RNA–Protein interactions for RNA: ENST00000262193.6

PSMB1-201, Transcript of proteasome subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB1-201ENST00000262193 NISCHQ9Y2I1 1504 aa26.59■■□□□ 1.85
PSMB1-201ENST00000262193 CCDC180Q9P1Z9 1646 aa23.59■■□□□ 1.37
PSMB1-201ENST00000262193 ABCC9O60706 1549 aa22.92■■□□□ 1.26
PSMB1-201ENST00000262193 ZCCHC6Q5VYS8 1495 aaKnown RBP22.2■■□□□ 1.14
PSMB1-201ENST00000262193 DCAF8L2P0C7V8 631 aa22.13■■□□□ 1.13
PSMB1-201ENST00000262193 NACADO15069 1562 aa22.12■■□□□ 1.13
PSMB1-201ENST00000262193 RB1CC1Q8TDY2 1594 aa22.11■■□□□ 1.13
PSMB1-201ENST00000262193 MYO15BQ96JP2 1530 aa22.04■■□□□ 1.12
PSMB1-201ENST00000262193 DCAF1Q9Y4B6 1507 aa22.01■■□□□ 1.11
PSMB1-201ENST00000262193 UNC13AQ9UPW8 1703 aa21.62■■□□□ 1.05
PSMB1-201ENST00000262193 SCRIBQ14160 1630 aa21.55■■□□□ 1.04
PSMB1-201ENST00000262193 BICRAQ9NZM4 1560 aa21.44■■□□□ 1.02
PSMB1-201ENST00000262193 PABPN1Q86U42 306 aaKnown RBP eCLIP21.42■■□□□ 1.02
PSMB1-201ENST00000262193 SHROOM4Q9ULL8 1493 aa21.23■□□□□ 0.99
PSMB1-201ENST00000262193 EIF4G1Q04637 1599 aaKnown RBP20.86■□□□□ 0.93
PSMB1-201ENST00000262193 DNAJC5BQ9UF47 199 aa20.84■□□□□ 0.93
PSMB1-201ENST00000262193 CC2D2AQ9P2K1 1620 aa20.73■□□□□ 0.91
PSMB1-201ENST00000262193 CECR2Q9BXF3 1484 aa20.7■□□□□ 0.9
PSMB1-201ENST00000262193 SMARCA4P51532 1647 aa20.61■□□□□ 0.89
PSMB1-201ENST00000262193 BAZ1AQ9NRL2 1556 aaPredicted RBP20.61■□□□□ 0.89
PSMB1-201ENST00000262193 MROH2BQ7Z745 1585 aa20.51■□□□□ 0.87
PSMB1-201ENST00000262193 ATAD2BQ9ULI0 1458 aa20.44■□□□□ 0.86
PSMB1-201ENST00000262193 SMARCA2P51531 1590 aa20.44■□□□□ 0.86
PSMB1-201ENST00000262193 PEG3Q9GZU2 1588 aa20.39■□□□□ 0.85
PSMB1-201ENST00000262193 NCAPD3P42695 1498 aa20.39■□□□□ 0.85
PSMB1-201ENST00000262193 HMGXB3Q12766 1538 aa20.33■□□□□ 0.85
PSMB1-201ENST00000262193 RSF1Q96T23 1441 aaPredicted RBP20.32■□□□□ 0.84
PSMB1-201ENST00000262193 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
PSMB1-201ENST00000262193 WIZO95785 1651 aa20.29■□□□□ 0.84
PSMB1-201ENST00000262193 TOP2AP11388 1531 aaKnown RBP20.1■□□□□ 0.81
PSMB1-201ENST00000262193 SUPT5HO00267 1087 aaKnown RBP19.93■□□□□ 0.78
PSMB1-201ENST00000262193 NESP48681 1621 aa19.87■□□□□ 0.77
PSMB1-201ENST00000262193 LAMC3Q9Y6N6 1575 aa19.85■□□□□ 0.77
PSMB1-201ENST00000262193 CCDC88BA6NC98 1476 aa19.84■□□□□ 0.77
PSMB1-201ENST00000262193 CADPSQ9ULU8 1353 aa19.82■□□□□ 0.76
PSMB1-201ENST00000262193 ERCC6Q03468 1493 aa19.74■□□□□ 0.75
PSMB1-201ENST00000262193 CFTRP13569 1480 aa19.73■□□□□ 0.75
PSMB1-201ENST00000262193 PDS5BQ9NTI5 1447 aa19.7■□□□□ 0.74
PSMB1-201ENST00000262193 KIF21AQ7Z4S6 1674 aa19.65■□□□□ 0.74
PSMB1-201ENST00000262193 PRDM2Q13029 1718 aa19.62■□□□□ 0.73
PSMB1-201ENST00000262193 FANCD2Q9BXW9 1451 aa19.6■□□□□ 0.73
PSMB1-201ENST00000262193 CEP164Q9UPV0 1460 aa19.57■□□□□ 0.72
PSMB1-201ENST00000262193 THOC2Q8NI27 1593 aaKnown RBP19.55■□□□□ 0.72
PSMB1-201ENST00000262193 MRC2Q9UBG0 1479 aa19.51■□□□□ 0.71
PSMB1-201ENST00000262193 CUX2O14529 1486 aa19.46■□□□□ 0.71
PSMB1-201ENST00000262193 WDR62O43379 1518 aa19.44■□□□□ 0.7
PSMB1-201ENST00000262193 URB2Q14146 1524 aaKnown RBP19.4■□□□□ 0.7
PSMB1-201ENST00000262193 DNMBPQ6XZF7 1577 aa19.32■□□□□ 0.68
PSMB1-201ENST00000262193 TOPBP1Q92547 1522 aa19.31■□□□□ 0.68
PSMB1-201ENST00000262193 ABCC8Q09428 1581 aa19.3■□□□□ 0.68
PSMB1-201ENST00000262193 CUX1P39880 1505 aa19.23■□□□□ 0.67
PSMB1-201ENST00000262193 WRNQ14191 1432 aaPredicted RBP eCLIP19.17■□□□□ 0.66
PSMB1-201ENST00000262193 POLA1P09884 1462 aaPredicted RBP19.16■□□□□ 0.66
PSMB1-201ENST00000262193 FGD5Q6ZNL6 1462 aa19.15■□□□□ 0.66
PSMB1-201ENST00000262193 IFT140Q96RY7 1462 aa19.15■□□□□ 0.66
PSMB1-201ENST00000262193 SYNJ1O43426 1573 aa19.12■□□□□ 0.65
PSMB1-201ENST00000262193 BIVM-ERCC5R4GMW8 1640 aa19.11■□□□□ 0.65
PSMB1-201ENST00000262193 TOP2BQ02880 1626 aa19.11■□□□□ 0.65
PSMB1-201ENST00000262193 TARBP1Q13395 1621 aaKnown RBP19.08■□□□□ 0.65
PSMB1-201ENST00000262193 RAD54L2Q9Y4B4 1467 aa19.07■□□□□ 0.64
PSMB1-201ENST00000262193 SOGA1O94964 1423 aa19.07■□□□□ 0.64
PSMB1-201ENST00000262193 ZNF608Q9ULD9 1512 aaPredicted RBP19.05■□□□□ 0.64
PSMB1-201ENST00000262193 EIF4G3O43432 1585 aaKnown RBP19■□□□□ 0.63
PSMB1-201ENST00000262193 WDR97A6NE52 1622 aa18.98■□□□□ 0.63
PSMB1-201ENST00000262193 ABCA10Q8WWZ4 1543 aa18.95■□□□□ 0.62
PSMB1-201ENST00000262193 AQRO60306 1485 aaKnown RBP eCLIP18.95■□□□□ 0.625e-7■■■□□ 17.7
PSMB1-201ENST00000262193 TDRD9Q8NDG6 1382 aaKnown RBP18.94■□□□□ 0.62
PSMB1-201ENST00000262193 ABCA5Q8WWZ7 1642 aa18.88■□□□□ 0.61
PSMB1-201ENST00000262193 GAPVD1Q14C86 1478 aa18.86■□□□□ 0.61
PSMB1-201ENST00000262193 GRIN2BQ13224 1484 aa18.84■□□□□ 0.61
PSMB1-201ENST00000262193 PBRM1Q86U86 1689 aa18.83■□□□□ 0.61
PSMB1-201ENST00000262193 TRIM41Q8WV44 630 aa18.81■□□□□ 0.6
PSMB1-201ENST00000262193 SNAPC4Q5SXM2 1469 aa18.8■□□□□ 0.6
PSMB1-201ENST00000262193 MAGI1Q96QZ7 1491 aaPredicted RBP18.77■□□□□ 0.6
PSMB1-201ENST00000262193 KIF27Q86VH2 1401 aa18.75■□□□□ 0.59
PSMB1-201ENST00000262193 CHD1O14646 1710 aa18.73■□□□□ 0.59
PSMB1-201ENST00000262193 ERICH3Q5RHP9 1530 aa18.73■□□□□ 0.59
PSMB1-201ENST00000262193 ADAMTS12P58397 1594 aa18.7■□□□□ 0.58
PSMB1-201ENST00000262193 SYNJ2O15056 1496 aa18.7■□□□□ 0.58
PSMB1-201ENST00000262193 FBLN2P98095 1184 aa18.69■□□□□ 0.58
PSMB1-201ENST00000262193 CHIC1Q5VXU3 224 aa18.68■□□□□ 0.58
PSMB1-201ENST00000262193 OSCARQ8IYS5 282 aa18.66■□□□□ 0.58
PSMB1-201ENST00000262193 CHMP7Q8WUX9 453 aaPredicted RBP18.66■□□□□ 0.58
PSMB1-201ENST00000262193 FHAD1B1AJZ9 1412 aa18.66■□□□□ 0.58
PSMB1-201ENST00000262193 DNAJC5Q9H3Z4 198 aa18.63■□□□□ 0.57
PSMB1-201ENST00000262193 IGF1RP08069 1367 aa18.63■□□□□ 0.57
PSMB1-201ENST00000262193 RUSC2Q8N2Y8 1516 aa18.62■□□□□ 0.57
PSMB1-201ENST00000262193 CUL7Q14999 1698 aa18.61■□□□□ 0.57
PSMB1-201ENST00000262193 GRIN2AQ12879 1464 aa18.6■□□□□ 0.57
PSMB1-201ENST00000262193 CARMIL1Q5VZK9 1371 aa18.54■□□□□ 0.56
PSMB1-201ENST00000262193 CLASP1Q7Z460 1538 aa18.52■□□□□ 0.56
PSMB1-201ENST00000262193 CEP170Q5SW79 1584 aa18.51■□□□□ 0.55
PSMB1-201ENST00000262193 NUP160Q12769 1436 aa18.5■□□□□ 0.55
PSMB1-201ENST00000262193 EEA1Q15075 1411 aa18.5■□□□□ 0.55
PSMB1-201ENST00000262193 RAPGEF2Q9Y4G8 1499 aa18.46■□□□□ 0.54
PSMB1-201ENST00000262193 FAM9AQ8IZU1 332 aaPredicted RBP18.43■□□□□ 0.54
PSMB1-201ENST00000262193 CSRNP3Q8WYN3 585 aa18.43■□□□□ 0.54
PSMB1-201ENST00000262193 PRXQ9BXM0 1461 aa18.43■□□□□ 0.54
PSMB1-201ENST00000262193 ARHGEF11O15085 1522 aa18.39■□□□□ 0.54
PSMB1-201ENST00000262193 RIMBP3CA6NJZ7 1639 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms