RNA–Protein interactions for RNA: ENST00000256585.9

REG4-201, Transcript of regenerating family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene REG4, Length 1,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REG4-201ENST00000256585 NISCHQ9Y2I1 1504 aa26.26■■□□□ 1.79
REG4-201ENST00000256585 CCDC180Q9P1Z9 1646 aa23.22■■□□□ 1.31
REG4-201ENST00000256585 ABCC9O60706 1549 aa22.57■■□□□ 1.2
REG4-201ENST00000256585 DCAF8L2P0C7V8 631 aa21.99■■□□□ 1.11
REG4-201ENST00000256585 ZCCHC6Q5VYS8 1495 aaKnown RBP21.93■■□□□ 1.1
REG4-201ENST00000256585 NACADO15069 1562 aa21.78■■□□□ 1.08
REG4-201ENST00000256585 RB1CC1Q8TDY2 1594 aa21.77■■□□□ 1.08
REG4-201ENST00000256585 DCAF1Q9Y4B6 1507 aa21.69■■□□□ 1.06
REG4-201ENST00000256585 MYO15BQ96JP2 1530 aa21.68■■□□□ 1.06
REG4-201ENST00000256585 SCRIBQ14160 1630 aa21.29■■□□□ 1
REG4-201ENST00000256585 UNC13AQ9UPW8 1703 aa21.25■□□□□ 0.99
REG4-201ENST00000256585 PABPN1Q86U42 306 aaKnown RBP eCLIP21.15■□□□□ 0.98
REG4-201ENST00000256585 BICRAQ9NZM4 1560 aa21.06■□□□□ 0.96
REG4-201ENST00000256585 SHROOM4Q9ULL8 1493 aa21.02■□□□□ 0.95
REG4-201ENST00000256585 EIF4G1Q04637 1599 aaKnown RBP20.52■□□□□ 0.88
REG4-201ENST00000256585 CECR2Q9BXF3 1484 aa20.46■□□□□ 0.87
REG4-201ENST00000256585 DNAJC5BQ9UF47 199 aa20.45■□□□□ 0.86
REG4-201ENST00000256585 CC2D2AQ9P2K1 1620 aa20.39■□□□□ 0.86
REG4-201ENST00000256585 BAZ1AQ9NRL2 1556 aaPredicted RBP20.35■□□□□ 0.85
REG4-201ENST00000256585 SMARCA4P51532 1647 aa20.34■□□□□ 0.85
REG4-201ENST00000256585 MROH2BQ7Z745 1585 aa20.26■□□□□ 0.83
REG4-201ENST00000256585 SMARCA2P51531 1590 aa20.16■□□□□ 0.82
REG4-201ENST00000256585 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
REG4-201ENST00000256585 RSF1Q96T23 1441 aaPredicted RBP20.11■□□□□ 0.81
REG4-201ENST00000256585 PEG3Q9GZU2 1588 aa20.09■□□□□ 0.81
REG4-201ENST00000256585 NCAPD3P42695 1498 aa20.09■□□□□ 0.81
REG4-201ENST00000256585 WIZO95785 1651 aa20.07■□□□□ 0.8
REG4-201ENST00000256585 BAZ1BQ9UIG0 1483 aaKnown RBP20.05■□□□□ 0.8
REG4-201ENST00000256585 HMGXB3Q12766 1538 aa20.03■□□□□ 0.8
REG4-201ENST00000256585 SUPT5HO00267 1087 aaKnown RBP19.91■□□□□ 0.78
REG4-201ENST00000256585 TOP2AP11388 1531 aaKnown RBP19.86■□□□□ 0.77
REG4-201ENST00000256585 CCDC88BA6NC98 1476 aa19.63■□□□□ 0.73
REG4-201ENST00000256585 NESP48681 1621 aa19.59■□□□□ 0.73
REG4-201ENST00000256585 CADPSQ9ULU8 1353 aa19.54■□□□□ 0.72
REG4-201ENST00000256585 LAMC3Q9Y6N6 1575 aa19.53■□□□□ 0.72
REG4-201ENST00000256585 CFTRP13569 1480 aa19.46■□□□□ 0.71
REG4-201ENST00000256585 ERCC6Q03468 1493 aa19.46■□□□□ 0.71
REG4-201ENST00000256585 PDS5BQ9NTI5 1447 aa19.43■□□□□ 0.7
REG4-201ENST00000256585 AEBP2Q6ZN18 517 aaPredicted RBP19.4■□□□□ 0.7
REG4-201ENST00000256585 KIF21AQ7Z4S6 1674 aa19.35■□□□□ 0.69
REG4-201ENST00000256585 PRDM2Q13029 1718 aa19.34■□□□□ 0.69
REG4-201ENST00000256585 FANCD2Q9BXW9 1451 aa19.34■□□□□ 0.69
REG4-201ENST00000256585 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
REG4-201ENST00000256585 MRC2Q9UBG0 1479 aa19.21■□□□□ 0.67
REG4-201ENST00000256585 THOC2Q8NI27 1593 aaKnown RBP19.2■□□□□ 0.66
REG4-201ENST00000256585 WDR62O43379 1518 aa19.12■□□□□ 0.65
REG4-201ENST00000256585 URB2Q14146 1524 aaKnown RBP19.12■□□□□ 0.65
REG4-201ENST00000256585 CUX2O14529 1486 aa19.09■□□□□ 0.65
REG4-201ENST00000256585 TOPBP1Q92547 1522 aa19.06■□□□□ 0.64
REG4-201ENST00000256585 ABCC8Q09428 1581 aa19.04■□□□□ 0.64
REG4-201ENST00000256585 DNMBPQ6XZF7 1577 aa19.04■□□□□ 0.64
REG4-201ENST00000256585 CUX1P39880 1505 aa18.99■□□□□ 0.63
REG4-201ENST00000256585 WRNQ14191 1432 aaPredicted RBP eCLIP18.99■□□□□ 0.63
REG4-201ENST00000256585 FGD5Q6ZNL6 1462 aa18.92■□□□□ 0.62
REG4-201ENST00000256585 SYNJ1O43426 1573 aa18.91■□□□□ 0.62
REG4-201ENST00000256585 POLA1P09884 1462 aaPredicted RBP18.91■□□□□ 0.62
REG4-201ENST00000256585 TOP2BQ02880 1626 aa18.89■□□□□ 0.61
REG4-201ENST00000256585 IFT140Q96RY7 1462 aa18.88■□□□□ 0.61
REG4-201ENST00000256585 BIVM-ERCC5R4GMW8 1640 aa18.87■□□□□ 0.61
REG4-201ENST00000256585 SOGA1O94964 1423 aa18.85■□□□□ 0.61
REG4-201ENST00000256585 RAD54L2Q9Y4B4 1467 aa18.84■□□□□ 0.61
REG4-201ENST00000256585 TARBP1Q13395 1621 aaKnown RBP18.79■□□□□ 0.6
REG4-201ENST00000256585 ZNF608Q9ULD9 1512 aaPredicted RBP18.77■□□□□ 0.6
REG4-201ENST00000256585 TRIM41Q8WV44 630 aa18.76■□□□□ 0.59
REG4-201ENST00000256585 TDRD9Q8NDG6 1382 aaKnown RBP18.73■□□□□ 0.59
REG4-201ENST00000256585 AQRO60306 1485 aaKnown RBP eCLIP18.71■□□□□ 0.59
REG4-201ENST00000256585 ABCA10Q8WWZ4 1543 aa18.71■□□□□ 0.59
REG4-201ENST00000256585 EIF4G3O43432 1585 aaKnown RBP18.71■□□□□ 0.59
REG4-201ENST00000256585 WDR97A6NE52 1622 aa18.7■□□□□ 0.58
REG4-201ENST00000256585 CHIC1Q5VXU3 224 aa18.66■□□□□ 0.58
REG4-201ENST00000256585 GAPVD1Q14C86 1478 aa18.64■□□□□ 0.57
REG4-201ENST00000256585 ABCA5Q8WWZ7 1642 aa18.61■□□□□ 0.57
REG4-201ENST00000256585 GRIN2BQ13224 1484 aa18.6■□□□□ 0.57
REG4-201ENST00000256585 KIF27Q86VH2 1401 aa18.58■□□□□ 0.56
REG4-201ENST00000256585 PBRM1Q86U86 1689 aa18.57■□□□□ 0.56
REG4-201ENST00000256585 SNAPC4Q5SXM2 1469 aa18.55■□□□□ 0.56
REG4-201ENST00000256585 FBLN2P98095 1184 aa18.52■□□□□ 0.55
REG4-201ENST00000256585 MAGI1Q96QZ7 1491 aaPredicted RBP18.5■□□□□ 0.55
REG4-201ENST00000256585 ERICH3Q5RHP9 1530 aa18.49■□□□□ 0.55
REG4-201ENST00000256585 RUSC2Q8N2Y8 1516 aa18.47■□□□□ 0.55
REG4-201ENST00000256585 CHMP7Q8WUX9 453 aaPredicted RBP18.46■□□□□ 0.55
REG4-201ENST00000256585 ADAMTS12P58397 1594 aa18.44■□□□□ 0.54
REG4-201ENST00000256585 SYNJ2O15056 1496 aa18.44■□□□□ 0.54
REG4-201ENST00000256585 IGF1RP08069 1367 aa18.43■□□□□ 0.54
REG4-201ENST00000256585 CHD1O14646 1710 aa18.43■□□□□ 0.54
REG4-201ENST00000256585 FHAD1B1AJZ9 1412 aa18.42■□□□□ 0.54
REG4-201ENST00000256585 FAM9AQ8IZU1 332 aaPredicted RBP18.42■□□□□ 0.54
REG4-201ENST00000256585 CUL7Q14999 1698 aa18.39■□□□□ 0.53
REG4-201ENST00000256585 OSCARQ8IYS5 282 aa18.38■□□□□ 0.53
REG4-201ENST00000256585 CARMIL1Q5VZK9 1371 aa18.37■□□□□ 0.53
REG4-201ENST00000256585 EEA1Q15075 1411 aa18.36■□□□□ 0.53
REG4-201ENST00000256585 GRIN2AQ12879 1464 aa18.35■□□□□ 0.53
REG4-201ENST00000256585 CSRNP3Q8WYN3 585 aa18.33■□□□□ 0.53
REG4-201ENST00000256585 RAPGEF2Q9Y4G8 1499 aa18.28■□□□□ 0.52
REG4-201ENST00000256585 PRXQ9BXM0 1461 aa18.24■□□□□ 0.51
REG4-201ENST00000256585 CEP170Q5SW79 1584 aa18.24■□□□□ 0.51
REG4-201ENST00000256585 NUP160Q12769 1436 aa18.24■□□□□ 0.51
REG4-201ENST00000256585 DNAJC5Q9H3Z4 198 aa18.22■□□□□ 0.51
REG4-201ENST00000256585 EHMT2Q96KQ7 1210 aa18.2■□□□□ 0.5
REG4-201ENST00000256585 CLASP1Q7Z460 1538 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms