RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 NISCHQ9Y2I1 1504 aa25.22■■□□□ 1.63
TNFAIP1-201ENST00000226225 DCAF8L2P0C7V8 631 aa22.02■■□□□ 1.12
TNFAIP1-201ENST00000226225 CCDC180Q9P1Z9 1646 aa21.6■■□□□ 1.05
TNFAIP1-201ENST00000226225 SHROOM4Q9ULL8 1493 aa21.4■■□□□ 1.02
TNFAIP1-201ENST00000226225 ABCC9O60706 1549 aa21.27■■□□□ 1
TNFAIP1-201ENST00000226225 ZCCHC6Q5VYS8 1495 aaKnown RBP21.08■□□□□ 0.97
TNFAIP1-201ENST00000226225 SUPT5HO00267 1087 aaKnown RBP20.72■□□□□ 0.91
TNFAIP1-201ENST00000226225 DCAF1Q9Y4B6 1507 aa20.52■□□□□ 0.87
TNFAIP1-201ENST00000226225 SCRIBQ14160 1630 aa20.42■□□□□ 0.86
TNFAIP1-201ENST00000226225 NACADO15069 1562 aa20.38■□□□□ 0.85
TNFAIP1-201ENST00000226225 PABPN1Q86U42 306 aaKnown RBP eCLIP20.35■□□□□ 0.85
TNFAIP1-201ENST00000226225 RB1CC1Q8TDY2 1594 aa20.31■□□□□ 0.84
TNFAIP1-201ENST00000226225 MYO15BQ96JP2 1530 aa20.23■□□□□ 0.83
TNFAIP1-201ENST00000226225 CECR2Q9BXF3 1484 aa19.82■□□□□ 0.76
TNFAIP1-201ENST00000226225 RSF1Q96T23 1441 aaPredicted RBP19.72■□□□□ 0.75
TNFAIP1-201ENST00000226225 MROH2BQ7Z745 1585 aa19.59■□□□□ 0.73
TNFAIP1-201ENST00000226225 UNC13AQ9UPW8 1703 aa19.56■□□□□ 0.72
TNFAIP1-201ENST00000226225 BICRAQ9NZM4 1560 aa19.54■□□□□ 0.72
TNFAIP1-201ENST00000226225 BAZ1AQ9NRL2 1556 aaPredicted RBP19.48■□□□□ 0.71
TNFAIP1-201ENST00000226225 CHIC1Q5VXU3 224 aa19.42■□□□□ 0.7
TNFAIP1-201ENST00000226225 WIZO95785 1651 aa19.38■□□□□ 0.69
TNFAIP1-201ENST00000226225 SMARCA4P51532 1647 aa19.32■□□□□ 0.68
TNFAIP1-201ENST00000226225 TRIM41Q8WV44 630 aa19.3■□□□□ 0.68
TNFAIP1-201ENST00000226225 FAM9AQ8IZU1 332 aaPredicted RBP19.26■□□□□ 0.67
TNFAIP1-201ENST00000226225 EHMT2Q96KQ7 1210 aa19.25■□□□□ 0.67
TNFAIP1-201ENST00000226225 BAZ1BQ9UIG0 1483 aaKnown RBP19.18■□□□□ 0.66
TNFAIP1-201ENST00000226225 ATAD2BQ9ULI0 1458 aa19.17■□□□□ 0.66
TNFAIP1-201ENST00000226225 EIF4G1Q04637 1599 aaKnown RBP19.13■□□□□ 0.65
TNFAIP1-201ENST00000226225 CCDC88BA6NC98 1476 aa19.09■□□□□ 0.65
TNFAIP1-201ENST00000226225 TOP2AP11388 1531 aaKnown RBP19.07■□□□□ 0.64
TNFAIP1-201ENST00000226225 SMARCA2P51531 1590 aa19.06■□□□□ 0.64
TNFAIP1-201ENST00000226225 PCGF6Q9BYE7 350 aa19■□□□□ 0.63
TNFAIP1-201ENST00000226225 PPARGC1BQ86YN6 1023 aaKnown RBP18.99■□□□□ 0.63
TNFAIP1-201ENST00000226225 HRCP23327 699 aa18.98■□□□□ 0.63
TNFAIP1-201ENST00000226225 LOC105371045A0A1W2PR82 267 aa18.95■□□□□ 0.62
TNFAIP1-201ENST00000226225 NCAPD3P42695 1498 aa18.91■□□□□ 0.62
TNFAIP1-201ENST00000226225 CC2D2AQ9P2K1 1620 aa18.88■□□□□ 0.61
TNFAIP1-201ENST00000226225 DNAJC5BQ9UF47 199 aa18.88■□□□□ 0.61
TNFAIP1-201ENST00000226225 PEG3Q9GZU2 1588 aa18.83■□□□□ 0.6
TNFAIP1-201ENST00000226225 ABCC8Q09428 1581 aa18.76■□□□□ 0.59
TNFAIP1-201ENST00000226225 HMGXB3Q12766 1538 aa18.72■□□□□ 0.59
TNFAIP1-201ENST00000226225 WRNQ14191 1432 aaPredicted RBP eCLIP18.68■□□□□ 0.58
TNFAIP1-201ENST00000226225 CADPSQ9ULU8 1353 aa18.65■□□□□ 0.58
TNFAIP1-201ENST00000226225 RANGAP1P46060 587 aaPredicted RBP18.65■□□□□ 0.58
TNFAIP1-201ENST00000226225 UBTFP17480 764 aaKnown RBP18.63■□□□□ 0.57
TNFAIP1-201ENST00000226225 NESP48681 1621 aa18.55■□□□□ 0.56
TNFAIP1-201ENST00000226225 CSRNP3Q8WYN3 585 aa18.53■□□□□ 0.56
TNFAIP1-201ENST00000226225 CFTRP13569 1480 aa18.52■□□□□ 0.56
TNFAIP1-201ENST00000226225 SOGA1O94964 1423 aa18.51■□□□□ 0.55
TNFAIP1-201ENST00000226225 FANCD2Q9BXW9 1451 aa18.43■□□□□ 0.54
TNFAIP1-201ENST00000226225 RUSC2Q8N2Y8 1516 aa18.39■□□□□ 0.54
TNFAIP1-201ENST00000226225 PDS5BQ9NTI5 1447 aa18.38■□□□□ 0.53
TNFAIP1-201ENST00000226225 TTBK1Q5TCY1 1321 aaPredicted RBP18.37■□□□□ 0.53
TNFAIP1-201ENST00000226225 SYNJ1O43426 1573 aa18.37■□□□□ 0.53
TNFAIP1-201ENST00000226225 ERCC6Q03468 1493 aa18.31■□□□□ 0.52
TNFAIP1-201ENST00000226225 CEP164Q9UPV0 1460 aa18.31■□□□□ 0.52
TNFAIP1-201ENST00000226225 CUX1P39880 1505 aa18.27■□□□□ 0.52
TNFAIP1-201ENST00000226225 CUX2O14529 1486 aa18.24■□□□□ 0.51
TNFAIP1-201ENST00000226225 EEA1Q15075 1411 aa18.23■□□□□ 0.51
TNFAIP1-201ENST00000226225 KIF27Q86VH2 1401 aa18.23■□□□□ 0.51
TNFAIP1-201ENST00000226225 FGD5Q6ZNL6 1462 aa18.21■□□□□ 0.5
TNFAIP1-201ENST00000226225 TDRD9Q8NDG6 1382 aaKnown RBP18.2■□□□□ 0.5
TNFAIP1-201ENST00000226225 LAMC3Q9Y6N6 1575 aa18.19■□□□□ 0.5
TNFAIP1-201ENST00000226225 RAD54L2Q9Y4B4 1467 aa18.19■□□□□ 0.5
TNFAIP1-201ENST00000226225 TOP2BQ02880 1626 aa18.18■□□□□ 0.5
TNFAIP1-201ENST00000226225 FBLN2P98095 1184 aa18.15■□□□□ 0.5
TNFAIP1-201ENST00000226225 ATP1B4Q9UN42 357 aaPredicted RBP18.13■□□□□ 0.49
TNFAIP1-201ENST00000226225 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
TNFAIP1-201ENST00000226225 APLP2Q06481 763 aa18.12■□□□□ 0.49
TNFAIP1-201ENST00000226225 GOLGA3Q08378 1498 aa18.1■□□□□ 0.49
TNFAIP1-201ENST00000226225 P3H3Q8IVL6 736 aa18.09■□□□□ 0.49
TNFAIP1-201ENST00000226225 TRIM26Q12899 539 aaPredicted RBP18.09■□□□□ 0.49
TNFAIP1-201ENST00000226225 URB2Q14146 1524 aaKnown RBP18.08■□□□□ 0.48
TNFAIP1-201ENST00000226225 POLA1P09884 1462 aaPredicted RBP18.07■□□□□ 0.48
TNFAIP1-201ENST00000226225 RAPGEF2Q9Y4G8 1499 aa18.06■□□□□ 0.48
TNFAIP1-201ENST00000226225 CARMIL1Q5VZK9 1371 aa18.06■□□□□ 0.48
TNFAIP1-201ENST00000226225 CEP162Q5TB80 1403 aa18.04■□□□□ 0.48
TNFAIP1-201ENST00000226225 TNIKQ9UKE5 1360 aa18.04■□□□□ 0.48
TNFAIP1-201ENST00000226225 IGF1RP08069 1367 aa18.04■□□□□ 0.48
TNFAIP1-201ENST00000226225 DNMBPQ6XZF7 1577 aa18.03■□□□□ 0.48
TNFAIP1-201ENST00000226225 SCAF1Q9H7N4 1312 aaKnown RBP18.02■□□□□ 0.48
TNFAIP1-201ENST00000226225 BIVM-ERCC5R4GMW8 1640 aa18.01■□□□□ 0.47
TNFAIP1-201ENST00000226225 MRC2Q9UBG0 1479 aa18■□□□□ 0.47
TNFAIP1-201ENST00000226225 CLIP1P30622 1438 aa17.97■□□□□ 0.47
TNFAIP1-201ENST00000226225 AQRO60306 1485 aaKnown RBP eCLIP17.97■□□□□ 0.471e-11■■■■□ 24.7
TNFAIP1-201ENST00000226225 KIF21AQ7Z4S6 1674 aa17.97■□□□□ 0.47
TNFAIP1-201ENST00000226225 CHMP7Q8WUX9 453 aaPredicted RBP17.93■□□□□ 0.46
TNFAIP1-201ENST00000226225 PRDM2Q13029 1718 aa17.92■□□□□ 0.46
TNFAIP1-201ENST00000226225 PELP1Q8IZL8 1130 aaKnown RBP17.92■□□□□ 0.46
TNFAIP1-201ENST00000226225 GAPVD1Q14C86 1478 aa17.91■□□□□ 0.46
TNFAIP1-201ENST00000226225 ABCA10Q8WWZ4 1543 aa17.87■□□□□ 0.45
TNFAIP1-201ENST00000226225 PRXQ9BXM0 1461 aa17.87■□□□□ 0.45
TNFAIP1-201ENST00000226225 ZNF608Q9ULD9 1512 aaPredicted RBP17.82■□□□□ 0.44
TNFAIP1-201ENST00000226225 ARID3CA6NKF2 412 aa17.82■□□□□ 0.44
TNFAIP1-201ENST00000226225 KIF21BO75037 1637 aa17.79■□□□□ 0.44
TNFAIP1-201ENST00000226225 IFT140Q96RY7 1462 aa17.78■□□□□ 0.44
TNFAIP1-201ENST00000226225 ZEB1P37275 1124 aaPredicted RBP17.77■□□□□ 0.44
TNFAIP1-201ENST00000226225 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.76■□□□□ 0.43
TNFAIP1-201ENST00000226225 HNRNPUL2Q1KMD3 747 aaKnown RBP17.76■□□□□ 0.43
TNFAIP1-201ENST00000226225 GRIN2BQ13224 1484 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms