RNA–Protein interactions for RNA: ENSMUST00000035721.13

Prpf18-201, Transcript of Pre-mRNA-splicing factor 18, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf18, Length 3,522 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18-201ENSMUST00000035721 Ube2uB1AUC4 352 aa14.32□□□□□ -0.12
Prpf18-201ENSMUST00000035721 DiexfQ8BTT6 772 aaKnown RBP14.29□□□□□ -0.12
Prpf18-201ENSMUST00000035721 Pcgf6Q99NA9 353 aa14.24□□□□□ -0.13
Prpf18-201ENSMUST00000035721 Rpgrip1Q9EPQ2 1331 aa14.21□□□□□ -0.13
Prpf18-201ENSMUST00000035721 Myt1Q8CFC2 1127 aa14.03□□□□□ -0.16
Prpf18-201ENSMUST00000035721 Bcl11aQ9QYE3 773 aa13.87□□□□□ -0.19
Prpf18-201ENSMUST00000035721 CenpbP27790 599 aa13.84□□□□□ -0.19
Prpf18-201ENSMUST00000035721 Rhox8Q6VSS7 320 aa13.78□□□□□ -0.2
Prpf18-201ENSMUST00000035721 Ehmt2Q9Z148 1263 aaKnown RBP13.73□□□□□ -0.21
Prpf18-201ENSMUST00000035721 Amer1Q7TS75 1132 aa13.7□□□□□ -0.22
Prpf18-201ENSMUST00000035721 Ttbk1Q6PCN3 1308 aa13.7□□□□□ -0.22
Prpf18-201ENSMUST00000035721 PrkcshO08795 521 aa13.6□□□□□ -0.23
Prpf18-201ENSMUST00000035721 Las1lA2BE28 776 aaKnown RBP13.55□□□□□ -0.24
Prpf18-201ENSMUST00000035721 NischQ80TM9 1593 aa13.52□□□□□ -0.24
Prpf18-201ENSMUST00000035721 1700123L14RikQ3V2K7 440 aa13.43□□□□□ -0.26
Prpf18-201ENSMUST00000035721 Neurod1Q60867 357 aa13.38□□□□□ -0.27
Prpf18-201ENSMUST00000035721 CatipB9EKE5 520 aa13.36□□□□□ -0.27
Prpf18-201ENSMUST00000035721 Plppr3Q7TPB0 716 aa13.34□□□□□ -0.27
Prpf18-201ENSMUST00000035721 Acin1Q9JIX8 1338 aaKnown RBP13.31□□□□□ -0.28
Prpf18-201ENSMUST00000035721 Ppargc1bQ8VHJ7 1014 aa12.99□□□□□ -0.33
Prpf18-201ENSMUST00000035721 Trim41Q5NCC3 630 aa12.98□□□□□ -0.33
Prpf18-201ENSMUST00000035721 Abcc9P70170 1546 aa12.97□□□□□ -0.33
Prpf18-201ENSMUST00000035721 Ifnlr1Q8CGK5 535 aa12.97□□□□□ -0.33
Prpf18-201ENSMUST00000035721 Pknox2Q8BG99 474 aa12.96□□□□□ -0.33
Prpf18-201ENSMUST00000035721 ArxO35085 564 aa12.95□□□□□ -0.34
Prpf18-201ENSMUST00000035721 Csrnp3P59055 597 aa12.95□□□□□ -0.34
Prpf18-201ENSMUST00000035721 Aplp2Q06335 707 aa12.92□□□□□ -0.34
Prpf18-201ENSMUST00000035721 Supt5hO55201 1082 aaKnown RBP12.91□□□□□ -0.34
Prpf18-201ENSMUST00000035721 Fgd1P52734 960 aa12.88□□□□□ -0.35
Prpf18-201ENSMUST00000035721 Anks4bQ8K3X6 423 aa12.84□□□□□ -0.35
Prpf18-201ENSMUST00000035721 Gtf3c5Q8R2T8 520 aa12.81□□□□□ -0.36
Prpf18-201ENSMUST00000035721 Gm38655A0A286YDK6 273 aa12.8□□□□□ -0.36
Prpf18-201ENSMUST00000035721 NrdcQ8BHG1 1161 aa12.79□□□□□ -0.36
Prpf18-201ENSMUST00000035721 Gm35339A0A140LHH9 1649 aa12.78□□□□□ -0.36
Prpf18-201ENSMUST00000035721 Abcc8B2RUS7 1588 aa12.71□□□□□ -0.37
Prpf18-201ENSMUST00000035721 BccipQ9CWI3 316 aa12.67□□□□□ -0.38
Prpf18-201ENSMUST00000035721 Hdac5Q9Z2V6 1113 aa12.66□□□□□ -0.38
Prpf18-201ENSMUST00000035721 Kcna4Q61423 654 aa12.65□□□□□ -0.38
Prpf18-201ENSMUST00000035721 Arid3aQ62431 601 aa12.55□□□□□ -0.4
Prpf18-201ENSMUST00000035721 TimelessQ9R1X4 1197 aa12.54□□□□□ -0.4
Prpf18-201ENSMUST00000035721 Scaf1Q5U4C3 1256 aaKnown RBP12.52□□□□□ -0.4
Prpf18-201ENSMUST00000035721 HrcG5E8J6 738 aa12.46□□□□□ -0.41
Prpf18-201ENSMUST00000035721 Fam71e1A1L3C1 212 aa12.46□□□□□ -0.41
Prpf18-201ENSMUST00000035721 Cngb1E1AZ71 1325 aa12.46□□□□□ -0.41
Prpf18-201ENSMUST00000035721 Mapk8ip2Q9ERE9 830 aa12.46□□□□□ -0.42
Prpf18-201ENSMUST00000035721 Eif5bQ05D44 1216 aaKnown RBP12.42□□□□□ -0.42
Prpf18-201ENSMUST00000035721 Znf316Q6PGE4 1016 aa12.37□□□□□ -0.43
Prpf18-201ENSMUST00000035721 Zfp777B9EKF4 885 aa12.37□□□□□ -0.43
Prpf18-201ENSMUST00000035721 UbtfP25976 765 aaKnown RBP12.37□□□□□ -0.43
Prpf18-201ENSMUST00000035721 Ccdc136Q3TVA9 1136 aa12.34□□□□□ -0.43
Prpf18-201ENSMUST00000035721 Rsph4aQ8BYM7 716 aa12.33□□□□□ -0.43
Prpf18-201ENSMUST00000035721 Cdk11bP24788 784 aaKnown RBP12.32□□□□□ -0.44
Prpf18-201ENSMUST00000035721 Rtl1Q7M732 1744 aa12.3□□□□□ -0.44
Prpf18-201ENSMUST00000035721 Plcd4Q8K3R3 807 aa12.29□□□□□ -0.44
Prpf18-201ENSMUST00000035721 Q8BT18 775 aa12.29□□□□□ -0.44
Prpf18-201ENSMUST00000035721 Ccdc180J3QNE4 1664 aa12.27□□□□□ -0.44
Prpf18-201ENSMUST00000035721 Slc4a1apE9PX68 744 aa12.27□□□□□ -0.44
Prpf18-201ENSMUST00000035721 Gtf3c3Q3TMP1 882 aa12.27□□□□□ -0.45
Prpf18-201ENSMUST00000035721 Dcaf1Q80TR8 1506 aa12.26□□□□□ -0.45
Prpf18-201ENSMUST00000035721 Aebp2Q9Z248 504 aaKnown RBP12.19□□□□□ -0.46
Prpf18-201ENSMUST00000035721 Prdm10Q3UTQ7 1184 aa12.16□□□□□ -0.46
Prpf18-201ENSMUST00000035721 Rtl5Q5DTT4 599 aa12.13□□□□□ -0.47
Prpf18-201ENSMUST00000035721 Ipo4Q8VI75 1082 aa12.12□□□□□ -0.47
Prpf18-201ENSMUST00000035721 Prdm16A2A935 1275 aa12.1□□□□□ -0.47
Prpf18-201ENSMUST00000035721 Il27Q8K3I6 234 aa12.09□□□□□ -0.47
Prpf18-201ENSMUST00000035721 Sall2Q9QX96 1004 aa12.08□□□□□ -0.47
Prpf18-201ENSMUST00000035721 AampJ3QN89 436 aa12.07□□□□□ -0.48
Prpf18-201ENSMUST00000035721 Kcnn1Q9EQR3 537 aa12.03□□□□□ -0.48
Prpf18-201ENSMUST00000035721 Ube2q2Q8K2Z8 378 aa12.03□□□□□ -0.48
Prpf18-201ENSMUST00000035721 Ncbp3Q8BZR9 615 aaKnown RBP12□□□□□ -0.49
Prpf18-201ENSMUST00000035721 Rbm10Q99KG3 930 aaKnown RBP12□□□□□ -0.49
Prpf18-201ENSMUST00000035721 Irx3P81067 507 aa11.99□□□□□ -0.49
Prpf18-201ENSMUST00000035721 NgefQ8CHT1 710 aa11.99□□□□□ -0.49
Prpf18-201ENSMUST00000035721 Taok2Q6ZQ29 1240 aa11.97□□□□□ -0.49
Prpf18-201ENSMUST00000035721 Upf2A2AT37 1269 aaKnown RBP11.95□□□□□ -0.5
Prpf18-201ENSMUST00000035721 Zeb1Q64318 1117 aa11.92□□□□□ -0.5
Prpf18-201ENSMUST00000035721 Tshz2Q68FE9 1030 aa11.92□□□□□ -0.5
Prpf18-201ENSMUST00000035721 Zcchc6Q5BLK4 1491 aaKnown RBP11.89□□□□□ -0.51
Prpf18-201ENSMUST00000035721 Vgll3P85442 326 aa11.87□□□□□ -0.51
Prpf18-201ENSMUST00000035721 Ccdc9Q8VC31 543 aaKnown RBP11.87□□□□□ -0.51
Prpf18-201ENSMUST00000035721 Rtn4Q99P72 1162 aaKnown RBP11.86□□□□□ -0.51
Prpf18-201ENSMUST00000035721 SafbD3YXK2 937 aaKnown RBP11.85□□□□□ -0.51
Prpf18-201ENSMUST00000035721 Rb1cc1Q9ESK9 1588 aa11.85□□□□□ -0.51
Prpf18-201ENSMUST00000035721 Fbxo3Q9DC63 480 aa11.84□□□□□ -0.51
Prpf18-201ENSMUST00000035721 Nop58Q6DFW4 536 aaKnown RBP11.83□□□□□ -0.52
Prpf18-201ENSMUST00000035721 Samd1D3YXK1 519 aa11.82□□□□□ -0.52
Prpf18-201ENSMUST00000035721 Anp32bQ9EST5 272 aaKnown RBP11.81□□□□□ -0.52
Prpf18-201ENSMUST00000035721 Gab3Q8BSM5 595 aa11.79□□□□□ -0.52
Prpf18-201ENSMUST00000035721 Pelp1Q9DBD5 1123 aaKnown RBP11.79□□□□□ -0.52
Prpf18-201ENSMUST00000035721 Nolc1E9Q5C9 702 aaKnown RBP11.77□□□□□ -0.52
Prpf18-201ENSMUST00000035721 Chrna2Q91X60 512 aa11.77□□□□□ -0.52
Prpf18-201ENSMUST00000035721 Anp32aO35381 247 aa11.77□□□□□ -0.53
Prpf18-201ENSMUST00000035721 Chic1Q8CBW7 227 aa11.76□□□□□ -0.53
Prpf18-201ENSMUST00000035721 DmtnQ9WV69 405 aa11.74□□□□□ -0.53
Prpf18-201ENSMUST00000035721 Dnttip2Q8R2M2 758 aaKnown RBP11.74□□□□□ -0.53
Prpf18-201ENSMUST00000035721 NefmP08553 848 aa11.73□□□□□ -0.53
Prpf18-201ENSMUST00000035721 ScribQ80U72 1612 aa11.71□□□□□ -0.53
Prpf18-201ENSMUST00000035721 Wdr66E9Q743 1299 aa11.7□□□□□ -0.54
Prpf18-201ENSMUST00000035721 Znf326O88291 580 aa11.69□□□□□ -0.54
Prpf18-201ENSMUST00000035721 Hnrnpul2Q00PI9 745 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms