RNA–Protein interactions for RNA: ENSMUST00000042205.12

Ccdc33-201, Transcript of Coiled-coil domain-containing protein 33, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ccdc33, Length 2,632 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc33-201ENSMUST00000042205 NischQ80TM9 1593 aa18.59■□□□□ 0.57
Ccdc33-201ENSMUST00000042205 Rpgrip1Q9EPQ2 1331 aa18.45■□□□□ 0.54
Ccdc33-201ENSMUST00000042205 Gm35339A0A140LHH9 1649 aa18.43■□□□□ 0.54
Ccdc33-201ENSMUST00000042205 Abcc9P70170 1546 aa18.01■□□□□ 0.47
Ccdc33-201ENSMUST00000042205 Abcc8B2RUS7 1588 aa17.77■□□□□ 0.44
Ccdc33-201ENSMUST00000042205 Pcgf6Q99NA9 353 aa17.59■□□□□ 0.41
Ccdc33-201ENSMUST00000042205 Acin1Q9JIX8 1338 aaKnown RBP17.43■□□□□ 0.38
Ccdc33-201ENSMUST00000042205 Myt1Q8CFC2 1127 aa17.25■□□□□ 0.35
Ccdc33-201ENSMUST00000042205 Las1lA2BE28 776 aaKnown RBP17.17■□□□□ 0.34
Ccdc33-201ENSMUST00000042205 CenpbP27790 599 aa17■□□□□ 0.31
Ccdc33-201ENSMUST00000042205 DiexfQ8BTT6 772 aaKnown RBP16.99■□□□□ 0.31
Ccdc33-201ENSMUST00000042205 Rtl1Q7M732 1744 aa16.96■□□□□ 0.3
Ccdc33-201ENSMUST00000042205 Rhox8Q6VSS7 320 aa16.93■□□□□ 0.3
Ccdc33-201ENSMUST00000042205 Ccdc180J3QNE4 1664 aa16.89■□□□□ 0.29
Ccdc33-201ENSMUST00000042205 Neurod1Q60867 357 aa16.88■□□□□ 0.29
Ccdc33-201ENSMUST00000042205 ScribQ80U72 1612 aa16.77■□□□□ 0.27
Ccdc33-201ENSMUST00000042205 Trim41Q5NCC3 630 aa16.74■□□□□ 0.27
Ccdc33-201ENSMUST00000042205 1700123L14RikQ3V2K7 440 aa16.69■□□□□ 0.26
Ccdc33-201ENSMUST00000042205 Supt5hO55201 1082 aaKnown RBP16.66■□□□□ 0.26
Ccdc33-201ENSMUST00000042205 Bcl11aQ9QYE3 773 aa16.59■□□□□ 0.25
Ccdc33-201ENSMUST00000042205 Dcaf1Q80TR8 1506 aa16.51■□□□□ 0.23
Ccdc33-201ENSMUST00000042205 Ehmt2Q9Z148 1263 aaKnown RBP16.39■□□□□ 0.21
Ccdc33-201ENSMUST00000042205 Kdm5dQ62240 1548 aa16.38■□□□□ 0.21
Ccdc33-201ENSMUST00000042205 Anks4bQ8K3X6 423 aa16.38■□□□□ 0.21
Ccdc33-201ENSMUST00000042205 Aplp2Q06335 707 aa16.35■□□□□ 0.21
Ccdc33-201ENSMUST00000042205 Csrnp3P59055 597 aa16.33■□□□□ 0.2
Ccdc33-201ENSMUST00000042205 NacadQ5SWP3 1504 aa16.29■□□□□ 0.2
Ccdc33-201ENSMUST00000042205 Rb1cc1Q9ESK9 1588 aa16.25■□□□□ 0.19
Ccdc33-201ENSMUST00000042205 Amer1Q7TS75 1132 aa16.22■□□□□ 0.19
Ccdc33-201ENSMUST00000042205 PrkcshO08795 521 aa16.11■□□□□ 0.17
Ccdc33-201ENSMUST00000042205 Cngb1E1AZ71 1325 aa16.1■□□□□ 0.17
Ccdc33-201ENSMUST00000042205 Baz1aO88379 1555 aa16.04■□□□□ 0.16
Ccdc33-201ENSMUST00000042205 Sycp2Q9CUU3 1500 aa15.96■□□□□ 0.15
Ccdc33-201ENSMUST00000042205 Zcchc6Q5BLK4 1491 aaKnown RBP15.93■□□□□ 0.14
Ccdc33-201ENSMUST00000042205 HrcG5E8J6 738 aa15.91■□□□□ 0.14
Ccdc33-201ENSMUST00000042205 Crybg2B7ZCC2 1516 aa15.86■□□□□ 0.13
Ccdc33-201ENSMUST00000042205 Sall2Q9QX96 1004 aa15.84■□□□□ 0.13
Ccdc33-201ENSMUST00000042205 Zeb1Q64318 1117 aa15.82■□□□□ 0.12
Ccdc33-201ENSMUST00000042205 Ccdc136Q3TVA9 1136 aa15.78■□□□□ 0.12
Ccdc33-201ENSMUST00000042205 Cdk11bP24788 784 aaKnown RBP15.73■□□□□ 0.11
Ccdc33-201ENSMUST00000042205 NefmP08553 848 aa15.72■□□□□ 0.11
Ccdc33-201ENSMUST00000042205 Fam71e1A1L3C1 212 aa15.69■□□□□ 0.1
Ccdc33-201ENSMUST00000042205 Ifnlr1Q8CGK5 535 aa15.68■□□□□ 0.1
Ccdc33-201ENSMUST00000042205 BicraF8VPZ9 1578 aa15.67■□□□□ 0.1
Ccdc33-201ENSMUST00000042205 Gm38655A0A286YDK6 273 aa15.65■□□□□ 0.1
Ccdc33-201ENSMUST00000042205 Smarca2Q6DIC0 1577 aa15.64■□□□□ 0.09
Ccdc33-201ENSMUST00000042205 Nop58Q6DFW4 536 aaKnown RBP15.6■□□□□ 0.09
Ccdc33-201ENSMUST00000042205 Rtl5Q5DTT4 599 aa15.53■□□□□ 0.08
Ccdc33-201ENSMUST00000042205 Cecr2E9Q2Z1 1453 aa15.46■□□□□ 0.07
Ccdc33-201ENSMUST00000042205 Hdac5Q9Z2V6 1113 aa15.42■□□□□ 0.06
Ccdc33-201ENSMUST00000042205 Fgd1P52734 960 aa15.41■□□□□ 0.06
Ccdc33-201ENSMUST00000042205 Pknox2Q8BG99 474 aa15.4■□□□□ 0.06
Ccdc33-201ENSMUST00000042205 NrdcQ8BHG1 1161 aa15.38■□□□□ 0.05
Ccdc33-201ENSMUST00000042205 ClspnQ80YR7 1315 aa15.34■□□□□ 0.05
Ccdc33-201ENSMUST00000042205 Tnnt3Q9QZ47 272 aa15.31■□□□□ 0.04
Ccdc33-201ENSMUST00000042205 Pelp1Q9DBD5 1123 aaKnown RBP15.31■□□□□ 0.04
Ccdc33-201ENSMUST00000042205 Wdr66E9Q743 1299 aa15.3■□□□□ 0.04
Ccdc33-201ENSMUST00000042205 Mapk8ip2Q9ERE9 830 aa15.29■□□□□ 0.04
Ccdc33-201ENSMUST00000042205 Brd4Q9ESU6 1400 aaKnown RBP15.26■□□□□ 0.03
Ccdc33-201ENSMUST00000042205 Anp32aO35381 247 aa15.25■□□□□ 0.03
Ccdc33-201ENSMUST00000042205 Mier1Q5UAK0 511 aa15.23■□□□□ 0.03
Ccdc33-201ENSMUST00000042205 SafbD3YXK2 937 aaKnown RBP15.2■□□□□ 0.02
Ccdc33-201ENSMUST00000042205 Aebp2Q9Z248 504 aaKnown RBP15.2■□□□□ 0.02
Ccdc33-201ENSMUST00000042205 Synj1Q8CHC4 1574 aa15.2■□□□□ 0.02
Ccdc33-201ENSMUST00000042205 Smarca4Q3TKT4 1613 aaKnown RBP15.16■□□□□ 0.02
Ccdc33-201ENSMUST00000042205 CftrP26361 1476 aa15.16■□□□□ 0.02
Ccdc33-201ENSMUST00000042205 Hnrnpul2Q00PI9 745 aaKnown RBP15.14■□□□□ 0.01
Ccdc33-201ENSMUST00000042205 Gtf3c3Q3TMP1 882 aa15.12■□□□□ 0.01
Ccdc33-201ENSMUST00000042205 Esf1Q3V1V3 845 aaKnown RBP15.08■□□□□ 0
Ccdc33-201ENSMUST00000042205 Ccdc9Q8VC31 543 aaKnown RBP15.07■□□□□ 0
Ccdc33-201ENSMUST00000042205 Cep164Q5DU05 1446 aa15.06■□□□□ 0
Ccdc33-201ENSMUST00000042205 Pds5bQ4VA53 1446 aaKnown RBP15.05■□□□□ -0
Ccdc33-201ENSMUST00000042205 Atad2bE9Q166 1460 aaKnown RBP15.05■□□□□ -0
Ccdc33-201ENSMUST00000042205 CatipB9EKE5 520 aa15.05■□□□□ -0
Ccdc33-201ENSMUST00000042205 Cttnbp2B9EJA2 1648 aa15.03■□□□□ -0
Ccdc33-201ENSMUST00000042205 Upf2A2AT37 1269 aaKnown RBP15.02■□□□□ -0
Ccdc33-201ENSMUST00000042205 Iqgap2Q3UQ44 1575 aa15.02□□□□□ -0.01
Ccdc33-201ENSMUST00000042205 Plcd4Q8K3R3 807 aa15□□□□□ -0.01
Ccdc33-201ENSMUST00000042205 Golga3P55937 1487 aa14.99□□□□□ -0.01
Ccdc33-201ENSMUST00000042205 Irx3P81067 507 aa14.97□□□□□ -0.01
Ccdc33-201ENSMUST00000042205 Chic1Q8CBW7 227 aa14.92□□□□□ -0.02
Ccdc33-201ENSMUST00000042205 Ipo4Q8VI75 1082 aa14.89□□□□□ -0.03
Ccdc33-201ENSMUST00000042205 Ttbk1Q6PCN3 1308 aa14.89□□□□□ -0.03
Ccdc33-201ENSMUST00000042205 Rsf1E9PWW9 1441 aaKnown RBP14.88□□□□□ -0.03
Ccdc33-201ENSMUST00000042205 Ccdc27Q3V036 639 aa14.88□□□□□ -0.03
Ccdc33-201ENSMUST00000042205 Il27Q8K3I6 234 aa14.88□□□□□ -0.03
Ccdc33-201ENSMUST00000042205 Nolc1E9Q5C9 702 aaKnown RBP14.87□□□□□ -0.03
Ccdc33-201ENSMUST00000042205 Ppargc1bQ8VHJ7 1014 aa14.87□□□□□ -0.03
Ccdc33-201ENSMUST00000042205 Supt16hQ920B9 1047 aa14.87□□□□□ -0.03
Ccdc33-201ENSMUST00000042205 Ccdc88bQ4QRL3 1481 aa14.85□□□□□ -0.03
Ccdc33-201ENSMUST00000042205 Top2bQ64511 1612 aa14.82□□□□□ -0.04
Ccdc33-201ENSMUST00000042205 Frmpd1A2AKB4 1549 aa14.81□□□□□ -0.04
Ccdc33-201ENSMUST00000042205 Wdr62Q3U3T8 1523 aa14.77□□□□□ -0.04
Ccdc33-201ENSMUST00000042205 Gtf3c5Q8R2T8 520 aa14.77□□□□□ -0.05
Ccdc33-201ENSMUST00000042205 BccipQ9CWI3 316 aa14.76□□□□□ -0.05
Ccdc33-201ENSMUST00000042205 Ercc6F8VPZ5 1481 aa14.75□□□□□ -0.05
Ccdc33-201ENSMUST00000042205 Gab3Q8BSM5 595 aa14.73□□□□□ -0.05
Ccdc33-201ENSMUST00000042205 TonslQ6NZL6 1363 aa14.73□□□□□ -0.05
Ccdc33-201ENSMUST00000042205 Cc2d2aQ8CFW7 1633 aa14.72□□□□□ -0.05
Ccdc33-201ENSMUST00000042205 Stra8P70278 393 aa14.7□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms