RNA–Protein interactions for RNA: ENSMUST00000189366.1

Gm28561-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28561, Length 2,167 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28561-201ENSMUST00000189366 Chic1Q8CBW7 227 aa16.78■□□□□ 0.28
Gm28561-201ENSMUST00000189366 Mapk8ip2Q9ERE9 830 aa16.48■□□□□ 0.23
Gm28561-201ENSMUST00000189366 Phf23Q8BSN5 401 aa15.22■□□□□ 0.03
Gm28561-201ENSMUST00000189366 Plppr3Q7TPB0 716 aa14.56□□□□□ -0.08
Gm28561-201ENSMUST00000189366 Gab3Q8BSM5 595 aa14.45□□□□□ -0.1
Gm28561-201ENSMUST00000189366 Rpgrip1Q9EPQ2 1331 aa14.38□□□□□ -0.11
Gm28561-201ENSMUST00000189366 Rtl1Q7M732 1744 aa14.12□□□□□ -0.15
Gm28561-201ENSMUST00000189366 NischQ80TM9 1593 aa13.98□□□□□ -0.17
Gm28561-201ENSMUST00000189366 Ccdc180J3QNE4 1664 aa13.91□□□□□ -0.18
Gm28561-201ENSMUST00000189366 Senp3Q9EP97 568 aaKnown RBP13.89□□□□□ -0.19
Gm28561-201ENSMUST00000189366 Acin1Q9JIX8 1338 aaKnown RBP13.7□□□□□ -0.22
Gm28561-201ENSMUST00000189366 Abcc9P70170 1546 aa13.64□□□□□ -0.23
Gm28561-201ENSMUST00000189366 Gm35339A0A140LHH9 1649 aa13.54□□□□□ -0.24
Gm28561-201ENSMUST00000189366 Rhox8Q6VSS7 320 aa13.46□□□□□ -0.25
Gm28561-201ENSMUST00000189366 Pcgf6Q99NA9 353 aa13.44□□□□□ -0.26
Gm28561-201ENSMUST00000189366 Kcna4Q61423 654 aa13.37□□□□□ -0.27
Gm28561-201ENSMUST00000189366 Dcaf1Q80TR8 1506 aa13.28□□□□□ -0.28
Gm28561-201ENSMUST00000189366 Zcchc6Q5BLK4 1491 aaKnown RBP13.23□□□□□ -0.29
Gm28561-201ENSMUST00000189366 Las1lA2BE28 776 aaKnown RBP13.13□□□□□ -0.31
Gm28561-201ENSMUST00000189366 Abcc8B2RUS7 1588 aa13.11□□□□□ -0.31
Gm28561-201ENSMUST00000189366 HrcG5E8J6 738 aa13.08□□□□□ -0.32
Gm28561-201ENSMUST00000189366 Trim41Q5NCC3 630 aa13.08□□□□□ -0.32
Gm28561-201ENSMUST00000189366 Ehmt2Q9Z148 1263 aaKnown RBP13.01□□□□□ -0.33
Gm28561-201ENSMUST00000189366 Myt1Q8CFC2 1127 aa12.96□□□□□ -0.33
Gm28561-201ENSMUST00000189366 Supt5hO55201 1082 aaKnown RBP12.96□□□□□ -0.34
Gm28561-201ENSMUST00000189366 Neurod1Q60867 357 aa12.94□□□□□ -0.34
Gm28561-201ENSMUST00000189366 CenpbP27790 599 aa12.76□□□□□ -0.37
Gm28561-201ENSMUST00000189366 Cngb1E1AZ71 1325 aa12.69□□□□□ -0.38
Gm28561-201ENSMUST00000189366 1700123L14RikQ3V2K7 440 aa12.68□□□□□ -0.38
Gm28561-201ENSMUST00000189366 Anks4bQ8K3X6 423 aa12.67□□□□□ -0.38
Gm28561-201ENSMUST00000189366 NefmP08553 848 aa12.61□□□□□ -0.39
Gm28561-201ENSMUST00000189366 Aplp2Q06335 707 aa12.56□□□□□ -0.4
Gm28561-201ENSMUST00000189366 Zeb1Q64318 1117 aa12.51□□□□□ -0.41
Gm28561-201ENSMUST00000189366 Cep164Q5DU05 1446 aa12.51□□□□□ -0.41
Gm28561-201ENSMUST00000189366 Csrnp3P59055 597 aa12.5□□□□□ -0.41
Gm28561-201ENSMUST00000189366 DiexfQ8BTT6 772 aaKnown RBP12.45□□□□□ -0.42
Gm28561-201ENSMUST00000189366 Sall2Q9QX96 1004 aa12.45□□□□□ -0.42
Gm28561-201ENSMUST00000189366 Ccdc136Q3TVA9 1136 aa12.36□□□□□ -0.43
Gm28561-201ENSMUST00000189366 Cdk11bP24788 784 aaKnown RBP12.33□□□□□ -0.44
Gm28561-201ENSMUST00000189366 Rb1cc1Q9ESK9 1588 aa12.31□□□□□ -0.44
Gm28561-201ENSMUST00000189366 Mier1Q5UAK0 511 aa12.27□□□□□ -0.45
Gm28561-201ENSMUST00000189366 Nop58Q6DFW4 536 aaKnown RBP12.26□□□□□ -0.45
Gm28561-201ENSMUST00000189366 Bcl11aQ9QYE3 773 aa12.25□□□□□ -0.45
Gm28561-201ENSMUST00000189366 Fam163aQ8CAA5 168 aa12.22□□□□□ -0.45
Gm28561-201ENSMUST00000189366 Baz1aO88379 1555 aa12.21□□□□□ -0.45
Gm28561-201ENSMUST00000189366 Hoxd11P23813 323 aa12.21□□□□□ -0.45
Gm28561-201ENSMUST00000189366 ClspnQ80YR7 1315 aa12.21□□□□□ -0.46
Gm28561-201ENSMUST00000189366 Trap1aP19473 224 aa12.19□□□□□ -0.46
Gm28561-201ENSMUST00000189366 Wdr66E9Q743 1299 aa12.15□□□□□ -0.46
Gm28561-201ENSMUST00000189366 Aebp2Q9Z248 504 aaKnown RBP12.06□□□□□ -0.48
Gm28561-201ENSMUST00000189366 Tnnt3Q9QZ47 272 aa12.05□□□□□ -0.48
Gm28561-201ENSMUST00000189366 Amer1Q7TS75 1132 aa12.03□□□□□ -0.48
Gm28561-201ENSMUST00000189366 Rsf1E9PWW9 1441 aaKnown RBP12.01□□□□□ -0.49
Gm28561-201ENSMUST00000189366 Fam71e1A1L3C1 212 aa12□□□□□ -0.49
Gm28561-201ENSMUST00000189366 Gm38655A0A286YDK6 273 aa11.99□□□□□ -0.49
Gm28561-201ENSMUST00000189366 Smarca2Q6DIC0 1577 aa11.99□□□□□ -0.49
Gm28561-201ENSMUST00000189366 Rtl5Q5DTT4 599 aa11.98□□□□□ -0.49
Gm28561-201ENSMUST00000189366 ScribQ80U72 1612 aa11.92□□□□□ -0.5
Gm28561-201ENSMUST00000189366 Crybg2B7ZCC2 1516 aa11.91□□□□□ -0.5
Gm28561-201ENSMUST00000189366 TonslQ6NZL6 1363 aa11.9□□□□□ -0.5
Gm28561-201ENSMUST00000189366 Dmrt2Q8BG36 561 aa11.88□□□□□ -0.51
Gm28561-201ENSMUST00000189366 CatipB9EKE5 520 aa11.86□□□□□ -0.51
Gm28561-201ENSMUST00000189366 Anp32aO35381 247 aa11.86□□□□□ -0.51
Gm28561-201ENSMUST00000189366 Pelp1Q9DBD5 1123 aaKnown RBP11.86□□□□□ -0.51
Gm28561-201ENSMUST00000189366 Kdm5dQ62240 1548 aa11.83□□□□□ -0.52
Gm28561-201ENSMUST00000189366 Hnrnpul2Q00PI9 745 aaKnown RBP11.82□□□□□ -0.52
Gm28561-201ENSMUST00000189366 UbtfP25976 765 aaKnown RBP11.81□□□□□ -0.52
Gm28561-201ENSMUST00000189366 Ccdc88bQ4QRL3 1481 aa11.81□□□□□ -0.52
Gm28561-201ENSMUST00000189366 PrkcshO08795 521 aa11.81□□□□□ -0.52
Gm28561-201ENSMUST00000189366 Golga3P55937 1487 aa11.79□□□□□ -0.52
Gm28561-201ENSMUST00000189366 SafbD3YXK2 937 aaKnown RBP11.78□□□□□ -0.52
Gm28561-201ENSMUST00000189366 Ppargc1bQ8VHJ7 1014 aa11.77□□□□□ -0.53
Gm28561-201ENSMUST00000189366 Brd4Q9ESU6 1400 aaKnown RBP11.75□□□□□ -0.53
Gm28561-201ENSMUST00000189366 Stra8P70278 393 aa11.75□□□□□ -0.53
Gm28561-201ENSMUST00000189366 Znf219Q6IQX8 726 aa11.7□□□□□ -0.54
Gm28561-201ENSMUST00000189366 NacadQ5SWP3 1504 aa11.69□□□□□ -0.54
Gm28561-201ENSMUST00000189366 Ifnlr1Q8CGK5 535 aa11.68□□□□□ -0.54
Gm28561-201ENSMUST00000189366 Rapgef2Q8CHG7 1496 aa11.64□□□□□ -0.55
Gm28561-201ENSMUST00000189366 Znf710Q3U288 666 aa11.62□□□□□ -0.55
Gm28561-201ENSMUST00000189366 Ncapd3Q6ZQK0 1506 aa11.6□□□□□ -0.55
Gm28561-201ENSMUST00000189366 Top2bQ64511 1612 aa11.6□□□□□ -0.55
Gm28561-201ENSMUST00000189366 Calr4Q3TQS0 420 aa11.57□□□□□ -0.56
Gm28561-201ENSMUST00000189366 Ap3b1Q9Z1T1 1105 aa11.57□□□□□ -0.56
Gm28561-201ENSMUST00000189366 Ccdc9Q8VC31 543 aaKnown RBP11.56□□□□□ -0.56
Gm28561-201ENSMUST00000189366 Chrna2Q91X60 512 aa11.55□□□□□ -0.56
Gm28561-201ENSMUST00000189366 Ttbk1Q6PCN3 1308 aa11.55□□□□□ -0.56
Gm28561-201ENSMUST00000189366 Nolc1E9Q5C9 702 aaKnown RBP11.54□□□□□ -0.56
Gm28561-201ENSMUST00000189366 Supt16hQ920B9 1047 aa11.54□□□□□ -0.56
Gm28561-201ENSMUST00000189366 Hdac5Q9Z2V6 1113 aa11.54□□□□□ -0.56
Gm28561-201ENSMUST00000189366 Synj1Q8CHC4 1574 aa11.52□□□□□ -0.57
Gm28561-201ENSMUST00000189366 Cep162Q6ZQ06 1403 aa11.51□□□□□ -0.57
Gm28561-201ENSMUST00000189366 Ube2uB1AUC4 352 aa11.5□□□□□ -0.57
Gm28561-201ENSMUST00000189366 Rpap1Q80TE0 1409 aa11.5□□□□□ -0.57
Gm28561-201ENSMUST00000189366 Upf2A2AT37 1269 aaKnown RBP11.47□□□□□ -0.57
Gm28561-201ENSMUST00000189366 Ccdc27Q3V036 639 aa11.46□□□□□ -0.57
Gm28561-201ENSMUST00000189366 Rsph4aQ8BYM7 716 aa11.46□□□□□ -0.57
Gm28561-201ENSMUST00000189366 Dnajc5bQ9CQ94 199 aa11.45□□□□□ -0.58
Gm28561-201ENSMUST00000189366 Kdm5bQ80Y84 1544 aa11.45□□□□□ -0.58
Gm28561-201ENSMUST00000189366 Top2aQ01320 1528 aaKnown RBP11.44□□□□□ -0.58
Gm28561-201ENSMUST00000189366 Clip1Q922J3 1391 aa11.44□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 162.5 ms