.22
RBM48-201ENST00000265732 OSCARQ8IYS5 282 aa16.42■□□□□ 0.22
RBM48-201ENST00000265732 RUSC2Q8N2Y8 1516 aa16.41■□□□□ 0.22
RBM48-201ENST00000265732 ADAMTS12P58397 1594 aa16.4■□□□□ 0.22
RBM48-201ENST00000265732 IGF1RP08069 1367 aa16.39■□□□□ 0.21
RBM48-201ENST00000265732 FHAD1B1AJZ9 1412 aa16.38■□□□□ 0.21
RBM48-201ENST00000265732 CUL7Q14999 1698 aa16.38■□□□□ 0.21
RBM48-201ENST00000265732 GRIN2AQ12879 1464 aa16.34■□□□□ 0.21
RBM48-201ENST00000265732 FAM9AQ8IZU1 332 aaPredicted RBP16.33■□□□□ 0.21
RBM48-201ENST00000265732 CARMIL1Q5VZK9 1371 aa16.33■□□□□ 0.2
RBM48-201ENST00000265732 DNAJC5Q9H3Z4 198 aa16.31■□□□□ 0.2
RBM48-201ENST00000265732 EEA1Q15075 1411 aa16.3■□□□□ 0.2
RBM48-201ENST00000265732 CSRNP3Q8WYN3 585 aa16.28■□□□□ 0.2
RBM48-201ENST00000265732 RAPGEF2Q9Y4G8 1499 aa16.25■□□□□ 0.19
RBM48-201ENST00000265732 CEP170Q5SW79 1584 aa16.25■□□□□ 0.19
RBM48-201ENST00000265732 NUP160Q12769 1436 aa16.22■□□□□ 0.19
RBM48-201ENST00000265732 CLASP1Q7Z460 1538 aa16.22■□□□□ 0.19
RBM48-201ENST00000265732 PRXQ9BXM0 1461 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms