RNA–Protein interactions for RNA: ENST00000216200.9

PVALB-201, Transcript of parvalbumin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PVALB, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVALB-201ENST00000216200 NISCHQ9Y2I1 1504 aa17.69■□□□□ 0.42
PVALB-201ENST00000216200 CCDC180Q9P1Z9 1646 aa15.33■□□□□ 0.04
PVALB-201ENST00000216200 ZCCHC6Q5VYS8 1495 aaKnown RBP14.86□□□□□ -0.03
PVALB-201ENST00000216200 DCAF1Q9Y4B6 1507 aa14.82□□□□□ -0.04
PVALB-201ENST00000216200 MYO15BQ96JP2 1530 aa14.66□□□□□ -0.06
PVALB-201ENST00000216200 DCAF8L2P0C7V8 631 aa14.35□□□□□ -0.11
PVALB-201ENST00000216200 NACADO15069 1562 aa14.34□□□□□ -0.11
PVALB-201ENST00000216200 SHROOM4Q9ULL8 1493 aa14.18□□□□□ -0.14
PVALB-201ENST00000216200 ABCC9O60706 1549 aa14.15□□□□□ -0.14
PVALB-201ENST00000216200 RB1CC1Q8TDY2 1594 aa14.08□□□□□ -0.16
PVALB-201ENST00000216200 SUPT5HO00267 1087 aaKnown RBP13.87□□□□□ -0.19
PVALB-201ENST00000216200 SCRIBQ14160 1630 aa13.86□□□□□ -0.19
PVALB-201ENST00000216200 AEBP2Q6ZN18 517 aaPredicted RBP13.82□□□□□ -0.2
PVALB-201ENST00000216200 RSF1Q96T23 1441 aaPredicted RBP13.79□□□□□ -0.2
PVALB-201ENST00000216200 BAZ1AQ9NRL2 1556 aaPredicted RBP13.65□□□□□ -0.22
PVALB-201ENST00000216200 CECR2Q9BXF3 1484 aa13.61□□□□□ -0.23
PVALB-201ENST00000216200 BICRAQ9NZM4 1560 aa13.58□□□□□ -0.23
PVALB-201ENST00000216200 MROH2BQ7Z745 1585 aa13.56□□□□□ -0.24
PVALB-201ENST00000216200 UNC13AQ9UPW8 1703 aa13.56□□□□□ -0.24
PVALB-201ENST00000216200 CHIC1Q5VXU3 224 aa13.55□□□□□ -0.24
PVALB-201ENST00000216200 PEG3Q9GZU2 1588 aa13.48□□□□□ -0.25
PVALB-201ENST00000216200 SMARCA4P51532 1647 aa13.46□□□□□ -0.25
PVALB-201ENST00000216200 PABPN1Q86U42 306 aaKnown RBP eCLIP13.41□□□□□ -0.26
PVALB-201ENST00000216200 TOP2AP11388 1531 aaKnown RBP13.38□□□□□ -0.27
PVALB-201ENST00000216200 WIZO95785 1651 aa13.36□□□□□ -0.27
PVALB-201ENST00000216200 SMARCA2P51531 1590 aa13.32□□□□□ -0.28
PVALB-201ENST00000216200 ATAD2BQ9ULI0 1458 aa13.29□□□□□ -0.28
PVALB-201ENST00000216200 NCAPD3P42695 1498 aa13.29□□□□□ -0.28
PVALB-201ENST00000216200 CCDC88BA6NC98 1476 aa13.26□□□□□ -0.29
PVALB-201ENST00000216200 TRIM41Q8WV44 630 aa13.2□□□□□ -0.3
PVALB-201ENST00000216200 HMGXB3Q12766 1538 aa13.18□□□□□ -0.3
PVALB-201ENST00000216200 BAZ1BQ9UIG0 1483 aaKnown RBP13.16□□□□□ -0.3
PVALB-201ENST00000216200 EIF4G1Q04637 1599 aaKnown RBP13.15□□□□□ -0.3
PVALB-201ENST00000216200 EEA1Q15075 1411 aa13.02□□□□□ -0.33
PVALB-201ENST00000216200 CFTRP13569 1480 aa12.97□□□□□ -0.33
PVALB-201ENST00000216200 WRNQ14191 1432 aaPredicted RBP eCLIP12.95□□□□□ -0.34
PVALB-201ENST00000216200 CADPSQ9ULU8 1353 aa12.91□□□□□ -0.34
PVALB-201ENST00000216200 LOC105371045A0A1W2PR82 267 aa12.89□□□□□ -0.35
PVALB-201ENST00000216200 CC2D2AQ9P2K1 1620 aa12.87□□□□□ -0.35
PVALB-201ENST00000216200 CSRNP3Q8WYN3 585 aa12.86□□□□□ -0.35
PVALB-201ENST00000216200 ABCC8Q09428 1581 aa12.81□□□□□ -0.36
PVALB-201ENST00000216200 TOP2BQ02880 1626 aa12.8□□□□□ -0.36
PVALB-201ENST00000216200 TNIKQ9UKE5 1360 aa12.77□□□□□ -0.37
PVALB-201ENST00000216200 BIVM-ERCC5R4GMW8 1640 aa12.76□□□□□ -0.37
PVALB-201ENST00000216200 SOGA1O94964 1423 aa12.74□□□□□ -0.37
PVALB-201ENST00000216200 SYNJ1O43426 1573 aa12.73□□□□□ -0.37
PVALB-201ENST00000216200 FAM9AQ8IZU1 332 aaPredicted RBP12.71□□□□□ -0.37
PVALB-201ENST00000216200 PRDM2Q13029 1718 aa12.7□□□□□ -0.38
PVALB-201ENST00000216200 LAMC3Q9Y6N6 1575 aa12.69□□□□□ -0.38
PVALB-201ENST00000216200 CEP164Q9UPV0 1460 aa12.69□□□□□ -0.38
PVALB-201ENST00000216200 CUX1P39880 1505 aa12.67□□□□□ -0.38
PVALB-201ENST00000216200 KIF27Q86VH2 1401 aa12.66□□□□□ -0.38
PVALB-201ENST00000216200 PDS5BQ9NTI5 1447 aa12.66□□□□□ -0.38
PVALB-201ENST00000216200 GOLGA3Q08378 1498 aa12.65□□□□□ -0.38
PVALB-201ENST00000216200 KIF21BO75037 1637 aa12.65□□□□□ -0.38
PVALB-201ENST00000216200 TRIM26Q12899 539 aaPredicted RBP12.64□□□□□ -0.39
PVALB-201ENST00000216200 FANCD2Q9BXW9 1451 aa12.64□□□□□ -0.39
PVALB-201ENST00000216200 PRXQ9BXM0 1461 aa12.63□□□□□ -0.39
PVALB-201ENST00000216200 RUSC2Q8N2Y8 1516 aa12.62□□□□□ -0.39
PVALB-201ENST00000216200 ERICH3Q5RHP9 1530 aa12.61□□□□□ -0.39
PVALB-201ENST00000216200 IGF1RP08069 1367 aa12.57□□□□□ -0.4
PVALB-201ENST00000216200 UBTFP17480 764 aaKnown RBP12.56□□□□□ -0.4
PVALB-201ENST00000216200 DNMBPQ6XZF7 1577 aa12.56□□□□□ -0.4
PVALB-201ENST00000216200 CEP162Q5TB80 1403 aa12.54□□□□□ -0.4
PVALB-201ENST00000216200 DNAJC5BQ9UF47 199 aa12.54□□□□□ -0.4
PVALB-201ENST00000216200 ABCA10Q8WWZ4 1543 aa12.52□□□□□ -0.4
PVALB-201ENST00000216200 TOPBP1Q92547 1522 aa12.51□□□□□ -0.41
PVALB-201ENST00000216200 FGD5Q6ZNL6 1462 aa12.5□□□□□ -0.41
PVALB-201ENST00000216200 RAPGEF2Q9Y4G8 1499 aa12.48□□□□□ -0.41
PVALB-201ENST00000216200 CARMIL1Q5VZK9 1371 aa12.47□□□□□ -0.41
PVALB-201ENST00000216200 NESP48681 1621 aa12.47□□□□□ -0.41
PVALB-201ENST00000216200 PCGF6Q9BYE7 350 aa12.46□□□□□ -0.41
PVALB-201ENST00000216200 CUX2O14529 1486 aa12.46□□□□□ -0.42
PVALB-201ENST00000216200 POLA1P09884 1462 aaPredicted RBP12.46□□□□□ -0.42
PVALB-201ENST00000216200 CLIP1P30622 1438 aa12.45□□□□□ -0.42
PVALB-201ENST00000216200 URB2Q14146 1524 aaKnown RBP12.43□□□□□ -0.42
PVALB-201ENST00000216200 VPS8Q8N3P4 1428 aa12.4□□□□□ -0.42
PVALB-201ENST00000216200 WDR97A6NE52 1622 aa12.38□□□□□ -0.43
PVALB-201ENST00000216200 MRC2Q9UBG0 1479 aa12.38□□□□□ -0.43
PVALB-201ENST00000216200 HRCP23327 699 aa12.36□□□□□ -0.43
PVALB-201ENST00000216200 ZEB1P37275 1124 aaPredicted RBP12.35□□□□□ -0.43
PVALB-201ENST00000216200 CUL7Q14999 1698 aa12.34□□□□□ -0.43
PVALB-201ENST00000216200 RAD54L2Q9Y4B4 1467 aa12.34□□□□□ -0.43
PVALB-201ENST00000216200 MAP3K1Q13233 1512 aa12.33□□□□□ -0.44
PVALB-201ENST00000216200 GAPVD1Q14C86 1478 aa12.33□□□□□ -0.44
PVALB-201ENST00000216200 EHMT2Q96KQ7 1210 aa12.32□□□□□ -0.44
PVALB-201ENST00000216200 IFT140Q96RY7 1462 aa12.32□□□□□ -0.44
PVALB-201ENST00000216200 APLP2Q06481 763 aa12.31□□□□□ -0.44
PVALB-201ENST00000216200 WDR62O43379 1518 aa12.31□□□□□ -0.44
PVALB-201ENST00000216200 TARBP1Q13395 1621 aaKnown RBP12.3□□□□□ -0.44
PVALB-201ENST00000216200 ABCA5Q8WWZ7 1642 aa12.29□□□□□ -0.44
PVALB-201ENST00000216200 FHAD1B1AJZ9 1412 aa12.27□□□□□ -0.45
PVALB-201ENST00000216200 KIF21AQ7Z4S6 1674 aa12.26□□□□□ -0.45
PVALB-201ENST00000216200 TDRD9Q8NDG6 1382 aaKnown RBP12.26□□□□□ -0.45
PVALB-201ENST00000216200 ARHGAP35Q9NRY4 1499 aa12.26□□□□□ -0.45
PVALB-201ENST00000216200 AQRO60306 1485 aaKnown RBP eCLIP12.25□□□□□ -0.45
PVALB-201ENST00000216200 EFCAB5A4FU69 1503 aa12.24□□□□□ -0.45
PVALB-201ENST00000216200 GRIN2BQ13224 1484 aa12.24□□□□□ -0.45
PVALB-201ENST00000216200 ARAP1Q96P48 1450 aa12.24□□□□□ -0.45
PVALB-201ENST00000216200 FMN1Q68DA7 1419 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms