RNA–Protein interactions for RNA: ENSMUST00000189979.1

Gm28109-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28109, Length 2,167 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28109-201ENSMUST00000189979 Chic1Q8CBW7 227 aa17.25■□□□□ 0.35
Gm28109-201ENSMUST00000189979 Mapk8ip2Q9ERE9 830 aa16.91■□□□□ 0.3
Gm28109-201ENSMUST00000189979 Phf23Q8BSN5 401 aa15.63■□□□□ 0.09
Gm28109-201ENSMUST00000189979 Plppr3Q7TPB0 716 aa14.95□□□□□ -0.02
Gm28109-201ENSMUST00000189979 Gab3Q8BSM5 595 aa14.84□□□□□ -0.03
Gm28109-201ENSMUST00000189979 Senp3Q9EP97 568 aaKnown RBP14.27□□□□□ -0.13
Gm28109-201ENSMUST00000189979 Kcna4Q61423 654 aa13.73□□□□□ -0.21
Gm28109-201ENSMUST00000189979 Rpgrip1Q9EPQ2 1331 aa13.56□□□□□ -0.24
Gm28109-201ENSMUST00000189979 Gm35339A0A140LHH9 1649 aa13.27□□□□□ -0.28
Gm28109-201ENSMUST00000189979 NischQ80TM9 1593 aa13.22□□□□□ -0.29
Gm28109-201ENSMUST00000189979 Rtl1Q7M732 1744 aa13.21□□□□□ -0.29
Gm28109-201ENSMUST00000189979 Ccdc180J3QNE4 1664 aa13.01□□□□□ -0.33
Gm28109-201ENSMUST00000189979 Acin1Q9JIX8 1338 aaKnown RBP12.86□□□□□ -0.35
Gm28109-201ENSMUST00000189979 Abcc9P70170 1546 aa12.83□□□□□ -0.36
Gm28109-201ENSMUST00000189979 Abcc8B2RUS7 1588 aa12.69□□□□□ -0.38
Gm28109-201ENSMUST00000189979 Pcgf6Q99NA9 353 aa12.63□□□□□ -0.39
Gm28109-201ENSMUST00000189979 Hoxd11P23813 323 aa12.57□□□□□ -0.4
Gm28109-201ENSMUST00000189979 Fam163aQ8CAA5 168 aa12.51□□□□□ -0.41
Gm28109-201ENSMUST00000189979 Trap1aP19473 224 aa12.49□□□□□ -0.41
Gm28109-201ENSMUST00000189979 Rhox8Q6VSS7 320 aa12.47□□□□□ -0.41
Gm28109-201ENSMUST00000189979 Dcaf1Q80TR8 1506 aa12.42□□□□□ -0.42
Gm28109-201ENSMUST00000189979 Las1lA2BE28 776 aaKnown RBP12.41□□□□□ -0.42
Gm28109-201ENSMUST00000189979 Ube2uB1AUC4 352 aa12.35□□□□□ -0.43
Gm28109-201ENSMUST00000189979 Myt1Q8CFC2 1127 aa12.3□□□□□ -0.44
Gm28109-201ENSMUST00000189979 Zcchc6Q5BLK4 1491 aaKnown RBP12.3□□□□□ -0.44
Gm28109-201ENSMUST00000189979 Trim41Q5NCC3 630 aa12.26□□□□□ -0.45
Gm28109-201ENSMUST00000189979 Dmrt2Q8BG36 561 aa12.22□□□□□ -0.45
Gm28109-201ENSMUST00000189979 HrcG5E8J6 738 aa12.18□□□□□ -0.46
Gm28109-201ENSMUST00000189979 Neurod1Q60867 357 aa12.16□□□□□ -0.46
Gm28109-201ENSMUST00000189979 Supt5hO55201 1082 aaKnown RBP12.15□□□□□ -0.47
Gm28109-201ENSMUST00000189979 Ehmt2Q9Z148 1263 aaKnown RBP12.14□□□□□ -0.47
Gm28109-201ENSMUST00000189979 ScribQ80U72 1612 aa12.11□□□□□ -0.47
Gm28109-201ENSMUST00000189979 CenpbP27790 599 aa12.09□□□□□ -0.47
Gm28109-201ENSMUST00000189979 Znf219Q6IQX8 726 aa12.02□□□□□ -0.49
Gm28109-201ENSMUST00000189979 Ppargc1bQ8VHJ7 1014 aa12.02□□□□□ -0.49
Gm28109-201ENSMUST00000189979 Cngb1E1AZ71 1325 aa11.96□□□□□ -0.49
Gm28109-201ENSMUST00000189979 1700123L14RikQ3V2K7 440 aa11.93□□□□□ -0.5
Gm28109-201ENSMUST00000189979 Anks4bQ8K3X6 423 aa11.92□□□□□ -0.5
Gm28109-201ENSMUST00000189979 DiexfQ8BTT6 772 aaKnown RBP11.84□□□□□ -0.51
Gm28109-201ENSMUST00000189979 Chrna2Q91X60 512 aa11.84□□□□□ -0.51
Gm28109-201ENSMUST00000189979 Aplp2Q06335 707 aa11.83□□□□□ -0.52
Gm28109-201ENSMUST00000189979 NefmP08553 848 aa11.8□□□□□ -0.52
Gm28109-201ENSMUST00000189979 Kdm5dQ62240 1548 aa11.76□□□□□ -0.53
Gm28109-201ENSMUST00000189979 Csrnp3P59055 597 aa11.75□□□□□ -0.53
Gm28109-201ENSMUST00000189979 Rsph4aQ8BYM7 716 aa11.74□□□□□ -0.53
Gm28109-201ENSMUST00000189979 Atf5O70191 283 aa11.72□□□□□ -0.53
Gm28109-201ENSMUST00000189979 NacadQ5SWP3 1504 aa11.71□□□□□ -0.54
Gm28109-201ENSMUST00000189979 Zeb1Q64318 1117 aa11.71□□□□□ -0.54
Gm28109-201ENSMUST00000189979 Rimbp2Q80U40 1072 aa11.67□□□□□ -0.54
Gm28109-201ENSMUST00000189979 Sall2Q9QX96 1004 aa11.65□□□□□ -0.54
Gm28109-201ENSMUST00000189979 Cep164Q5DU05 1446 aa11.64□□□□□ -0.55
Gm28109-201ENSMUST00000189979 Bcl11aQ9QYE3 773 aa11.61□□□□□ -0.55
Gm28109-201ENSMUST00000189979 Slc4a1apE9PX68 744 aa11.58□□□□□ -0.56
Gm28109-201ENSMUST00000189979 Cdk11bP24788 784 aaKnown RBP11.58□□□□□ -0.56
Gm28109-201ENSMUST00000189979 Rb1cc1Q9ESK9 1588 aa11.56□□□□□ -0.56
Gm28109-201ENSMUST00000189979 Dnajc5bQ9CQ94 199 aa11.51□□□□□ -0.57
Gm28109-201ENSMUST00000189979 Nop58Q6DFW4 536 aaKnown RBP11.5□□□□□ -0.57
Gm28109-201ENSMUST00000189979 ArsiQ32KI9 573 aa11.48□□□□□ -0.57
Gm28109-201ENSMUST00000189979 Sycp2Q9CUU3 1500 aa11.47□□□□□ -0.57
Gm28109-201ENSMUST00000189979 Mier1Q5UAK0 511 aa11.44□□□□□ -0.58
Gm28109-201ENSMUST00000189979 ClspnQ80YR7 1315 aa11.43□□□□□ -0.58
Gm28109-201ENSMUST00000189979 Ccdc136Q3TVA9 1136 aa11.43□□□□□ -0.58
Gm28109-201ENSMUST00000189979 Ppp4r2Q0VGB7 417 aa11.41□□□□□ -0.58
Gm28109-201ENSMUST00000189979 Hs6st3Q9QYK4 470 aa11.41□□□□□ -0.58
Gm28109-201ENSMUST00000189979 Baz1aO88379 1555 aa11.4□□□□□ -0.58
Gm28109-201ENSMUST00000189979 Wdr66E9Q743 1299 aa11.38□□□□□ -0.59
Gm28109-201ENSMUST00000189979 Akt1s1Q9D1F4 257 aa11.38□□□□□ -0.59
Gm28109-201ENSMUST00000189979 Tnnt3Q9QZ47 272 aa11.33□□□□□ -0.6
Gm28109-201ENSMUST00000189979 Rtl5Q5DTT4 599 aa11.32□□□□□ -0.6
Gm28109-201ENSMUST00000189979 BicraF8VPZ9 1578 aa11.29□□□□□ -0.6
Gm28109-201ENSMUST00000189979 Fam71e1A1L3C1 212 aa11.29□□□□□ -0.6
Gm28109-201ENSMUST00000189979 Crybg2B7ZCC2 1516 aa11.27□□□□□ -0.6
Gm28109-201ENSMUST00000189979 Amer1Q7TS75 1132 aa11.26□□□□□ -0.61
Gm28109-201ENSMUST00000189979 Aebp2Q9Z248 504 aaKnown RBP11.26□□□□□ -0.61
Gm28109-201ENSMUST00000189979 Gm38655A0A286YDK6 273 aa11.25□□□□□ -0.61
Gm28109-201ENSMUST00000189979 Pelp1Q9DBD5 1123 aaKnown RBP11.21□□□□□ -0.62
Gm28109-201ENSMUST00000189979 PrkcshO08795 521 aa11.18□□□□□ -0.62
Gm28109-201ENSMUST00000189979 Anp32aO35381 247 aa11.16□□□□□ -0.62
Gm28109-201ENSMUST00000189979 Slc34a2Q9DBP0 697 aa11.14□□□□□ -0.63
Gm28109-201ENSMUST00000189979 Bach1P97302 739 aa11.13□□□□□ -0.63
Gm28109-201ENSMUST00000189979 Rsf1E9PWW9 1441 aaKnown RBP11.12□□□□□ -0.63
Gm28109-201ENSMUST00000189979 TonslQ6NZL6 1363 aa11.12□□□□□ -0.63
Gm28109-201ENSMUST00000189979 Smarca2Q6DIC0 1577 aa11.11□□□□□ -0.63
Gm28109-201ENSMUST00000189979 Hnrnpul2Q00PI9 745 aaKnown RBP11.07□□□□□ -0.64
Gm28109-201ENSMUST00000189979 SafbD3YXK2 937 aaKnown RBP11.04□□□□□ -0.64
Gm28109-201ENSMUST00000189979 Stra8P70278 393 aa11.03□□□□□ -0.64
Gm28109-201ENSMUST00000189979 Ifnlr1Q8CGK5 535 aa11.01□□□□□ -0.65
Gm28109-201ENSMUST00000189979 UbtfP25976 765 aaKnown RBP10.99□□□□□ -0.65
Gm28109-201ENSMUST00000189979 Cecr2E9Q2Z1 1453 aa10.95□□□□□ -0.66
Gm28109-201ENSMUST00000189979 Ccdc88bQ4QRL3 1481 aa10.94□□□□□ -0.66
Gm28109-201ENSMUST00000189979 Ccdc9Q8VC31 543 aaKnown RBP10.93□□□□□ -0.66
Gm28109-201ENSMUST00000189979 Golga3P55937 1487 aa10.91□□□□□ -0.66
Gm28109-201ENSMUST00000189979 Hdac5Q9Z2V6 1113 aa10.9□□□□□ -0.66
Gm28109-201ENSMUST00000189979 Smarca4Q3TKT4 1613 aaKnown RBP10.88□□□□□ -0.67
Gm28109-201ENSMUST00000189979 Brd4Q9ESU6 1400 aaKnown RBP10.87□□□□□ -0.67
Gm28109-201ENSMUST00000189979 Pds5bQ4VA53 1446 aaKnown RBP10.87□□□□□ -0.67
Gm28109-201ENSMUST00000189979 Znf710Q3U288 666 aa10.86□□□□□ -0.67
Gm28109-201ENSMUST00000189979 Sox12Q04890 314 aa10.86□□□□□ -0.67
Gm28109-201ENSMUST00000189979 Calr4Q3TQS0 420 aa10.84□□□□□ -0.67
Gm28109-201ENSMUST00000189979 Supt16hQ920B9 1047 aa10.84□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 62.3 ms