RNA–Protein interactions for RNA: ENSMUST00000115414.2

Ilf3-202, Transcript of Interleukin enhancer-binding factor 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ilf3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ilf3-202ENSMUST00000115414 Rtl1Q7M732 1744 aa18.76■□□□□ 0.59
Ilf3-202ENSMUST00000115414 Gm35339A0A140LHH9 1649 aa18.59■□□□□ 0.57
Ilf3-202ENSMUST00000115414 NischQ80TM9 1593 aa18.32■□□□□ 0.52
Ilf3-202ENSMUST00000115414 Ccdc180J3QNE4 1664 aa18.18■□□□□ 0.5
Ilf3-202ENSMUST00000115414 Abcc9P70170 1546 aa18.17■□□□□ 0.5
Ilf3-202ENSMUST00000115414 Rpgrip1Q9EPQ2 1331 aa18.13■□□□□ 0.49
Ilf3-202ENSMUST00000115414 Zcchc6Q5BLK4 1491 aaKnown RBP17.59■□□□□ 0.41
Ilf3-202ENSMUST00000115414 Abcc8B2RUS7 1588 aa17.4■□□□□ 0.38
Ilf3-202ENSMUST00000115414 Dcaf1Q80TR8 1506 aa17.31■□□□□ 0.36
Ilf3-202ENSMUST00000115414 Acin1Q9JIX8 1338 aaKnown RBP17.29■□□□□ 0.36
Ilf3-202ENSMUST00000115414 Myt1Q8CFC2 1127 aa17.25■□□□□ 0.35
Ilf3-202ENSMUST00000115414 Pcgf6Q99NA9 353 aa17.23■□□□□ 0.35
Ilf3-202ENSMUST00000115414 Rhox8Q6VSS7 320 aa17.04■□□□□ 0.32
Ilf3-202ENSMUST00000115414 Trim41Q5NCC3 630 aa16.84■□□□□ 0.29
Ilf3-202ENSMUST00000115414 HrcG5E8J6 738 aa16.71■□□□□ 0.27
Ilf3-202ENSMUST00000115414 DiexfQ8BTT6 772 aaKnown RBP16.71■□□□□ 0.27
Ilf3-202ENSMUST00000115414 CenpbP27790 599 aa16.6■□□□□ 0.25
Ilf3-202ENSMUST00000115414 Las1lA2BE28 776 aaKnown RBP16.55■□□□□ 0.24
Ilf3-202ENSMUST00000115414 Bcl11aQ9QYE3 773 aa16.38■□□□□ 0.21
Ilf3-202ENSMUST00000115414 Ehmt2Q9Z148 1263 aaKnown RBP16.37■□□□□ 0.21
Ilf3-202ENSMUST00000115414 Neurod1Q60867 357 aa16.25■□□□□ 0.19
Ilf3-202ENSMUST00000115414 1700123L14RikQ3V2K7 440 aa16.23■□□□□ 0.19
Ilf3-202ENSMUST00000115414 Cep164Q5DU05 1446 aa16.13■□□□□ 0.17
Ilf3-202ENSMUST00000115414 Rb1cc1Q9ESK9 1588 aa16.12■□□□□ 0.17
Ilf3-202ENSMUST00000115414 Baz1aO88379 1555 aa16.11■□□□□ 0.17
Ilf3-202ENSMUST00000115414 Supt5hO55201 1082 aaKnown RBP16.1■□□□□ 0.17
Ilf3-202ENSMUST00000115414 Aplp2Q06335 707 aa16■□□□□ 0.15
Ilf3-202ENSMUST00000115414 Anks4bQ8K3X6 423 aa15.99■□□□□ 0.15
Ilf3-202ENSMUST00000115414 Crybg2B7ZCC2 1516 aa15.99■□□□□ 0.15
Ilf3-202ENSMUST00000115414 ScribQ80U72 1612 aa15.96■□□□□ 0.15
Ilf3-202ENSMUST00000115414 Smarca2Q6DIC0 1577 aa15.95■□□□□ 0.14
Ilf3-202ENSMUST00000115414 Cngb1E1AZ71 1325 aa15.87■□□□□ 0.13
Ilf3-202ENSMUST00000115414 Amer1Q7TS75 1132 aa15.86■□□□□ 0.13
Ilf3-202ENSMUST00000115414 CatipB9EKE5 520 aa15.85■□□□□ 0.13
Ilf3-202ENSMUST00000115414 PrkcshO08795 521 aa15.81■□□□□ 0.12
Ilf3-202ENSMUST00000115414 NefmP08553 848 aa15.73■□□□□ 0.11
Ilf3-202ENSMUST00000115414 Ccdc136Q3TVA9 1136 aa15.66■□□□□ 0.1
Ilf3-202ENSMUST00000115414 Csrnp3P59055 597 aa15.6■□□□□ 0.09
Ilf3-202ENSMUST00000115414 Kdm5dQ62240 1548 aa15.59■□□□□ 0.09
Ilf3-202ENSMUST00000115414 Zeb1Q64318 1117 aa15.56■□□□□ 0.08
Ilf3-202ENSMUST00000115414 Sall2Q9QX96 1004 aa15.53■□□□□ 0.08
Ilf3-202ENSMUST00000115414 Top2bQ64511 1612 aa15.51■□□□□ 0.07
Ilf3-202ENSMUST00000115414 Fgd1P52734 960 aa15.44■□□□□ 0.06
Ilf3-202ENSMUST00000115414 Rsf1E9PWW9 1441 aaKnown RBP15.44■□□□□ 0.06
Ilf3-202ENSMUST00000115414 NrdcQ8BHG1 1161 aa15.38■□□□□ 0.05
Ilf3-202ENSMUST00000115414 NacadQ5SWP3 1504 aa15.37■□□□□ 0.05
Ilf3-202ENSMUST00000115414 Eif4g1Q6NZJ6 1600 aaKnown RBP15.37■□□□□ 0.05
Ilf3-202ENSMUST00000115414 Mier1Q5UAK0 511 aa15.29■□□□□ 0.04
Ilf3-202ENSMUST00000115414 ClspnQ80YR7 1315 aa15.29■□□□□ 0.04
Ilf3-202ENSMUST00000115414 Kdm5bQ80Y84 1544 aa15.27■□□□□ 0.04
Ilf3-202ENSMUST00000115414 Golga3P55937 1487 aa15.25■□□□□ 0.03
Ilf3-202ENSMUST00000115414 Pknox2Q8BG99 474 aa15.23■□□□□ 0.03
Ilf3-202ENSMUST00000115414 Rapgef2Q8CHG7 1496 aa15.23■□□□□ 0.03
Ilf3-202ENSMUST00000115414 Ccdc88bQ4QRL3 1481 aa15.2■□□□□ 0.02
Ilf3-202ENSMUST00000115414 Ifnlr1Q8CGK5 535 aa15.19■□□□□ 0.02
Ilf3-202ENSMUST00000115414 TchhA0A0B4J1F9 1599 aa15.19■□□□□ 0.02
Ilf3-202ENSMUST00000115414 Cdk11bP24788 784 aaKnown RBP15.17■□□□□ 0.02
Ilf3-202ENSMUST00000115414 Rtl5Q5DTT4 599 aa15.15■□□□□ 0.02
Ilf3-202ENSMUST00000115414 Ncapd3Q6ZQK0 1506 aa15.14■□□□□ 0.01
Ilf3-202ENSMUST00000115414 Wdr66E9Q743 1299 aa15.14■□□□□ 0.01
Ilf3-202ENSMUST00000115414 Gab3Q8BSM5 595 aa15.12■□□□□ 0.01
Ilf3-202ENSMUST00000115414 Brd4Q9ESU6 1400 aaKnown RBP15.12■□□□□ 0.01
Ilf3-202ENSMUST00000115414 Hdac5Q9Z2V6 1113 aa15.11■□□□□ 0.01
Ilf3-202ENSMUST00000115414 Synj1Q8CHC4 1574 aa15.09■□□□□ 0.01
Ilf3-202ENSMUST00000115414 Nop58Q6DFW4 536 aaKnown RBP15.08■□□□□ 0
Ilf3-202ENSMUST00000115414 Top2aQ01320 1528 aaKnown RBP15.08■□□□□ 0
Ilf3-202ENSMUST00000115414 Sycp2Q9CUU3 1500 aa15.07■□□□□ 0
Ilf3-202ENSMUST00000115414 Aebp2Q9Z248 504 aaKnown RBP15.06■□□□□ 0
Ilf3-202ENSMUST00000115414 Fam71e1A1L3C1 212 aa15.04■□□□□ -0
Ilf3-202ENSMUST00000115414 Cttnbp2B9EJA2 1648 aa15.04■□□□□ -0
Ilf3-202ENSMUST00000115414 Cc2d2aQ8CFW7 1633 aa15□□□□□ -0.01
Ilf3-202ENSMUST00000115414 BccipQ9CWI3 316 aa14.97□□□□□ -0.01
Ilf3-202ENSMUST00000115414 Chic1Q8CBW7 227 aa14.95□□□□□ -0.02
Ilf3-202ENSMUST00000115414 Tnnt3Q9QZ47 272 aa14.95□□□□□ -0.02
Ilf3-202ENSMUST00000115414 Camsap2Q8C1B1 1461 aa14.92□□□□□ -0.02
Ilf3-202ENSMUST00000115414 Gtf3c5Q8R2T8 520 aa14.91□□□□□ -0.02
Ilf3-202ENSMUST00000115414 CftrP26361 1476 aa14.86□□□□□ -0.03
Ilf3-202ENSMUST00000115414 Gm38655A0A286YDK6 273 aa14.84□□□□□ -0.03
Ilf3-202ENSMUST00000115414 Ccdc9Q8VC31 543 aaKnown RBP14.84□□□□□ -0.03
Ilf3-202ENSMUST00000115414 Cecr2E9Q2Z1 1453 aa14.83□□□□□ -0.04
Ilf3-202ENSMUST00000115414 TnnQ80Z71 1560 aa14.83□□□□□ -0.04
Ilf3-202ENSMUST00000115414 Fmn1Q05860 1466 aa14.82□□□□□ -0.04
Ilf3-202ENSMUST00000115414 Ccdc18Q640L5 1455 aa14.82□□□□□ -0.04
Ilf3-202ENSMUST00000115414 Ppargc1bQ8VHJ7 1014 aa14.82□□□□□ -0.04
Ilf3-202ENSMUST00000115414 UbtfP25976 765 aaKnown RBP14.81□□□□□ -0.04
Ilf3-202ENSMUST00000115414 Plppr3Q7TPB0 716 aa14.8□□□□□ -0.04
Ilf3-202ENSMUST00000115414 Rpap1Q80TE0 1409 aa14.8□□□□□ -0.04
Ilf3-202ENSMUST00000115414 Cep162Q6ZQ06 1403 aa14.8□□□□□ -0.04
Ilf3-202ENSMUST00000115414 Erich3F6QRE9 1637 aa14.79□□□□□ -0.04
Ilf3-202ENSMUST00000115414 UacaQ8CGB3 1411 aa14.78□□□□□ -0.04
Ilf3-202ENSMUST00000115414 Gtf3c3Q3TMP1 882 aa14.78□□□□□ -0.04
Ilf3-202ENSMUST00000115414 Znf710Q3U288 666 aa14.77□□□□□ -0.05
Ilf3-202ENSMUST00000115414 Scaf1Q5U4C3 1256 aaKnown RBP14.75□□□□□ -0.05
Ilf3-202ENSMUST00000115414 Cul7Q8VE73 1689 aa14.74□□□□□ -0.05
Ilf3-202ENSMUST00000115414 TonslQ6NZL6 1363 aa14.74□□□□□ -0.05
Ilf3-202ENSMUST00000115414 Smarca4Q3TKT4 1613 aaKnown RBP14.73□□□□□ -0.05
Ilf3-202ENSMUST00000115414 BicraF8VPZ9 1578 aa14.72□□□□□ -0.05
Ilf3-202ENSMUST00000115414 Ipo4Q8VI75 1082 aa14.72□□□□□ -0.05
Ilf3-202ENSMUST00000115414 Hnrnpul2Q00PI9 745 aaKnown RBP14.71□□□□□ -0.05
Ilf3-202ENSMUST00000115414 Fhod3Q76LL6 1578 aa14.7□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms