RNA–Protein interactions for RNA: ENST00000259119.8

SKIL-201, Transcript of SKI like proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKIL, Length 3,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIL-201ENST00000259119 DNAJC5Q9H3Z4 198 aa10.57□□□□□ -0.72
SKIL-201ENST00000259119 NISCHQ9Y2I1 1504 aa10.41□□□□□ -0.74
SKIL-201ENST00000259119 CHIC1Q5VXU3 224 aa10.22□□□□□ -0.77
SKIL-201ENST00000259119 AEBP2Q6ZN18 517 aaPredicted RBP9.89□□□□□ -0.83
SKIL-201ENST00000259119 CCDC180Q9P1Z9 1646 aa9.87□□□□□ -0.83
SKIL-201ENST00000259119 DNAJC5BQ9UF47 199 aa9.77□□□□□ -0.84
SKIL-201ENST00000259119 ILDR1Q86SU0 546 aaPredicted RBP9.61□□□□□ -0.87
SKIL-201ENST00000259119 TRIM41Q8WV44 630 aa9.33□□□□□ -0.92
SKIL-201ENST00000259119 MYO15BQ96JP2 1530 aa9.26□□□□□ -0.93
SKIL-201ENST00000259119 PHF23Q9BUL5 403 aaPredicted RBP9.23□□□□□ -0.93
SKIL-201ENST00000259119 SHROOM4Q9ULL8 1493 aa9.22□□□□□ -0.93
SKIL-201ENST00000259119 RB1CC1Q8TDY2 1594 aa9.19□□□□□ -0.94
SKIL-201ENST00000259119 NACADO15069 1562 aa9.17□□□□□ -0.94
SKIL-201ENST00000259119 ABCC9O60706 1549 aa9.15□□□□□ -0.94
SKIL-201ENST00000259119 UNC13AQ9UPW8 1703 aa9.05□□□□□ -0.96
SKIL-201ENST00000259119 DCAF1Q9Y4B6 1507 aa9□□□□□ -0.97
SKIL-201ENST00000259119 SOCS7O14512 581 aa8.97□□□□□ -0.97
SKIL-201ENST00000259119 EHMT2Q96KQ7 1210 aa8.87□□□□□ -0.99
SKIL-201ENST00000259119 BICRAQ9NZM4 1560 aa8.87□□□□□ -0.99
SKIL-201ENST00000259119 LMTK3Q96Q04 1460 aa8.85□□□□□ -0.99
SKIL-201ENST00000259119 ZCCHC6Q5VYS8 1495 aaKnown RBP8.67□□□□□ -1.02
SKIL-201ENST00000259119 SLC24A1O60721 1099 aa8.66□□□□□ -1.02
SKIL-201ENST00000259119 ILDR2Q71H61 639 aa8.65□□□□□ -1.02
SKIL-201ENST00000259119 CC2D2AQ9P2K1 1620 aa8.6□□□□□ -1.03
SKIL-201ENST00000259119 EIF4G1Q04637 1599 aaKnown RBP8.59□□□□□ -1.03
SKIL-201ENST00000259119 PLPPR3Q6T4P5 718 aa8.57□□□□□ -1.04
SKIL-201ENST00000259119 CUX2O14529 1486 aa8.51□□□□□ -1.05
SKIL-201ENST00000259119 KCNA4P22459 653 aa8.5□□□□□ -1.05
SKIL-201ENST00000259119 CECR2Q9BXF3 1484 aa8.46□□□□□ -1.06
SKIL-201ENST00000259119 HMGXB3Q12766 1538 aa8.42□□□□□ -1.06
SKIL-201ENST00000259119 SMARCA2P51531 1590 aa8.41□□□□□ -1.06
SKIL-201ENST00000259119 PEG3Q9GZU2 1588 aa8.4□□□□□ -1.06
SKIL-201ENST00000259119 CSRNP3Q8WYN3 585 aa8.4□□□□□ -1.06
SKIL-201ENST00000259119 DISP3Q9P2K9 1392 aa8.34□□□□□ -1.07
SKIL-201ENST00000259119 SCRIBQ14160 1630 aa8.33□□□□□ -1.08
SKIL-201ENST00000259119 NCAPD3P42695 1498 aa8.33□□□□□ -1.08
SKIL-201ENST00000259119 FBXO41Q8TF61 875 aa8.31□□□□□ -1.08
SKIL-201ENST00000259119 THOC2Q8NI27 1593 aaKnown RBP8.28□□□□□ -1.08
SKIL-201ENST00000259119 LAMC3Q9Y6N6 1575 aa8.28□□□□□ -1.08
SKIL-201ENST00000259119 RTN4Q9NQC3 1192 aaKnown RBP8.26□□□□□ -1.09
SKIL-201ENST00000259119 ADRA2BP18089 450 aa8.24□□□□□ -1.09
SKIL-201ENST00000259119 PRDM2Q13029 1718 aa8.24□□□□□ -1.09
SKIL-201ENST00000259119 SMARCA4P51532 1647 aa8.22□□□□□ -1.09
SKIL-201ENST00000259119 PABPN1Q86U42 306 aaKnown RBP eCLIP8.19□□□□□ -1.1
SKIL-201ENST00000259119 BAZ1AQ9NRL2 1556 aaPredicted RBP8.16□□□□□ -1.1
SKIL-201ENST00000259119 IFFO2Q5TF58 517 aa8.14□□□□□ -1.11
SKIL-201ENST00000259119 ATAD2BQ9ULI0 1458 aa8.14□□□□□ -1.11
SKIL-201ENST00000259119 WDR62O43379 1518 aa8.13□□□□□ -1.11
SKIL-201ENST00000259119 SLC4A1APQ9BWU0 796 aaKnown RBP8.11□□□□□ -1.11
SKIL-201ENST00000259119 WDR97A6NE52 1622 aa8.1□□□□□ -1.11
SKIL-201ENST00000259119 KIF21AQ7Z4S6 1674 aa8.09□□□□□ -1.11
SKIL-201ENST00000259119 TRHP20396 242 aaPredicted RBP8.09□□□□□ -1.12
SKIL-201ENST00000259119 SENP3Q9H4L4 574 aaPredicted RBP8.04□□□□□ -1.12
SKIL-201ENST00000259119 AMER1Q5JTC6 1135 aaPredicted RBP8.04□□□□□ -1.12
SKIL-201ENST00000259119 MRC2Q9UBG0 1479 aa8□□□□□ -1.13
SKIL-201ENST00000259119 ERCC6Q03468 1493 aa7.99□□□□□ -1.13
SKIL-201ENST00000259119 PDS5BQ9NTI5 1447 aa7.99□□□□□ -1.13
SKIL-201ENST00000259119 BAZ1BQ9UIG0 1483 aaKnown RBP7.99□□□□□ -1.13
SKIL-201ENST00000259119 PPP6R1Q9UPN7 881 aa7.92□□□□□ -1.14
SKIL-201ENST00000259119 ZBTB22O15209 634 aa7.92□□□□□ -1.14
SKIL-201ENST00000259119 ABCC8Q09428 1581 aa7.88□□□□□ -1.15
SKIL-201ENST00000259119 CFTRP13569 1480 aa7.88□□□□□ -1.15
SKIL-201ENST00000259119 TOP2AP11388 1531 aaKnown RBP7.88□□□□□ -1.15
SKIL-201ENST00000259119 CADPSQ9ULU8 1353 aa7.87□□□□□ -1.15
SKIL-201ENST00000259119 CEP164Q9UPV0 1460 aa7.85□□□□□ -1.15
SKIL-201ENST00000259119 ERCC6L2Q5T890 1561 aa7.84□□□□□ -1.15
SKIL-201ENST00000259119 SPATA31D1Q6ZQQ2 1576 aa7.84□□□□□ -1.15
SKIL-201ENST00000259119 NESP48681 1621 aa7.84□□□□□ -1.15
SKIL-201ENST00000259119 MROH2BQ7Z745 1585 aa7.83□□□□□ -1.16
SKIL-201ENST00000259119 RIMBP3CA6NJZ7 1639 aa7.82□□□□□ -1.16
SKIL-201ENST00000259119 RIMBP3BA6NNM3 1639 aa7.82□□□□□ -1.16
SKIL-201ENST00000259119 RIMBP3Q9UFD9 1639 aa7.82□□□□□ -1.16
SKIL-201ENST00000259119 IFT140Q96RY7 1462 aa7.81□□□□□ -1.16
SKIL-201ENST00000259119 DCAF8L2P0C7V8 631 aa7.8□□□□□ -1.16
SKIL-201ENST00000259119 RSF1Q96T23 1441 aaPredicted RBP7.79□□□□□ -1.16
SKIL-201ENST00000259119 DNMBPQ6XZF7 1577 aa7.78□□□□□ -1.16
SKIL-201ENST00000259119 TARBP1Q13395 1621 aaKnown RBP7.78□□□□□ -1.16
SKIL-201ENST00000259119 FANCD2Q9BXW9 1451 aa7.76□□□□□ -1.17
SKIL-201ENST00000259119 WIZO95785 1651 aa7.76□□□□□ -1.17
SKIL-201ENST00000259119 CLASP1Q7Z460 1538 aa7.75□□□□□ -1.17
SKIL-201ENST00000259119 NCBP3Q53F19 620 aaKnown RBP7.75□□□□□ -1.17
SKIL-201ENST00000259119 URB2Q14146 1524 aaKnown RBP7.74□□□□□ -1.17
SKIL-201ENST00000259119 CHD1O14646 1710 aa7.74□□□□□ -1.17
SKIL-201ENST00000259119 EIF4G3O43432 1585 aaKnown RBP7.74□□□□□ -1.17
SKIL-201ENST00000259119 PPP4R3CPQ6ZMV5 832 aa7.71□□□□□ -1.17
SKIL-201ENST00000259119 ARHGEF11O15085 1522 aa7.69□□□□□ -1.18
SKIL-201ENST00000259119 PRKCSHP14314 528 aaPredicted RBP7.68□□□□□ -1.18
SKIL-201ENST00000259119 SHROOM2Q13796 1616 aa7.67□□□□□ -1.18
SKIL-201ENST00000259119 NPM3O75607 178 aaKnown RBP7.67□□□□□ -1.18
SKIL-201ENST00000259119 PBRM1Q86U86 1689 aa7.67□□□□□ -1.18
SKIL-201ENST00000259119 TOPBP1Q92547 1522 aa7.66□□□□□ -1.18
SKIL-201ENST00000259119 SLC34A2O95436 690 aa7.66□□□□□ -1.18
SKIL-201ENST00000259119 POTEDQ86YR6 584 aa7.66□□□□□ -1.18
SKIL-201ENST00000259119 SYNJ1O43426 1573 aa7.66□□□□□ -1.18
SKIL-201ENST00000259119 PCDH10Q9P2E7 1040 aa7.65□□□□□ -1.18
SKIL-201ENST00000259119 MAGI1Q96QZ7 1491 aaPredicted RBP7.65□□□□□ -1.19
SKIL-201ENST00000259119 ABCA5Q8WWZ7 1642 aa7.63□□□□□ -1.19
SKIL-201ENST00000259119 OSCARQ8IYS5 282 aa7.59□□□□□ -1.19
SKIL-201ENST00000259119 BIVM-ERCC5R4GMW8 1640 aa7.58□□□□□ -1.2
SKIL-201ENST00000259119 ARAP1Q96P48 1450 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms