RNA–Protein interactions for RNA: ENSMUST00000143275.2

Synpo-209, Transcript of Synaptopodin, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Synpo, Length 5,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Synpo-209ENSMUST00000143275 Rhox8Q6VSS7 320 aa22.65■■□□□ 1.22
Synpo-209ENSMUST00000143275 NischQ80TM9 1593 aa20.84■□□□□ 0.93
Synpo-209ENSMUST00000143275 Rpgrip1Q9EPQ2 1331 aa20.75■□□□□ 0.91
Synpo-209ENSMUST00000143275 Ccdc136Q3TVA9 1136 aa20.23■□□□□ 0.83
Synpo-209ENSMUST00000143275 Ehmt2Q9Z148 1263 aaKnown RBP20.04■□□□□ 0.8
Synpo-209ENSMUST00000143275 Trim41Q5NCC3 630 aa20.02■□□□□ 0.8
Synpo-209ENSMUST00000143275 Esf1Q3V1V3 845 aaKnown RBP19.97■□□□□ 0.79
Synpo-209ENSMUST00000143275 Cngb1E1AZ71 1325 aa19.95■□□□□ 0.78
Synpo-209ENSMUST00000143275 Gab3Q8BSM5 595 aa19.64■□□□□ 0.73
Synpo-209ENSMUST00000143275 Ccdc180J3QNE4 1664 aa19.6■□□□□ 0.73
Synpo-209ENSMUST00000143275 Abcc9P70170 1546 aa19.6■□□□□ 0.73
Synpo-209ENSMUST00000143275 Las1lA2BE28 776 aaKnown RBP19.59■□□□□ 0.73
Synpo-209ENSMUST00000143275 Rtl1Q7M732 1744 aa19.54■□□□□ 0.72
Synpo-209ENSMUST00000143275 Npm2Q80W85 207 aa19.47■□□□□ 0.71
Synpo-209ENSMUST00000143275 Wdr66E9Q743 1299 aa19.42■□□□□ 0.7
Synpo-209ENSMUST00000143275 HrcG5E8J6 738 aa19.4■□□□□ 0.7
Synpo-209ENSMUST00000143275 Zeb1Q64318 1117 aa19.39■□□□□ 0.69
Synpo-209ENSMUST00000143275 Acin1Q9JIX8 1338 aaKnown RBP19.36■□□□□ 0.69
Synpo-209ENSMUST00000143275 Myt1lP97500 1187 aa19.28■□□□□ 0.68
Synpo-209ENSMUST00000143275 Ube2uB1AUC4 352 aa19.22■□□□□ 0.67
Synpo-209ENSMUST00000143275 NefmP08553 848 aa19.16■□□□□ 0.66
Synpo-209ENSMUST00000143275 Abcc8B2RUS7 1588 aa19.15■□□□□ 0.66
Synpo-209ENSMUST00000143275 Zcchc6Q5BLK4 1491 aaKnown RBP19.05■□□□□ 0.64
Synpo-209ENSMUST00000143275 UbtfP25976 765 aaKnown RBP18.95■□□□□ 0.62
Synpo-209ENSMUST00000143275 Pelp1Q9DBD5 1123 aaKnown RBP18.86■□□□□ 0.61
Synpo-209ENSMUST00000143275 Gm35339A0A140LHH9 1649 aa18.72■□□□□ 0.59
Synpo-209ENSMUST00000143275 Il27Q8K3I6 234 aa18.71■□□□□ 0.58
Synpo-209ENSMUST00000143275 Stra8P70278 393 aa18.67■□□□□ 0.58
Synpo-209ENSMUST00000143275 CenpbP27790 599 aa18.54■□□□□ 0.56
Synpo-209ENSMUST00000143275 Pcgf6Q99NA9 353 aa18.51■□□□□ 0.55
Synpo-209ENSMUST00000143275 Cdk11bP24788 784 aaKnown RBP18.42■□□□□ 0.54
Synpo-209ENSMUST00000143275 Ap3b1Q9Z1T1 1105 aa18.36■□□□□ 0.53
Synpo-209ENSMUST00000143275 Fam50aQ9WV03 339 aaKnown RBP18.36■□□□□ 0.53
Synpo-209ENSMUST00000143275 Brd4Q9ESU6 1400 aaKnown RBP18.35■□□□□ 0.53
Synpo-209ENSMUST00000143275 Rb1cc1Q9ESK9 1588 aa18.33■□□□□ 0.52
Synpo-209ENSMUST00000143275 Mier1Q5UAK0 511 aa18.26■□□□□ 0.51
Synpo-209ENSMUST00000143275 TonslQ6NZL6 1363 aa18.26■□□□□ 0.51
Synpo-209ENSMUST00000143275 Slc24a1Q91WD8 1130 aa18.25■□□□□ 0.51
Synpo-209ENSMUST00000143275 NclP09405 707 aaKnown RBP18.24■□□□□ 0.51
Synpo-209ENSMUST00000143275 Nop58Q6DFW4 536 aaKnown RBP18.24■□□□□ 0.51
Synpo-209ENSMUST00000143275 Cep164Q5DU05 1446 aa18.23■□□□□ 0.51
Synpo-209ENSMUST00000143275 Dcaf1Q80TR8 1506 aa18.22■□□□□ 0.51
Synpo-209ENSMUST00000143275 Tnnt3Q9QZ47 272 aa18.21■□□□□ 0.5
Synpo-209ENSMUST00000143275 Supt5hO55201 1082 aaKnown RBP18.18■□□□□ 0.5
Synpo-209ENSMUST00000143275 Npm1Q61937 292 aaKnown RBP18.17■□□□□ 0.5
Synpo-209ENSMUST00000143275 Anp32bQ9EST5 272 aaKnown RBP18.14■□□□□ 0.49
Synpo-209ENSMUST00000143275 NrdcQ8BHG1 1161 aa18.12■□□□□ 0.49
Synpo-209ENSMUST00000143275 NacadQ5SWP3 1504 aa18.08■□□□□ 0.49
Synpo-209ENSMUST00000143275 Neurod1Q60867 357 aa18.05■□□□□ 0.48
Synpo-209ENSMUST00000143275 Plekhg3Q4VAC9 1341 aa18.02■□□□□ 0.47
Synpo-209ENSMUST00000143275 Chic1Q8CBW7 227 aa18.01■□□□□ 0.47
Synpo-209ENSMUST00000143275 Baz1aO88379 1555 aa17.98■□□□□ 0.47
Synpo-209ENSMUST00000143275 ClspnQ80YR7 1315 aa17.95■□□□□ 0.46
Synpo-209ENSMUST00000143275 Ppargc1bQ8VHJ7 1014 aa17.94■□□□□ 0.46
Synpo-209ENSMUST00000143275 Lmod2Q3UHZ5 550 aa17.93■□□□□ 0.46
Synpo-209ENSMUST00000143275 Clip1Q922J3 1391 aa17.92■□□□□ 0.46
Synpo-209ENSMUST00000143275 Myt1Q8CFC2 1127 aa17.9■□□□□ 0.46
Synpo-209ENSMUST00000143275 Os9Q8K2C7 672 aa17.85■□□□□ 0.45
Synpo-209ENSMUST00000143275 NeflP08551 543 aa17.84■□□□□ 0.45
Synpo-209ENSMUST00000143275 Eif5bQ05D44 1216 aaKnown RBP17.78■□□□□ 0.44
Synpo-209ENSMUST00000143275 Ccer2J3QPU5 274 aa17.75■□□□□ 0.43
Synpo-209ENSMUST00000143275 Golga3P55937 1487 aa17.73■□□□□ 0.43
Synpo-209ENSMUST00000143275 Amer1Q7TS75 1132 aa17.67■□□□□ 0.42
Synpo-209ENSMUST00000143275 Kdm5dQ62240 1548 aa17.67■□□□□ 0.42
Synpo-209ENSMUST00000143275 Ubl4bQ9CQ84 188 aa17.65■□□□□ 0.42
Synpo-209ENSMUST00000143275 Eid3Q3V124 375 aa17.62■□□□□ 0.41
Synpo-209ENSMUST00000143275 Sall2Q9QX96 1004 aa17.62■□□□□ 0.41
Synpo-209ENSMUST00000143275 Rtl5Q5DTT4 599 aa17.6■□□□□ 0.41
Synpo-209ENSMUST00000143275 Hdac5Q9Z2V6 1113 aa17.59■□□□□ 0.41
Synpo-209ENSMUST00000143275 Hnrnpul2Q00PI9 745 aaKnown RBP17.57■□□□□ 0.4
Synpo-209ENSMUST00000143275 Zbtb7cQ8VCZ7 619 aa17.56■□□□□ 0.4
Synpo-209ENSMUST00000143275 Rsf1E9PWW9 1441 aaKnown RBP17.51■□□□□ 0.39
Synpo-209ENSMUST00000143275 BlmO88700 1416 aa17.51■□□□□ 0.39
Synpo-209ENSMUST00000143275 Setd5Q5XJV7 1441 aa17.5■□□□□ 0.39
Synpo-209ENSMUST00000143275 Anks4bQ8K3X6 423 aa17.49■□□□□ 0.39
Synpo-209ENSMUST00000143275 Anp32aO35381 247 aa17.46■□□□□ 0.39
Synpo-209ENSMUST00000143275 4933416C03RikQ3V063 378 aa17.45■□□□□ 0.38
Synpo-209ENSMUST00000143275 Kif15Q6P9L6 1387 aa17.43■□□□□ 0.38
Synpo-209ENSMUST00000143275 Ercc6F8VPZ5 1481 aa17.39■□□□□ 0.37
Synpo-209ENSMUST00000143275 Mapk8ip2Q9ERE9 830 aa17.39■□□□□ 0.37
Synpo-209ENSMUST00000143275 Ttbk1Q6PCN3 1308 aa17.38■□□□□ 0.37
Synpo-209ENSMUST00000143275 Eea1Q8BL66 1411 aa17.37■□□□□ 0.37
Synpo-209ENSMUST00000143275 Ccdc18Q640L5 1455 aa17.37■□□□□ 0.37
Synpo-209ENSMUST00000143275 Fkbp15Q6P9Q6 1216 aaKnown RBP17.37■□□□□ 0.37
Synpo-209ENSMUST00000143275 Erich6D3Z6S9 713 aa17.36■□□□□ 0.37
Synpo-209ENSMUST00000143275 Ifnlr1Q8CGK5 535 aa17.35■□□□□ 0.37
Synpo-209ENSMUST00000143275 Crybg2B7ZCC2 1516 aa17.34■□□□□ 0.37
Synpo-209ENSMUST00000143275 Chic2Q9D9G3 165 aa17.33■□□□□ 0.36
Synpo-209ENSMUST00000143275 Nlrp6Q91WS2 869 aa17.31■□□□□ 0.36
Synpo-209ENSMUST00000143275 Clstn2Q9ER65 966 aa17.31■□□□□ 0.36
Synpo-209ENSMUST00000143275 Gm13697A2AK42 830 aa17.3■□□□□ 0.36
Synpo-209ENSMUST00000143275 Zbtb4Q5F293 982 aa17.29■□□□□ 0.36
Synpo-209ENSMUST00000143275 Aplp2Q06335 707 aa17.25■□□□□ 0.35
Synpo-209ENSMUST00000143275 Sycp2Q9CUU3 1500 aa17.24■□□□□ 0.35
Synpo-209ENSMUST00000143275 Fmn1Q05860 1466 aa17.21■□□□□ 0.34
Synpo-209ENSMUST00000143275 Atp1b4Q99ME6 356 aa17.2■□□□□ 0.34
Synpo-209ENSMUST00000143275 Csrnp3P59055 597 aa17.2■□□□□ 0.34
Synpo-209ENSMUST00000143275 Pds5bQ4VA53 1446 aaKnown RBP17.19■□□□□ 0.34
Synpo-209ENSMUST00000143275 Upf2A2AT37 1269 aaKnown RBP17.19■□□□□ 0.34
Synpo-209ENSMUST00000143275 Ccdc88bQ4QRL3 1481 aa17.18■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 64.3 ms