RNA–Protein interactions for RNA: ENST00000261489.6

TSC22D1-201, Transcript of TSC22 domain family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-201ENST00000261489 NISCHQ9Y2I1 1504 aa19.9■□□□□ 0.78
TSC22D1-201ENST00000261489 DCAF8L2P0C7V8 631 aa17.19■□□□□ 0.34
TSC22D1-201ENST00000261489 CCDC180Q9P1Z9 1646 aa17.08■□□□□ 0.32
TSC22D1-201ENST00000261489 ABCC9O60706 1549 aa16.84■□□□□ 0.29
TSC22D1-201ENST00000261489 SHROOM4Q9ULL8 1493 aa16.74■□□□□ 0.27
TSC22D1-201ENST00000261489 ZCCHC6Q5VYS8 1495 aaKnown RBP16.63■□□□□ 0.25
TSC22D1-201ENST00000261489 DCAF1Q9Y4B6 1507 aa16.18■□□□□ 0.18
TSC22D1-201ENST00000261489 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
TSC22D1-201ENST00000261489 SUPT5HO00267 1087 aaKnown RBP16.1■□□□□ 0.17
TSC22D1-201ENST00000261489 NACADO15069 1562 aa16.08■□□□□ 0.16
TSC22D1-201ENST00000261489 PABPN1Q86U42 306 aaKnown RBP eCLIP16.08■□□□□ 0.16
TSC22D1-201ENST00000261489 RB1CC1Q8TDY2 1594 aa16.03■□□□□ 0.16
TSC22D1-201ENST00000261489 MYO15BQ96JP2 1530 aa15.98■□□□□ 0.15
TSC22D1-201ENST00000261489 CECR2Q9BXF3 1484 aa15.68■□□□□ 0.1
TSC22D1-201ENST00000261489 UNC13AQ9UPW8 1703 aa15.65■□□□□ 0.1
TSC22D1-201ENST00000261489 BICRAQ9NZM4 1560 aa15.59■□□□□ 0.09
TSC22D1-201ENST00000261489 CHIC1Q5VXU3 224 aa15.54■□□□□ 0.08
TSC22D1-201ENST00000261489 RSF1Q96T23 1441 aaPredicted RBP15.53■□□□□ 0.08
TSC22D1-201ENST00000261489 MROH2BQ7Z745 1585 aa15.49■□□□□ 0.07
TSC22D1-201ENST00000261489 WIZO95785 1651 aa15.33■□□□□ 0.04
TSC22D1-201ENST00000261489 BAZ1AQ9NRL2 1556 aaPredicted RBP15.32■□□□□ 0.04
TSC22D1-201ENST00000261489 SMARCA4P51532 1647 aa15.26■□□□□ 0.03
TSC22D1-201ENST00000261489 AEBP2Q6ZN18 517 aaPredicted RBP15.21■□□□□ 0.02
TSC22D1-201ENST00000261489 EIF4G1Q04637 1599 aaKnown RBP15.18■□□□□ 0.02
TSC22D1-201ENST00000261489 ATAD2BQ9ULI0 1458 aa15.15■□□□□ 0.02
TSC22D1-201ENST00000261489 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
TSC22D1-201ENST00000261489 BAZ1BQ9UIG0 1483 aaKnown RBP15.08■□□□□ 0.01
TSC22D1-201ENST00000261489 CCDC88BA6NC98 1476 aa15.04■□□□□ -0
TSC22D1-201ENST00000261489 CC2D2AQ9P2K1 1620 aa15.01□□□□□ -0.01
TSC22D1-201ENST00000261489 TOP2AP11388 1531 aaKnown RBP15.01□□□□□ -0.01
TSC22D1-201ENST00000261489 SMARCA2P51531 1590 aa15□□□□□ -0.01
TSC22D1-201ENST00000261489 TRIM41Q8WV44 630 aa14.97□□□□□ -0.01
TSC22D1-201ENST00000261489 EHMT2Q96KQ7 1210 aa14.96□□□□□ -0.01
TSC22D1-201ENST00000261489 NCAPD3P42695 1498 aa14.95□□□□□ -0.02
TSC22D1-201ENST00000261489 FAM9AQ8IZU1 332 aaPredicted RBP14.95□□□□□ -0.02
TSC22D1-201ENST00000261489 PEG3Q9GZU2 1588 aa14.92□□□□□ -0.02
TSC22D1-201ENST00000261489 HMGXB3Q12766 1538 aa14.79□□□□□ -0.04
TSC22D1-201ENST00000261489 ABCC8Q09428 1581 aa14.79□□□□□ -0.04
TSC22D1-201ENST00000261489 LOC105371045A0A1W2PR82 267 aa14.77□□□□□ -0.04
TSC22D1-201ENST00000261489 NESP48681 1621 aa14.74□□□□□ -0.05
TSC22D1-201ENST00000261489 CADPSQ9ULU8 1353 aa14.69□□□□□ -0.06
TSC22D1-201ENST00000261489 CFTRP13569 1480 aa14.63□□□□□ -0.07
TSC22D1-201ENST00000261489 WRNQ14191 1432 aaPredicted RBP eCLIP14.63□□□□□ -0.07
TSC22D1-201ENST00000261489 SOGA1O94964 1423 aa14.55□□□□□ -0.08
TSC22D1-201ENST00000261489 FANCD2Q9BXW9 1451 aa14.53□□□□□ -0.08
TSC22D1-201ENST00000261489 RUSC2Q8N2Y8 1516 aa14.51□□□□□ -0.09
TSC22D1-201ENST00000261489 SYNJ1O43426 1573 aa14.5□□□□□ -0.09
TSC22D1-201ENST00000261489 RANGAP1P46060 587 aaPredicted RBP14.5□□□□□ -0.09
TSC22D1-201ENST00000261489 PDS5BQ9NTI5 1447 aa14.44□□□□□ -0.1
TSC22D1-201ENST00000261489 CUX1P39880 1505 aa14.44□□□□□ -0.1
TSC22D1-201ENST00000261489 CSRNP3Q8WYN3 585 aa14.43□□□□□ -0.1
TSC22D1-201ENST00000261489 UBTFP17480 764 aaKnown RBP14.42□□□□□ -0.1
TSC22D1-201ENST00000261489 ERCC6Q03468 1493 aa14.4□□□□□ -0.1
TSC22D1-201ENST00000261489 CEP164Q9UPV0 1460 aa14.4□□□□□ -0.1
TSC22D1-201ENST00000261489 LAMC3Q9Y6N6 1575 aa14.38□□□□□ -0.11
TSC22D1-201ENST00000261489 RAD54L2Q9Y4B4 1467 aa14.37□□□□□ -0.11
TSC22D1-201ENST00000261489 FGD5Q6ZNL6 1462 aa14.34□□□□□ -0.11
TSC22D1-201ENST00000261489 URB2Q14146 1524 aaKnown RBP14.33□□□□□ -0.11
TSC22D1-201ENST00000261489 TDRD9Q8NDG6 1382 aaKnown RBP14.33□□□□□ -0.12
TSC22D1-201ENST00000261489 TOP2BQ02880 1626 aa14.33□□□□□ -0.12
TSC22D1-201ENST00000261489 TOPBP1Q92547 1522 aa14.31□□□□□ -0.12
TSC22D1-201ENST00000261489 CUX2O14529 1486 aa14.3□□□□□ -0.12
TSC22D1-201ENST00000261489 KIF21AQ7Z4S6 1674 aa14.3□□□□□ -0.12
TSC22D1-201ENST00000261489 POLA1P09884 1462 aaPredicted RBP14.28□□□□□ -0.12
TSC22D1-201ENST00000261489 PPARGC1BQ86YN6 1023 aaKnown RBP14.27□□□□□ -0.12
TSC22D1-201ENST00000261489 KIF27Q86VH2 1401 aa14.24□□□□□ -0.13
TSC22D1-201ENST00000261489 TTBK1Q5TCY1 1321 aaPredicted RBP14.23□□□□□ -0.13
TSC22D1-201ENST00000261489 BIVM-ERCC5R4GMW8 1640 aa14.22□□□□□ -0.13
TSC22D1-201ENST00000261489 DNMBPQ6XZF7 1577 aa14.21□□□□□ -0.13
TSC22D1-201ENST00000261489 PRDM2Q13029 1718 aa14.21□□□□□ -0.13
TSC22D1-201ENST00000261489 MRC2Q9UBG0 1479 aa14.2□□□□□ -0.14
TSC22D1-201ENST00000261489 AQRO60306 1485 aaKnown RBP eCLIP14.2□□□□□ -0.143e-6■■■□□ 15.7
TSC22D1-201ENST00000261489 FBLN2P98095 1184 aa14.2□□□□□ -0.14
TSC22D1-201ENST00000261489 IGF1RP08069 1367 aa14.19□□□□□ -0.14
TSC22D1-201ENST00000261489 RAPGEF2Q9Y4G8 1499 aa14.19□□□□□ -0.14
TSC22D1-201ENST00000261489 EEA1Q15075 1411 aa14.16□□□□□ -0.14
TSC22D1-201ENST00000261489 ZNF608Q9ULD9 1512 aaPredicted RBP14.14□□□□□ -0.15
TSC22D1-201ENST00000261489 CARMIL1Q5VZK9 1371 aa14.14□□□□□ -0.15
TSC22D1-201ENST00000261489 P3H3Q8IVL6 736 aa14.13□□□□□ -0.15
TSC22D1-201ENST00000261489 GOLGA3Q08378 1498 aa14.09□□□□□ -0.15
TSC22D1-201ENST00000261489 ABCA10Q8WWZ4 1543 aa14.09□□□□□ -0.15
TSC22D1-201ENST00000261489 GAPVD1Q14C86 1478 aa14.09□□□□□ -0.15
TSC22D1-201ENST00000261489 CEP162Q5TB80 1403 aa14.07□□□□□ -0.16
TSC22D1-201ENST00000261489 PHF23Q9BUL5 403 aaPredicted RBP14.05□□□□□ -0.16
TSC22D1-201ENST00000261489 TNIKQ9UKE5 1360 aa14.05□□□□□ -0.16
TSC22D1-201ENST00000261489 PRXQ9BXM0 1461 aa14.05□□□□□ -0.16
TSC22D1-201ENST00000261489 WDR62O43379 1518 aa14.04□□□□□ -0.16
TSC22D1-201ENST00000261489 ATP1B4Q9UN42 357 aaPredicted RBP14.04□□□□□ -0.16
TSC22D1-201ENST00000261489 CHMP7Q8WUX9 453 aaPredicted RBP14.03□□□□□ -0.16
TSC22D1-201ENST00000261489 THOC2Q8NI27 1593 aaKnown RBP14.01□□□□□ -0.17
TSC22D1-201ENST00000261489 IFT140Q96RY7 1462 aa14□□□□□ -0.17
TSC22D1-201ENST00000261489 TARBP1Q13395 1621 aaKnown RBP14□□□□□ -0.17
TSC22D1-201ENST00000261489 PCGF6Q9BYE7 350 aa13.99□□□□□ -0.17
TSC22D1-201ENST00000261489 CLIP1P30622 1438 aa13.99□□□□□ -0.17
TSC22D1-201ENST00000261489 ARID3CA6NKF2 412 aa13.94□□□□□ -0.18
TSC22D1-201ENST00000261489 KIF21BO75037 1637 aa13.94□□□□□ -0.18
TSC22D1-201ENST00000261489 GRIN2BQ13224 1484 aa13.93□□□□□ -0.18
TSC22D1-201ENST00000261489 SNAPC4Q5SXM2 1469 aa13.92□□□□□ -0.18
TSC22D1-201ENST00000261489 ABCA5Q8WWZ7 1642 aa13.9□□□□□ -0.18
TSC22D1-201ENST00000261489 EIF4G3O43432 1585 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms