RNA–Protein interactions for RNA: ENSMUST00000189579.1

Gm28839-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28839, Length 2,171 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28839-201ENSMUST00000189579 Chic1Q8CBW7 227 aa17.57■□□□□ 0.4
Gm28839-201ENSMUST00000189579 Mapk8ip2Q9ERE9 830 aa17.28■□□□□ 0.36
Gm28839-201ENSMUST00000189579 Phf23Q8BSN5 401 aa15.95■□□□□ 0.14
Gm28839-201ENSMUST00000189579 Plppr3Q7TPB0 716 aa15.22■□□□□ 0.03
Gm28839-201ENSMUST00000189579 Gab3Q8BSM5 595 aa15.12■□□□□ 0.01
Gm28839-201ENSMUST00000189579 NischQ80TM9 1593 aa14.94□□□□□ -0.02
Gm28839-201ENSMUST00000189579 Gm35339A0A140LHH9 1649 aa14.59□□□□□ -0.07
Gm28839-201ENSMUST00000189579 Abcc9P70170 1546 aa14.57□□□□□ -0.08
Gm28839-201ENSMUST00000189579 Senp3Q9EP97 568 aaKnown RBP14.54□□□□□ -0.08
Gm28839-201ENSMUST00000189579 Rtl1Q7M732 1744 aa14.42□□□□□ -0.1
Gm28839-201ENSMUST00000189579 Ccdc180J3QNE4 1664 aa14.2□□□□□ -0.14
Gm28839-201ENSMUST00000189579 Rpgrip1Q9EPQ2 1331 aa14.16□□□□□ -0.14
Gm28839-201ENSMUST00000189579 Abcc8B2RUS7 1588 aa14.12□□□□□ -0.15
Gm28839-201ENSMUST00000189579 Rhox8Q6VSS7 320 aa14.09□□□□□ -0.15
Gm28839-201ENSMUST00000189579 Kcna4Q61423 654 aa13.98□□□□□ -0.17
Gm28839-201ENSMUST00000189579 Zcchc6Q5BLK4 1491 aaKnown RBP13.72□□□□□ -0.21
Gm28839-201ENSMUST00000189579 Acin1Q9JIX8 1338 aaKnown RBP13.67□□□□□ -0.22
Gm28839-201ENSMUST00000189579 HrcG5E8J6 738 aa13.49□□□□□ -0.25
Gm28839-201ENSMUST00000189579 Dcaf1Q80TR8 1506 aa13.47□□□□□ -0.25
Gm28839-201ENSMUST00000189579 Pcgf6Q99NA9 353 aa13.25□□□□□ -0.29
Gm28839-201ENSMUST00000189579 Ehmt2Q9Z148 1263 aaKnown RBP13.15□□□□□ -0.3
Gm28839-201ENSMUST00000189579 Rb1cc1Q9ESK9 1588 aa13.11□□□□□ -0.31
Gm28839-201ENSMUST00000189579 Trim41Q5NCC3 630 aa13.05□□□□□ -0.32
Gm28839-201ENSMUST00000189579 Baz1aO88379 1555 aa13.01□□□□□ -0.33
Gm28839-201ENSMUST00000189579 Ccdc136Q3TVA9 1136 aa13□□□□□ -0.33
Gm28839-201ENSMUST00000189579 Cep164Q5DU05 1446 aa12.94□□□□□ -0.34
Gm28839-201ENSMUST00000189579 ScribQ80U72 1612 aa12.93□□□□□ -0.34
Gm28839-201ENSMUST00000189579 Myt1Q8CFC2 1127 aa12.9□□□□□ -0.34
Gm28839-201ENSMUST00000189579 Supt5hO55201 1082 aaKnown RBP12.88□□□□□ -0.35
Gm28839-201ENSMUST00000189579 Hoxd11P23813 323 aa12.8□□□□□ -0.36
Gm28839-201ENSMUST00000189579 Fam163aQ8CAA5 168 aa12.8□□□□□ -0.36
Gm28839-201ENSMUST00000189579 Crybg2B7ZCC2 1516 aa12.79□□□□□ -0.36
Gm28839-201ENSMUST00000189579 Kdm5dQ62240 1548 aa12.79□□□□□ -0.36
Gm28839-201ENSMUST00000189579 DiexfQ8BTT6 772 aaKnown RBP12.75□□□□□ -0.37
Gm28839-201ENSMUST00000189579 Smarca2Q6DIC0 1577 aa12.75□□□□□ -0.37
Gm28839-201ENSMUST00000189579 Trap1aP19473 224 aa12.73□□□□□ -0.37
Gm28839-201ENSMUST00000189579 Neurod1Q60867 357 aa12.73□□□□□ -0.37
Gm28839-201ENSMUST00000189579 NefmP08553 848 aa12.72□□□□□ -0.37
Gm28839-201ENSMUST00000189579 Las1lA2BE28 776 aaKnown RBP12.7□□□□□ -0.38
Gm28839-201ENSMUST00000189579 NacadQ5SWP3 1504 aa12.69□□□□□ -0.38
Gm28839-201ENSMUST00000189579 Rsf1E9PWW9 1441 aaKnown RBP12.57□□□□□ -0.4
Gm28839-201ENSMUST00000189579 Cngb1E1AZ71 1325 aa12.54□□□□□ -0.4
Gm28839-201ENSMUST00000189579 Zeb1Q64318 1117 aa12.54□□□□□ -0.4
Gm28839-201ENSMUST00000189579 Mier1Q5UAK0 511 aa12.52□□□□□ -0.4
Gm28839-201ENSMUST00000189579 Anks4bQ8K3X6 423 aa12.51□□□□□ -0.41
Gm28839-201ENSMUST00000189579 CenpbP27790 599 aa12.48□□□□□ -0.41
Gm28839-201ENSMUST00000189579 Sall2Q9QX96 1004 aa12.48□□□□□ -0.41
Gm28839-201ENSMUST00000189579 Brd4Q9ESU6 1400 aaKnown RBP12.48□□□□□ -0.41
Gm28839-201ENSMUST00000189579 Golga3P55937 1487 aa12.45□□□□□ -0.42
Gm28839-201ENSMUST00000189579 Dmrt2Q8BG36 561 aa12.44□□□□□ -0.42
Gm28839-201ENSMUST00000189579 Ccdc88bQ4QRL3 1481 aa12.42□□□□□ -0.42
Gm28839-201ENSMUST00000189579 Sycp2Q9CUU3 1500 aa12.39□□□□□ -0.43
Gm28839-201ENSMUST00000189579 1700123L14RikQ3V2K7 440 aa12.37□□□□□ -0.43
Gm28839-201ENSMUST00000189579 Ube2uB1AUC4 352 aa12.35□□□□□ -0.43
Gm28839-201ENSMUST00000189579 Amer1Q7TS75 1132 aa12.33□□□□□ -0.44
Gm28839-201ENSMUST00000189579 Bcl11aQ9QYE3 773 aa12.3□□□□□ -0.44
Gm28839-201ENSMUST00000189579 Aplp2Q06335 707 aa12.29□□□□□ -0.44
Gm28839-201ENSMUST00000189579 Csrnp3P59055 597 aa12.28□□□□□ -0.44
Gm28839-201ENSMUST00000189579 ClspnQ80YR7 1315 aa12.27□□□□□ -0.44
Gm28839-201ENSMUST00000189579 Synj1Q8CHC4 1574 aa12.27□□□□□ -0.45
Gm28839-201ENSMUST00000189579 Cdk11bP24788 784 aaKnown RBP12.26□□□□□ -0.45
Gm28839-201ENSMUST00000189579 Cecr2E9Q2Z1 1453 aa12.26□□□□□ -0.45
Gm28839-201ENSMUST00000189579 Top2bQ64511 1612 aa12.25□□□□□ -0.45
Gm28839-201ENSMUST00000189579 Znf219Q6IQX8 726 aa12.25□□□□□ -0.45
Gm28839-201ENSMUST00000189579 Ppargc1bQ8VHJ7 1014 aa12.24□□□□□ -0.45
Gm28839-201ENSMUST00000189579 CatipB9EKE5 520 aa12.22□□□□□ -0.45
Gm28839-201ENSMUST00000189579 Nop58Q6DFW4 536 aaKnown RBP12.21□□□□□ -0.45
Gm28839-201ENSMUST00000189579 Wdr66E9Q743 1299 aa12.2□□□□□ -0.46
Gm28839-201ENSMUST00000189579 Aebp2Q9Z248 504 aaKnown RBP12.2□□□□□ -0.46
Gm28839-201ENSMUST00000189579 Rapgef2Q8CHG7 1496 aa12.2□□□□□ -0.46
Gm28839-201ENSMUST00000189579 CftrP26361 1476 aa12.19□□□□□ -0.46
Gm28839-201ENSMUST00000189579 UbtfP25976 765 aaKnown RBP12.15□□□□□ -0.47
Gm28839-201ENSMUST00000189579 Cttnbp2B9EJA2 1648 aa12.11□□□□□ -0.47
Gm28839-201ENSMUST00000189579 TonslQ6NZL6 1363 aa12.09□□□□□ -0.47
Gm28839-201ENSMUST00000189579 Esf1Q3V1V3 845 aaKnown RBP12.09□□□□□ -0.47
Gm28839-201ENSMUST00000189579 Fmn1Q05860 1466 aa12.07□□□□□ -0.48
Gm28839-201ENSMUST00000189579 Cep162Q6ZQ06 1403 aa12.06□□□□□ -0.48
Gm28839-201ENSMUST00000189579 Top2aQ01320 1528 aaKnown RBP12.06□□□□□ -0.48
Gm28839-201ENSMUST00000189579 Chrna2Q91X60 512 aa12.06□□□□□ -0.48
Gm28839-201ENSMUST00000189579 Cc2d2aQ8CFW7 1633 aa12.05□□□□□ -0.48
Gm28839-201ENSMUST00000189579 BicraF8VPZ9 1578 aa12.03□□□□□ -0.48
Gm28839-201ENSMUST00000189579 Ncapd3Q6ZQK0 1506 aa11.99□□□□□ -0.49
Gm28839-201ENSMUST00000189579 Rsph4aQ8BYM7 716 aa11.97□□□□□ -0.49
Gm28839-201ENSMUST00000189579 Tnnt3Q9QZ47 272 aa11.95□□□□□ -0.5
Gm28839-201ENSMUST00000189579 Atf5O70191 283 aa11.95□□□□□ -0.5
Gm28839-201ENSMUST00000189579 Eif4g1Q6NZJ6 1600 aaKnown RBP11.94□□□□□ -0.5
Gm28839-201ENSMUST00000189579 Clip1Q922J3 1391 aa11.93□□□□□ -0.5
Gm28839-201ENSMUST00000189579 Smarca4Q3TKT4 1613 aaKnown RBP11.92□□□□□ -0.5
Gm28839-201ENSMUST00000189579 PrkcshO08795 521 aa11.9□□□□□ -0.5
Gm28839-201ENSMUST00000189579 Rimbp2Q80U40 1072 aa11.89□□□□□ -0.51
Gm28839-201ENSMUST00000189579 Myt1lP97500 1187 aa11.89□□□□□ -0.51
Gm28839-201ENSMUST00000189579 Kdm5bQ80Y84 1544 aa11.84□□□□□ -0.51
Gm28839-201ENSMUST00000189579 Npm2Q80W85 207 aa11.82□□□□□ -0.52
Gm28839-201ENSMUST00000189579 Plekhg3Q4VAC9 1341 aa11.82□□□□□ -0.52
Gm28839-201ENSMUST00000189579 Gm38655A0A286YDK6 273 aa11.81□□□□□ -0.52
Gm28839-201ENSMUST00000189579 Ccdc18Q640L5 1455 aa11.79□□□□□ -0.52
Gm28839-201ENSMUST00000189579 Hnrnpul2Q00PI9 745 aaKnown RBP11.78□□□□□ -0.52
Gm28839-201ENSMUST00000189579 Slc4a1apE9PX68 744 aa11.77□□□□□ -0.53
Gm28839-201ENSMUST00000189579 Eea1Q8BL66 1411 aa11.77□□□□□ -0.53
Gm28839-201ENSMUST00000189579 TchhA0A0B4J1F9 1599 aa11.77□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 172.4 ms