RNA–Protein interactions for RNA: ENSMUST00000185405.6

Clasp1-205, Transcript of CLIP-associating protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Clasp1, Length 4,597 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clasp1-205ENSMUST00000185405 Rhox8Q6VSS7 320 aa15.83■□□□□ 0.13
Clasp1-205ENSMUST00000185405 NischQ80TM9 1593 aa15.31■□□□□ 0.04
Clasp1-205ENSMUST00000185405 Rpgrip1Q9EPQ2 1331 aa15.19■□□□□ 0.02
Clasp1-205ENSMUST00000185405 Las1lA2BE28 776 aaKnown RBP14.67□□□□□ -0.06
Clasp1-205ENSMUST00000185405 Myt1Q8CFC2 1127 aa14.56□□□□□ -0.08
Clasp1-205ENSMUST00000185405 Abcc9P70170 1546 aa14.49□□□□□ -0.09
Clasp1-205ENSMUST00000185405 Ccdc136Q3TVA9 1136 aa14.39□□□□□ -0.11
Clasp1-205ENSMUST00000185405 DiexfQ8BTT6 772 aaKnown RBP14.26□□□□□ -0.13
Clasp1-205ENSMUST00000185405 Abcc8B2RUS7 1588 aa14.26□□□□□ -0.13
Clasp1-205ENSMUST00000185405 CenpbP27790 599 aa14.25□□□□□ -0.13
Clasp1-205ENSMUST00000185405 Amer1Q7TS75 1132 aa14.21□□□□□ -0.14
Clasp1-205ENSMUST00000185405 Cngb1E1AZ71 1325 aa14.08□□□□□ -0.16
Clasp1-205ENSMUST00000185405 Gm35339A0A140LHH9 1649 aa14.08□□□□□ -0.16
Clasp1-205ENSMUST00000185405 Pcgf6Q99NA9 353 aa14□□□□□ -0.17
Clasp1-205ENSMUST00000185405 Esf1Q3V1V3 845 aaKnown RBP14□□□□□ -0.17
Clasp1-205ENSMUST00000185405 Trim41Q5NCC3 630 aa13.98□□□□□ -0.17
Clasp1-205ENSMUST00000185405 Ehmt2Q9Z148 1263 aaKnown RBP13.93□□□□□ -0.18
Clasp1-205ENSMUST00000185405 Acin1Q9JIX8 1338 aaKnown RBP13.84□□□□□ -0.19
Clasp1-205ENSMUST00000185405 Gab3Q8BSM5 595 aa13.78□□□□□ -0.2
Clasp1-205ENSMUST00000185405 Zcchc6Q5BLK4 1491 aaKnown RBP13.74□□□□□ -0.21
Clasp1-205ENSMUST00000185405 Ccdc180J3QNE4 1664 aa13.63□□□□□ -0.23
Clasp1-205ENSMUST00000185405 Rtl1Q7M732 1744 aa13.61□□□□□ -0.23
Clasp1-205ENSMUST00000185405 Pelp1Q9DBD5 1123 aaKnown RBP13.55□□□□□ -0.24
Clasp1-205ENSMUST00000185405 Npm2Q80W85 207 aa13.51□□□□□ -0.25
Clasp1-205ENSMUST00000185405 HrcG5E8J6 738 aa13.47□□□□□ -0.25
Clasp1-205ENSMUST00000185405 Bcl11aQ9QYE3 773 aa13.47□□□□□ -0.25
Clasp1-205ENSMUST00000185405 Myt1lP97500 1187 aa13.47□□□□□ -0.25
Clasp1-205ENSMUST00000185405 Zeb1Q64318 1117 aa13.47□□□□□ -0.25
Clasp1-205ENSMUST00000185405 Rb1cc1Q9ESK9 1588 aa13.42□□□□□ -0.26
Clasp1-205ENSMUST00000185405 Neurod1Q60867 357 aa13.33□□□□□ -0.28
Clasp1-205ENSMUST00000185405 Il27Q8K3I6 234 aa13.33□□□□□ -0.28
Clasp1-205ENSMUST00000185405 NacadQ5SWP3 1504 aa13.31□□□□□ -0.28
Clasp1-205ENSMUST00000185405 Aplp2Q06335 707 aa13.21□□□□□ -0.29
Clasp1-205ENSMUST00000185405 Kdm5dQ62240 1548 aa13.2□□□□□ -0.3
Clasp1-205ENSMUST00000185405 Supt5hO55201 1082 aaKnown RBP13.2□□□□□ -0.3
Clasp1-205ENSMUST00000185405 1700123L14RikQ3V2K7 440 aa13.19□□□□□ -0.3
Clasp1-205ENSMUST00000185405 Dcaf1Q80TR8 1506 aa13.17□□□□□ -0.3
Clasp1-205ENSMUST00000185405 Rtl5Q5DTT4 599 aa13.16□□□□□ -0.3
Clasp1-205ENSMUST00000185405 Baz1aO88379 1555 aa13.15□□□□□ -0.3
Clasp1-205ENSMUST00000185405 UbtfP25976 765 aaKnown RBP13.14□□□□□ -0.31
Clasp1-205ENSMUST00000185405 Brd4Q9ESU6 1400 aaKnown RBP13.11□□□□□ -0.31
Clasp1-205ENSMUST00000185405 Anks4bQ8K3X6 423 aa13.11□□□□□ -0.31
Clasp1-205ENSMUST00000185405 Ube2uB1AUC4 352 aa13.08□□□□□ -0.31
Clasp1-205ENSMUST00000185405 Wdr66E9Q743 1299 aa13.04□□□□□ -0.32
Clasp1-205ENSMUST00000185405 Csrnp3P59055 597 aa13.04□□□□□ -0.32
Clasp1-205ENSMUST00000185405 ScribQ80U72 1612 aa13.03□□□□□ -0.32
Clasp1-205ENSMUST00000185405 Chic1Q8CBW7 227 aa13.01□□□□□ -0.33
Clasp1-205ENSMUST00000185405 Cdk11bP24788 784 aaKnown RBP12.99□□□□□ -0.33
Clasp1-205ENSMUST00000185405 Ap3b1Q9Z1T1 1105 aa12.95□□□□□ -0.34
Clasp1-205ENSMUST00000185405 Npm1Q61937 292 aaKnown RBP12.91□□□□□ -0.34
Clasp1-205ENSMUST00000185405 PrkcshO08795 521 aa12.89□□□□□ -0.35
Clasp1-205ENSMUST00000185405 Ttbk1Q6PCN3 1308 aa12.89□□□□□ -0.35
Clasp1-205ENSMUST00000185405 NefmP08553 848 aa12.88□□□□□ -0.35
Clasp1-205ENSMUST00000185405 Cep164Q5DU05 1446 aa12.87□□□□□ -0.35
Clasp1-205ENSMUST00000185405 Sycp2Q9CUU3 1500 aa12.84□□□□□ -0.35
Clasp1-205ENSMUST00000185405 Tnnt3Q9QZ47 272 aa12.83□□□□□ -0.36
Clasp1-205ENSMUST00000185405 Nop58Q6DFW4 536 aaKnown RBP12.79□□□□□ -0.36
Clasp1-205ENSMUST00000185405 CatipB9EKE5 520 aa12.77□□□□□ -0.36
Clasp1-205ENSMUST00000185405 Ubl4bQ9CQ84 188 aa12.77□□□□□ -0.36
Clasp1-205ENSMUST00000185405 Golga3P55937 1487 aa12.74□□□□□ -0.37
Clasp1-205ENSMUST00000185405 Pknox2Q8BG99 474 aa12.74□□□□□ -0.37
Clasp1-205ENSMUST00000185405 Fam50aQ9WV03 339 aaKnown RBP12.74□□□□□ -0.37
Clasp1-205ENSMUST00000185405 Plekhg3Q4VAC9 1341 aa12.74□□□□□ -0.37
Clasp1-205ENSMUST00000185405 Ccdc9Q8VC31 543 aaKnown RBP12.71□□□□□ -0.37
Clasp1-205ENSMUST00000185405 Mier1Q5UAK0 511 aa12.7□□□□□ -0.38
Clasp1-205ENSMUST00000185405 Crybg2B7ZCC2 1516 aa12.69□□□□□ -0.38
Clasp1-205ENSMUST00000185405 Lmod2Q3UHZ5 550 aa12.68□□□□□ -0.38
Clasp1-205ENSMUST00000185405 Anp32aO35381 247 aa12.66□□□□□ -0.38
Clasp1-205ENSMUST00000185405 Cecr2E9Q2Z1 1453 aa12.65□□□□□ -0.38
Clasp1-205ENSMUST00000185405 Rsf1E9PWW9 1441 aaKnown RBP12.64□□□□□ -0.39
Clasp1-205ENSMUST00000185405 Fam71e1A1L3C1 212 aa12.62□□□□□ -0.39
Clasp1-205ENSMUST00000185405 Smarca2Q6DIC0 1577 aa12.61□□□□□ -0.39
Clasp1-205ENSMUST00000185405 Kif15Q6P9L6 1387 aa12.61□□□□□ -0.39
Clasp1-205ENSMUST00000185405 Clip1Q922J3 1391 aa12.59□□□□□ -0.39
Clasp1-205ENSMUST00000185405 Gm38655A0A286YDK6 273 aa12.59□□□□□ -0.39
Clasp1-205ENSMUST00000185405 NrdcQ8BHG1 1161 aa12.59□□□□□ -0.39
Clasp1-205ENSMUST00000185405 4933416C03RikQ3V063 378 aa12.57□□□□□ -0.4
Clasp1-205ENSMUST00000185405 Ercc6F8VPZ5 1481 aa12.57□□□□□ -0.4
Clasp1-205ENSMUST00000185405 Pds5bQ4VA53 1446 aaKnown RBP12.56□□□□□ -0.4
Clasp1-205ENSMUST00000185405 Ccdc88bQ4QRL3 1481 aa12.54□□□□□ -0.4
Clasp1-205ENSMUST00000185405 Stra8P70278 393 aa12.54□□□□□ -0.4
Clasp1-205ENSMUST00000185405 Ppargc1bQ8VHJ7 1014 aa12.54□□□□□ -0.4
Clasp1-205ENSMUST00000185405 CftrP26361 1476 aa12.52□□□□□ -0.4
Clasp1-205ENSMUST00000185405 Ythdc1E9Q5K9 736 aaKnown RBP12.5□□□□□ -0.41
Clasp1-205ENSMUST00000185405 4930567H17RikQ3V0K5 233 aa12.49□□□□□ -0.41
Clasp1-205ENSMUST00000185405 BccipQ9CWI3 316 aa12.49□□□□□ -0.41
Clasp1-205ENSMUST00000185405 TonslQ6NZL6 1363 aa12.47□□□□□ -0.41
Clasp1-205ENSMUST00000185405 Sall2Q9QX96 1004 aa12.47□□□□□ -0.41
Clasp1-205ENSMUST00000185405 NclP09405 707 aaKnown RBP12.46□□□□□ -0.42
Clasp1-205ENSMUST00000185405 Hdac5Q9Z2V6 1113 aa12.46□□□□□ -0.42
Clasp1-205ENSMUST00000185405 Synj1Q8CHC4 1574 aa12.46□□□□□ -0.42
Clasp1-205ENSMUST00000185405 Irx3P81067 507 aa12.42□□□□□ -0.42
Clasp1-205ENSMUST00000185405 Eid3Q3V124 375 aa12.41□□□□□ -0.42
Clasp1-205ENSMUST00000185405 Fkbp15Q6P9Q6 1216 aaKnown RBP12.41□□□□□ -0.42
Clasp1-205ENSMUST00000185405 Ccdc18Q640L5 1455 aa12.41□□□□□ -0.42
Clasp1-205ENSMUST00000185405 Atad2bE9Q166 1460 aaKnown RBP12.4□□□□□ -0.42
Clasp1-205ENSMUST00000185405 Setd5Q5XJV7 1441 aa12.39□□□□□ -0.43
Clasp1-205ENSMUST00000185405 Ifnlr1Q8CGK5 535 aa12.38□□□□□ -0.43
Clasp1-205ENSMUST00000185405 Smarca4Q3TKT4 1613 aaKnown RBP12.38□□□□□ -0.43
Clasp1-205ENSMUST00000185405 Slc24a1Q91WD8 1130 aa12.38□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 131.1 ms