RNA–Protein interactions for RNA: ENSMUST00000188678.1

Gm28977-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28977, Length 2,168 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28977-201ENSMUST00000188678 Chic1Q8CBW7 227 aa17.25■□□□□ 0.35
Gm28977-201ENSMUST00000188678 Mapk8ip2Q9ERE9 830 aa16.91■□□□□ 0.3
Gm28977-201ENSMUST00000188678 Phf23Q8BSN5 401 aa15.63■□□□□ 0.09
Gm28977-201ENSMUST00000188678 Plppr3Q7TPB0 716 aa14.95□□□□□ -0.02
Gm28977-201ENSMUST00000188678 Gab3Q8BSM5 595 aa14.84□□□□□ -0.03
Gm28977-201ENSMUST00000188678 Senp3Q9EP97 568 aaKnown RBP14.27□□□□□ -0.13
Gm28977-201ENSMUST00000188678 Rpgrip1Q9EPQ2 1331 aa13.8□□□□□ -0.2
Gm28977-201ENSMUST00000188678 Kcna4Q61423 654 aa13.73□□□□□ -0.21
Gm28977-201ENSMUST00000188678 Rtl1Q7M732 1744 aa13.12□□□□□ -0.31
Gm28977-201ENSMUST00000188678 Acin1Q9JIX8 1338 aaKnown RBP13.07□□□□□ -0.32
Gm28977-201ENSMUST00000188678 Ccdc180J3QNE4 1664 aa12.98□□□□□ -0.33
Gm28977-201ENSMUST00000188678 Pcgf6Q99NA9 353 aa12.97□□□□□ -0.33
Gm28977-201ENSMUST00000188678 Gm35339A0A140LHH9 1649 aa12.87□□□□□ -0.35
Gm28977-201ENSMUST00000188678 Myt1Q8CFC2 1127 aa12.73□□□□□ -0.37
Gm28977-201ENSMUST00000188678 Las1lA2BE28 776 aaKnown RBP12.69□□□□□ -0.38
Gm28977-201ENSMUST00000188678 NischQ80TM9 1593 aa12.62□□□□□ -0.39
Gm28977-201ENSMUST00000188678 Hoxd11P23813 323 aa12.57□□□□□ -0.4
Gm28977-201ENSMUST00000188678 Trim41Q5NCC3 630 aa12.57□□□□□ -0.4
Gm28977-201ENSMUST00000188678 Dcaf1Q80TR8 1506 aa12.54□□□□□ -0.4
Gm28977-201ENSMUST00000188678 Fam163aQ8CAA5 168 aa12.51□□□□□ -0.41
Gm28977-201ENSMUST00000188678 Neurod1Q60867 357 aa12.5□□□□□ -0.41
Gm28977-201ENSMUST00000188678 Trap1aP19473 224 aa12.49□□□□□ -0.41
Gm28977-201ENSMUST00000188678 CenpbP27790 599 aa12.48□□□□□ -0.41
Gm28977-201ENSMUST00000188678 Supt5hO55201 1082 aaKnown RBP12.4□□□□□ -0.42
Gm28977-201ENSMUST00000188678 Ube2uB1AUC4 352 aa12.35□□□□□ -0.43
Gm28977-201ENSMUST00000188678 Abcc9P70170 1546 aa12.34□□□□□ -0.43
Gm28977-201ENSMUST00000188678 DiexfQ8BTT6 772 aaKnown RBP12.33□□□□□ -0.44
Gm28977-201ENSMUST00000188678 1700123L14RikQ3V2K7 440 aa12.33□□□□□ -0.44
Gm28977-201ENSMUST00000188678 Zcchc6Q5BLK4 1491 aaKnown RBP12.29□□□□□ -0.44
Gm28977-201ENSMUST00000188678 Rhox8Q6VSS7 320 aa12.27□□□□□ -0.45
Gm28977-201ENSMUST00000188678 Dmrt2Q8BG36 561 aa12.22□□□□□ -0.45
Gm28977-201ENSMUST00000188678 Anks4bQ8K3X6 423 aa12.22□□□□□ -0.45
Gm28977-201ENSMUST00000188678 HrcG5E8J6 738 aa12.21□□□□□ -0.45
Gm28977-201ENSMUST00000188678 Ehmt2Q9Z148 1263 aaKnown RBP12.21□□□□□ -0.45
Gm28977-201ENSMUST00000188678 Abcc8B2RUS7 1588 aa12.2□□□□□ -0.46
Gm28977-201ENSMUST00000188678 Aplp2Q06335 707 aa12.15□□□□□ -0.46
Gm28977-201ENSMUST00000188678 Bcl11aQ9QYE3 773 aa12.1□□□□□ -0.47
Gm28977-201ENSMUST00000188678 Cngb1E1AZ71 1325 aa12.08□□□□□ -0.48
Gm28977-201ENSMUST00000188678 Csrnp3P59055 597 aa12.08□□□□□ -0.48
Gm28977-201ENSMUST00000188678 Znf219Q6IQX8 726 aa12.02□□□□□ -0.49
Gm28977-201ENSMUST00000188678 Ppargc1bQ8VHJ7 1014 aa12.02□□□□□ -0.49
Gm28977-201ENSMUST00000188678 ScribQ80U72 1612 aa11.9□□□□□ -0.5
Gm28977-201ENSMUST00000188678 NefmP08553 848 aa11.88□□□□□ -0.51
Gm28977-201ENSMUST00000188678 Sall2Q9QX96 1004 aa11.86□□□□□ -0.51
Gm28977-201ENSMUST00000188678 Chrna2Q91X60 512 aa11.84□□□□□ -0.51
Gm28977-201ENSMUST00000188678 Zeb1Q64318 1117 aa11.79□□□□□ -0.52
Gm28977-201ENSMUST00000188678 Cdk11bP24788 784 aaKnown RBP11.74□□□□□ -0.53
Gm28977-201ENSMUST00000188678 Rsph4aQ8BYM7 716 aa11.74□□□□□ -0.53
Gm28977-201ENSMUST00000188678 Atf5O70191 283 aa11.72□□□□□ -0.53
Gm28977-201ENSMUST00000188678 Amer1Q7TS75 1132 aa11.72□□□□□ -0.53
Gm28977-201ENSMUST00000188678 PrkcshO08795 521 aa11.71□□□□□ -0.54
Gm28977-201ENSMUST00000188678 Rimbp2Q80U40 1072 aa11.67□□□□□ -0.54
Gm28977-201ENSMUST00000188678 Nop58Q6DFW4 536 aaKnown RBP11.65□□□□□ -0.54
Gm28977-201ENSMUST00000188678 Fam71e1A1L3C1 212 aa11.6□□□□□ -0.55
Gm28977-201ENSMUST00000188678 Slc4a1apE9PX68 744 aa11.58□□□□□ -0.56
Gm28977-201ENSMUST00000188678 Cep164Q5DU05 1446 aa11.58□□□□□ -0.56
Gm28977-201ENSMUST00000188678 Rtl5Q5DTT4 599 aa11.55□□□□□ -0.56
Gm28977-201ENSMUST00000188678 ClspnQ80YR7 1315 aa11.55□□□□□ -0.56
Gm28977-201ENSMUST00000188678 Mier1Q5UAK0 511 aa11.52□□□□□ -0.56
Gm28977-201ENSMUST00000188678 Gm38655A0A286YDK6 273 aa11.51□□□□□ -0.57
Gm28977-201ENSMUST00000188678 Dnajc5bQ9CQ94 199 aa11.51□□□□□ -0.57
Gm28977-201ENSMUST00000188678 ArsiQ32KI9 573 aa11.48□□□□□ -0.57
Gm28977-201ENSMUST00000188678 Tnnt3Q9QZ47 272 aa11.47□□□□□ -0.57
Gm28977-201ENSMUST00000188678 Ifnlr1Q8CGK5 535 aa11.46□□□□□ -0.57
Gm28977-201ENSMUST00000188678 NacadQ5SWP3 1504 aa11.45□□□□□ -0.58
Gm28977-201ENSMUST00000188678 Kdm5dQ62240 1548 aa11.42□□□□□ -0.58
Gm28977-201ENSMUST00000188678 Wdr66E9Q743 1299 aa11.42□□□□□ -0.58
Gm28977-201ENSMUST00000188678 Aebp2Q9Z248 504 aaKnown RBP11.42□□□□□ -0.58
Gm28977-201ENSMUST00000188678 Ppp4r2Q0VGB7 417 aa11.41□□□□□ -0.58
Gm28977-201ENSMUST00000188678 Hs6st3Q9QYK4 470 aa11.41□□□□□ -0.58
Gm28977-201ENSMUST00000188678 Akt1s1Q9D1F4 257 aa11.38□□□□□ -0.59
Gm28977-201ENSMUST00000188678 Anp32aO35381 247 aa11.36□□□□□ -0.59
Gm28977-201ENSMUST00000188678 Pelp1Q9DBD5 1123 aaKnown RBP11.35□□□□□ -0.59
Gm28977-201ENSMUST00000188678 Hdac5Q9Z2V6 1113 aa11.31□□□□□ -0.6
Gm28977-201ENSMUST00000188678 Fgd1P52734 960 aa11.29□□□□□ -0.6
Gm28977-201ENSMUST00000188678 Hnrnpul2Q00PI9 745 aaKnown RBP11.29□□□□□ -0.6
Gm28977-201ENSMUST00000188678 SafbD3YXK2 937 aaKnown RBP11.28□□□□□ -0.6
Gm28977-201ENSMUST00000188678 Ccdc136Q3TVA9 1136 aa11.27□□□□□ -0.61
Gm28977-201ENSMUST00000188678 NrdcQ8BHG1 1161 aa11.27□□□□□ -0.61
Gm28977-201ENSMUST00000188678 Sycp2Q9CUU3 1500 aa11.25□□□□□ -0.61
Gm28977-201ENSMUST00000188678 Ccdc9Q8VC31 543 aaKnown RBP11.2□□□□□ -0.62
Gm28977-201ENSMUST00000188678 Pknox2Q8BG99 474 aa11.19□□□□□ -0.62
Gm28977-201ENSMUST00000188678 BicraF8VPZ9 1578 aa11.15□□□□□ -0.62
Gm28977-201ENSMUST00000188678 Slc34a2Q9DBP0 697 aa11.14□□□□□ -0.63
Gm28977-201ENSMUST00000188678 TonslQ6NZL6 1363 aa11.14□□□□□ -0.63
Gm28977-201ENSMUST00000188678 Bach1P97302 739 aa11.13□□□□□ -0.63
Gm28977-201ENSMUST00000188678 Gtf3c3Q3TMP1 882 aa11.13□□□□□ -0.63
Gm28977-201ENSMUST00000188678 Upf2A2AT37 1269 aaKnown RBP11.12□□□□□ -0.63
Gm28977-201ENSMUST00000188678 Rb1cc1Q9ESK9 1588 aa11.11□□□□□ -0.63
Gm28977-201ENSMUST00000188678 Nolc1E9Q5C9 702 aaKnown RBP11.09□□□□□ -0.63
Gm28977-201ENSMUST00000188678 Supt16hQ920B9 1047 aa11.07□□□□□ -0.64
Gm28977-201ENSMUST00000188678 Stra8P70278 393 aa11.06□□□□□ -0.64
Gm28977-201ENSMUST00000188678 Znf710Q3U288 666 aa11.06□□□□□ -0.64
Gm28977-201ENSMUST00000188678 Ccdc27Q3V036 639 aa11.05□□□□□ -0.64
Gm28977-201ENSMUST00000188678 Baz1aO88379 1555 aa11.05□□□□□ -0.64
Gm28977-201ENSMUST00000188678 Rsf1E9PWW9 1441 aaKnown RBP11.05□□□□□ -0.64
Gm28977-201ENSMUST00000188678 Irx3P81067 507 aa11.04□□□□□ -0.64
Gm28977-201ENSMUST00000188678 Plcd4Q8K3R3 807 aa11□□□□□ -0.65
Gm28977-201ENSMUST00000188678 Calr4Q3TQS0 420 aa10.99□□□□□ -0.65
Gm28977-201ENSMUST00000188678 Ipo4Q8VI75 1082 aa10.97□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms