RNA–Protein interactions for RNA: ENSMUST00000186357.1

Gm28547-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28547, Length 2,167 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28547-201ENSMUST00000186357 Chic1Q8CBW7 227 aa16.19■□□□□ 0.18
Gm28547-201ENSMUST00000186357 Mapk8ip2Q9ERE9 830 aa15.6■□□□□ 0.09
Gm28547-201ENSMUST00000186357 Phf23Q8BSN5 401 aa14.74□□□□□ -0.05
Gm28547-201ENSMUST00000186357 Plppr3Q7TPB0 716 aa14.29□□□□□ -0.12
Gm28547-201ENSMUST00000186357 Gab3Q8BSM5 595 aa14.05□□□□□ -0.16
Gm28547-201ENSMUST00000186357 Senp3Q9EP97 568 aaKnown RBP13.55□□□□□ -0.24
Gm28547-201ENSMUST00000186357 Kcna4Q61423 654 aa13.35□□□□□ -0.27
Gm28547-201ENSMUST00000186357 Rpgrip1Q9EPQ2 1331 aa13.26□□□□□ -0.29
Gm28547-201ENSMUST00000186357 Myt1Q8CFC2 1127 aa13.12□□□□□ -0.31
Gm28547-201ENSMUST00000186357 DiexfQ8BTT6 772 aaKnown RBP13.03□□□□□ -0.32
Gm28547-201ENSMUST00000186357 Pcgf6Q99NA9 353 aa12.86□□□□□ -0.35
Gm28547-201ENSMUST00000186357 CenpbP27790 599 aa12.71□□□□□ -0.37
Gm28547-201ENSMUST00000186357 Amer1Q7TS75 1132 aa12.65□□□□□ -0.38
Gm28547-201ENSMUST00000186357 NischQ80TM9 1593 aa12.59□□□□□ -0.39
Gm28547-201ENSMUST00000186357 Las1lA2BE28 776 aaKnown RBP12.59□□□□□ -0.39
Gm28547-201ENSMUST00000186357 Bcl11aQ9QYE3 773 aa12.53□□□□□ -0.4
Gm28547-201ENSMUST00000186357 Gm35339A0A140LHH9 1649 aa12.49□□□□□ -0.41
Gm28547-201ENSMUST00000186357 CatipB9EKE5 520 aa12.49□□□□□ -0.41
Gm28547-201ENSMUST00000186357 Rhox8Q6VSS7 320 aa12.48□□□□□ -0.41
Gm28547-201ENSMUST00000186357 Acin1Q9JIX8 1338 aaKnown RBP12.47□□□□□ -0.41
Gm28547-201ENSMUST00000186357 Rtl1Q7M732 1744 aa12.4□□□□□ -0.42
Gm28547-201ENSMUST00000186357 Ccdc180J3QNE4 1664 aa12.27□□□□□ -0.45
Gm28547-201ENSMUST00000186357 Abcc9P70170 1546 aa12.18□□□□□ -0.46
Gm28547-201ENSMUST00000186357 PrkcshO08795 521 aa12.13□□□□□ -0.47
Gm28547-201ENSMUST00000186357 1700123L14RikQ3V2K7 440 aa12.06□□□□□ -0.48
Gm28547-201ENSMUST00000186357 Abcc8B2RUS7 1588 aa12.04□□□□□ -0.48
Gm28547-201ENSMUST00000186357 Ttbk1Q6PCN3 1308 aa12.04□□□□□ -0.48
Gm28547-201ENSMUST00000186357 Ube2uB1AUC4 352 aa12.03□□□□□ -0.48
Gm28547-201ENSMUST00000186357 Neurod1Q60867 357 aa12.01□□□□□ -0.49
Gm28547-201ENSMUST00000186357 Trim41Q5NCC3 630 aa11.96□□□□□ -0.5
Gm28547-201ENSMUST00000186357 Ppargc1bQ8VHJ7 1014 aa11.96□□□□□ -0.5
Gm28547-201ENSMUST00000186357 Dmrt2Q8BG36 561 aa11.89□□□□□ -0.51
Gm28547-201ENSMUST00000186357 Dcaf1Q80TR8 1506 aa11.88□□□□□ -0.51
Gm28547-201ENSMUST00000186357 Trap1aP19473 224 aa11.85□□□□□ -0.51
Gm28547-201ENSMUST00000186357 Aplp2Q06335 707 aa11.83□□□□□ -0.52
Gm28547-201ENSMUST00000186357 Hoxd11P23813 323 aa11.82□□□□□ -0.52
Gm28547-201ENSMUST00000186357 Supt5hO55201 1082 aaKnown RBP11.82□□□□□ -0.52
Gm28547-201ENSMUST00000186357 Pknox2Q8BG99 474 aa11.79□□□□□ -0.52
Gm28547-201ENSMUST00000186357 Anks4bQ8K3X6 423 aa11.73□□□□□ -0.53
Gm28547-201ENSMUST00000186357 Gtf3c5Q8R2T8 520 aa11.72□□□□□ -0.53
Gm28547-201ENSMUST00000186357 NrdcQ8BHG1 1161 aa11.71□□□□□ -0.53
Gm28547-201ENSMUST00000186357 BccipQ9CWI3 316 aa11.71□□□□□ -0.53
Gm28547-201ENSMUST00000186357 Cngb1E1AZ71 1325 aa11.69□□□□□ -0.54
Gm28547-201ENSMUST00000186357 Fgd1P52734 960 aa11.68□□□□□ -0.54
Gm28547-201ENSMUST00000186357 Csrnp3P59055 597 aa11.61□□□□□ -0.55
Gm28547-201ENSMUST00000186357 Cdk11bP24788 784 aaKnown RBP11.56□□□□□ -0.56
Gm28547-201ENSMUST00000186357 Ehmt2Q9Z148 1263 aaKnown RBP11.55□□□□□ -0.56
Gm28547-201ENSMUST00000186357 Zcchc6Q5BLK4 1491 aaKnown RBP11.53□□□□□ -0.56
Gm28547-201ENSMUST00000186357 ScribQ80U72 1612 aa11.53□□□□□ -0.56
Gm28547-201ENSMUST00000186357 HrcG5E8J6 738 aa11.48□□□□□ -0.57
Gm28547-201ENSMUST00000186357 ArxO35085 564 aa11.48□□□□□ -0.57
Gm28547-201ENSMUST00000186357 Ifnlr1Q8CGK5 535 aa11.48□□□□□ -0.57
Gm28547-201ENSMUST00000186357 TimelessQ9R1X4 1197 aa11.45□□□□□ -0.58
Gm28547-201ENSMUST00000186357 Hdac5Q9Z2V6 1113 aa11.44□□□□□ -0.58
Gm28547-201ENSMUST00000186357 Znf316Q6PGE4 1016 aa11.43□□□□□ -0.58
Gm28547-201ENSMUST00000186357 Fam163aQ8CAA5 168 aa11.43□□□□□ -0.58
Gm28547-201ENSMUST00000186357 Slc4a1apE9PX68 744 aa11.4□□□□□ -0.59
Gm28547-201ENSMUST00000186357 Gm38655A0A286YDK6 273 aa11.39□□□□□ -0.59
Gm28547-201ENSMUST00000186357 Rtl5Q5DTT4 599 aa11.35□□□□□ -0.59
Gm28547-201ENSMUST00000186357 Eif5bQ05D44 1216 aaKnown RBP11.34□□□□□ -0.59
Gm28547-201ENSMUST00000186357 Atf5O70191 283 aa11.33□□□□□ -0.6
Gm28547-201ENSMUST00000186357 Scaf1Q5U4C3 1256 aaKnown RBP11.3□□□□□ -0.6
Gm28547-201ENSMUST00000186357 NefmP08553 848 aa11.29□□□□□ -0.6
Gm28547-201ENSMUST00000186357 Sall2Q9QX96 1004 aa11.27□□□□□ -0.61
Gm28547-201ENSMUST00000186357 Znf219Q6IQX8 726 aa11.24□□□□□ -0.61
Gm28547-201ENSMUST00000186357 Fam71e1A1L3C1 212 aa11.23□□□□□ -0.61
Gm28547-201ENSMUST00000186357 Dnajc5bQ9CQ94 199 aa11.23□□□□□ -0.61
Gm28547-201ENSMUST00000186357 Zeb1Q64318 1117 aa11.22□□□□□ -0.61
Gm28547-201ENSMUST00000186357 Chrna2Q91X60 512 aa11.18□□□□□ -0.62
Gm28547-201ENSMUST00000186357 Rsph4aQ8BYM7 716 aa11.17□□□□□ -0.62
Gm28547-201ENSMUST00000186357 Gtf3c3Q3TMP1 882 aa11.16□□□□□ -0.62
Gm28547-201ENSMUST00000186357 Ccdc9Q8VC31 543 aaKnown RBP11.13□□□□□ -0.63
Gm28547-201ENSMUST00000186357 NacadQ5SWP3 1504 aa11.13□□□□□ -0.63
Gm28547-201ENSMUST00000186357 Kdm5dQ62240 1548 aa11.12□□□□□ -0.63
Gm28547-201ENSMUST00000186357 Nop58Q6DFW4 536 aaKnown RBP11.12□□□□□ -0.63
Gm28547-201ENSMUST00000186357 Pelp1Q9DBD5 1123 aaKnown RBP11.1□□□□□ -0.63
Gm28547-201ENSMUST00000186357 Zfp777B9EKF4 885 aa11.07□□□□□ -0.64
Gm28547-201ENSMUST00000186357 Plcd4Q8K3R3 807 aa11.06□□□□□ -0.64
Gm28547-201ENSMUST00000186357 Ipo4Q8VI75 1082 aa11.06□□□□□ -0.64
Gm28547-201ENSMUST00000186357 Ncbp3Q8BZR9 615 aaKnown RBP11.04□□□□□ -0.64
Gm28547-201ENSMUST00000186357 Ube2q2Q8K2Z8 378 aa11.03□□□□□ -0.64
Gm28547-201ENSMUST00000186357 Anp32bQ9EST5 272 aaKnown RBP11.02□□□□□ -0.65
Gm28547-201ENSMUST00000186357 Ppp4r2Q0VGB7 417 aa11.01□□□□□ -0.65
Gm28547-201ENSMUST00000186357 Rb1cc1Q9ESK9 1588 aa11□□□□□ -0.65
Gm28547-201ENSMUST00000186357 Rimbp2Q80U40 1072 aa11□□□□□ -0.65
Gm28547-201ENSMUST00000186357 Irx3P81067 507 aa10.99□□□□□ -0.65
Gm28547-201ENSMUST00000186357 ClspnQ80YR7 1315 aa10.99□□□□□ -0.65
Gm28547-201ENSMUST00000186357 Tnnt3Q9QZ47 272 aa10.99□□□□□ -0.65
Gm28547-201ENSMUST00000186357 Hs6st3Q9QYK4 470 aa10.97□□□□□ -0.65
Gm28547-201ENSMUST00000186357 4930567H17RikQ3V0K5 233 aa10.96□□□□□ -0.65
Gm28547-201ENSMUST00000186357 Sycp2Q9CUU3 1500 aa10.93□□□□□ -0.66
Gm28547-201ENSMUST00000186357 Upf2A2AT37 1269 aaKnown RBP10.93□□□□□ -0.66
Gm28547-201ENSMUST00000186357 AampJ3QN89 436 aa10.92□□□□□ -0.66
Gm28547-201ENSMUST00000186357 Fbxo3Q9DC63 480 aa10.92□□□□□ -0.66
Gm28547-201ENSMUST00000186357 Anp32aO35381 247 aa10.9□□□□□ -0.66
Gm28547-201ENSMUST00000186357 Ythdc1E9Q5K9 736 aaKnown RBP10.89□□□□□ -0.67
Gm28547-201ENSMUST00000186357 Znf326O88291 580 aa10.89□□□□□ -0.67
Gm28547-201ENSMUST00000186357 Aebp2Q9Z248 504 aaKnown RBP10.89□□□□□ -0.67
Gm28547-201ENSMUST00000186357 Cep164Q5DU05 1446 aa10.88□□□□□ -0.67
Gm28547-201ENSMUST00000186357 NclP09405 707 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms