RNA–Protein interactions for RNA: ENST00000260229.4

MMP27-201, Transcript of matrix metallopeptidase 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP27, Length 1,913 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP27-201ENST00000260229 NISCHQ9Y2I1 1504 aa24.76■■□□□ 1.55
MMP27-201ENST00000260229 CCDC180Q9P1Z9 1646 aa21.89■■□□□ 1.1
MMP27-201ENST00000260229 ABCC9O60706 1549 aa21.33■■□□□ 1
MMP27-201ENST00000260229 DCAF8L2P0C7V8 631 aa20.71■□□□□ 0.91
MMP27-201ENST00000260229 ZCCHC6Q5VYS8 1495 aaKnown RBP20.66■□□□□ 0.9
MMP27-201ENST00000260229 NACADO15069 1562 aa20.56■□□□□ 0.88
MMP27-201ENST00000260229 RB1CC1Q8TDY2 1594 aa20.55■□□□□ 0.88
MMP27-201ENST00000260229 MYO15BQ96JP2 1530 aa20.47■□□□□ 0.87
MMP27-201ENST00000260229 DCAF1Q9Y4B6 1507 aa20.46■□□□□ 0.87
MMP27-201ENST00000260229 SCRIBQ14160 1630 aa20.05■□□□□ 0.8
MMP27-201ENST00000260229 UNC13AQ9UPW8 1703 aa20.04■□□□□ 0.8
MMP27-201ENST00000260229 PABPN1Q86U42 306 aaKnown RBP eCLIP19.98■□□□□ 0.79
MMP27-201ENST00000260229 BICRAQ9NZM4 1560 aa19.91■□□□□ 0.78
MMP27-201ENST00000260229 SHROOM4Q9ULL8 1493 aa19.75■□□□□ 0.75
MMP27-201ENST00000260229 DNAJC5BQ9UF47 199 aa19.4■□□□□ 0.7
MMP27-201ENST00000260229 EIF4G1Q04637 1599 aaKnown RBP19.39■□□□□ 0.69
MMP27-201ENST00000260229 CECR2Q9BXF3 1484 aa19.29■□□□□ 0.68
MMP27-201ENST00000260229 CC2D2AQ9P2K1 1620 aa19.26■□□□□ 0.67
MMP27-201ENST00000260229 BAZ1AQ9NRL2 1556 aaPredicted RBP19.18■□□□□ 0.66
MMP27-201ENST00000260229 SMARCA4P51532 1647 aa19.17■□□□□ 0.66
MMP27-201ENST00000260229 MROH2BQ7Z745 1585 aa19.1■□□□□ 0.65
MMP27-201ENST00000260229 ATAD2BQ9ULI0 1458 aa19.03■□□□□ 0.64
MMP27-201ENST00000260229 SMARCA2P51531 1590 aa19.01■□□□□ 0.63
MMP27-201ENST00000260229 NCAPD3P42695 1498 aa18.98■□□□□ 0.63
MMP27-201ENST00000260229 PEG3Q9GZU2 1588 aa18.95■□□□□ 0.62
MMP27-201ENST00000260229 RSF1Q96T23 1441 aaPredicted RBP18.95■□□□□ 0.62
MMP27-201ENST00000260229 BAZ1BQ9UIG0 1483 aaKnown RBP18.9■□□□□ 0.62
MMP27-201ENST00000260229 WIZO95785 1651 aa18.9■□□□□ 0.62
MMP27-201ENST00000260229 HMGXB3Q12766 1538 aa18.89■□□□□ 0.62
MMP27-201ENST00000260229 TOP2AP11388 1531 aaKnown RBP18.7■□□□□ 0.58
MMP27-201ENST00000260229 SUPT5HO00267 1087 aaKnown RBP18.68■□□□□ 0.58
MMP27-201ENST00000260229 CCDC88BA6NC98 1476 aa18.5■□□□□ 0.55
MMP27-201ENST00000260229 NESP48681 1621 aa18.5■□□□□ 0.55
MMP27-201ENST00000260229 CADPSQ9ULU8 1353 aa18.46■□□□□ 0.55
MMP27-201ENST00000260229 LAMC3Q9Y6N6 1575 aa18.44■□□□□ 0.54
MMP27-201ENST00000260229 CFTRP13569 1480 aa18.37■□□□□ 0.53
MMP27-201ENST00000260229 ERCC6Q03468 1493 aa18.37■□□□□ 0.53
MMP27-201ENST00000260229 PDS5BQ9NTI5 1447 aa18.34■□□□□ 0.53
MMP27-201ENST00000260229 KIF21AQ7Z4S6 1674 aa18.25■□□□□ 0.51
MMP27-201ENST00000260229 FANCD2Q9BXW9 1451 aa18.25■□□□□ 0.51
MMP27-201ENST00000260229 CEP164Q9UPV0 1460 aa18.21■□□□□ 0.51
MMP27-201ENST00000260229 PRDM2Q13029 1718 aa18.19■□□□□ 0.5
MMP27-201ENST00000260229 THOC2Q8NI27 1593 aaKnown RBP18.14■□□□□ 0.49
MMP27-201ENST00000260229 MRC2Q9UBG0 1479 aa18.14■□□□□ 0.49
MMP27-201ENST00000260229 CUX2O14529 1486 aa18.06■□□□□ 0.48
MMP27-201ENST00000260229 WDR62O43379 1518 aa18.06■□□□□ 0.48
MMP27-201ENST00000260229 URB2Q14146 1524 aaKnown RBP18.05■□□□□ 0.48
MMP27-201ENST00000260229 TOPBP1Q92547 1522 aa17.97■□□□□ 0.47
MMP27-201ENST00000260229 ABCC8Q09428 1581 aa17.96■□□□□ 0.47
MMP27-201ENST00000260229 DNMBPQ6XZF7 1577 aa17.96■□□□□ 0.47
MMP27-201ENST00000260229 CUX1P39880 1505 aa17.9■□□□□ 0.46
MMP27-201ENST00000260229 WRNQ14191 1432 aaPredicted RBP eCLIP17.87■□□□□ 0.45
MMP27-201ENST00000260229 POLA1P09884 1462 aaPredicted RBP17.83■□□□□ 0.45
MMP27-201ENST00000260229 FGD5Q6ZNL6 1462 aa17.82■□□□□ 0.44
MMP27-201ENST00000260229 IFT140Q96RY7 1462 aa17.81■□□□□ 0.44
MMP27-201ENST00000260229 SYNJ1O43426 1573 aa17.81■□□□□ 0.44
MMP27-201ENST00000260229 TOP2BQ02880 1626 aa17.78■□□□□ 0.44
MMP27-201ENST00000260229 SOGA1O94964 1423 aa17.78■□□□□ 0.44
MMP27-201ENST00000260229 RAD54L2Q9Y4B4 1467 aa17.77■□□□□ 0.44
MMP27-201ENST00000260229 BIVM-ERCC5R4GMW8 1640 aa17.76■□□□□ 0.43
MMP27-201ENST00000260229 TARBP1Q13395 1621 aaKnown RBP17.74■□□□□ 0.43
MMP27-201ENST00000260229 ZNF608Q9ULD9 1512 aaPredicted RBP17.73■□□□□ 0.43
MMP27-201ENST00000260229 TDRD9Q8NDG6 1382 aaKnown RBP17.67■□□□□ 0.42
MMP27-201ENST00000260229 AQRO60306 1485 aaKnown RBP eCLIP17.66■□□□□ 0.42
MMP27-201ENST00000260229 EIF4G3O43432 1585 aaKnown RBP17.65■□□□□ 0.42
MMP27-201ENST00000260229 ABCA10Q8WWZ4 1543 aa17.64■□□□□ 0.41
MMP27-201ENST00000260229 TRIM41Q8WV44 630 aa17.62■□□□□ 0.41
MMP27-201ENST00000260229 WDR97A6NE52 1622 aa17.62■□□□□ 0.41
MMP27-201ENST00000260229 GAPVD1Q14C86 1478 aa17.57■□□□□ 0.4
MMP27-201ENST00000260229 ABCA5Q8WWZ7 1642 aa17.54■□□□□ 0.4
MMP27-201ENST00000260229 GRIN2BQ13224 1484 aa17.54■□□□□ 0.4
MMP27-201ENST00000260229 CHIC1Q5VXU3 224 aa17.51■□□□□ 0.39
MMP27-201ENST00000260229 SNAPC4Q5SXM2 1469 aa17.5■□□□□ 0.39
MMP27-201ENST00000260229 KIF27Q86VH2 1401 aa17.49■□□□□ 0.39
MMP27-201ENST00000260229 PBRM1Q86U86 1689 aa17.48■□□□□ 0.39
MMP27-201ENST00000260229 MAGI1Q96QZ7 1491 aaPredicted RBP17.46■□□□□ 0.39
MMP27-201ENST00000260229 FBLN2P98095 1184 aa17.46■□□□□ 0.39
MMP27-201ENST00000260229 ERICH3Q5RHP9 1530 aa17.43■□□□□ 0.38
MMP27-201ENST00000260229 CHMP7Q8WUX9 453 aaPredicted RBP17.41■□□□□ 0.38
MMP27-201ENST00000260229 SYNJ2O15056 1496 aa17.4■□□□□ 0.38
MMP27-201ENST00000260229 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
MMP27-201ENST00000260229 RUSC2Q8N2Y8 1516 aa17.39■□□□□ 0.37
MMP27-201ENST00000260229 IGF1RP08069 1367 aa17.39■□□□□ 0.37
MMP27-201ENST00000260229 ADAMTS12P58397 1594 aa17.38■□□□□ 0.37
MMP27-201ENST00000260229 CHD1O14646 1710 aa17.37■□□□□ 0.37
MMP27-201ENST00000260229 FHAD1B1AJZ9 1412 aa17.37■□□□□ 0.37
MMP27-201ENST00000260229 DNAJC5Q9H3Z4 198 aa17.32■□□□□ 0.36
MMP27-201ENST00000260229 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
MMP27-201ENST00000260229 CUL7Q14999 1698 aa17.3■□□□□ 0.36
MMP27-201ENST00000260229 CARMIL1Q5VZK9 1371 aa17.3■□□□□ 0.36
MMP27-201ENST00000260229 FAM9AQ8IZU1 332 aaPredicted RBP17.27■□□□□ 0.36
MMP27-201ENST00000260229 EEA1Q15075 1411 aa17.26■□□□□ 0.35
MMP27-201ENST00000260229 CSRNP3Q8WYN3 585 aa17.24■□□□□ 0.35
MMP27-201ENST00000260229 NUP160Q12769 1436 aa17.22■□□□□ 0.35
MMP27-201ENST00000260229 CEP170Q5SW79 1584 aa17.21■□□□□ 0.35
MMP27-201ENST00000260229 RAPGEF2Q9Y4G8 1499 aa17.2■□□□□ 0.34
MMP27-201ENST00000260229 CLASP1Q7Z460 1538 aa17.19■□□□□ 0.34
MMP27-201ENST00000260229 PRXQ9BXM0 1461 aa17.18■□□□□ 0.34
MMP27-201ENST00000260229 KIAA0586Q9BVV6 1533 aa17.1■□□□□ 0.33
MMP27-201ENST00000260229 ARHGEF11O15085 1522 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms