RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W BOI1P38041 980 aaKnown RBP2.61□□□□□ -1.99
CTF4YPR135W ESC8Q08119 714 aa2.61□□□□□ -1.99
CTF4YPR135W NUP192P47054 1683 aa2.6□□□□□ -1.99
CTF4YPR135W YHL008CP38750 627 aa2.6□□□□□ -1.99
CTF4YPR135W FIR1P40020 876 aa2.6□□□□□ -1.99
CTF4YPR135W PUN1Q06991 263 aa2.6□□□□□ -1.99
CTF4YPR135W PRP43P53131 767 aaKnown RBP2.6□□□□□ -1.99
CTF4YPR135W DUS1P53759 423 aaKnown RBP2.6□□□□□ -1.99
CTF4YPR135W DMA2P53924 522 aa2.6□□□□□ -1.99
CTF4YPR135W POM152P39685 1337 aa2.6□□□□□ -1.99
CTF4YPR135W HXT8P40886 569 aa2.59□□□□□ -1.99
CTF4YPR135W YNR065CP53751 1116 aa2.59□□□□□ -1.99
CTF4YPR135W HAS1Q03532 505 aaKnown RBP2.59□□□□□ -1.99
CTF4YPR135W KRE5P22023 1365 aa2.59□□□□□ -1.99
CTF4YPR135W RSF2P46974 1380 aa2.59□□□□□ -1.99
CTF4YPR135W MMM1P41800 426 aa2.59□□□□□ -2
CTF4YPR135W TAF1P46677 1066 aa2.59□□□□□ -2
CTF4YPR135W YJR124CP47159 448 aa2.59□□□□□ -2
CTF4YPR135W HSP78P33416 811 aa2.58□□□□□ -2
CTF4YPR135W YBR287WP38355 427 aa2.58□□□□□ -2
CTF4YPR135W RGD2P43556 714 aa2.58□□□□□ -2
CTF4YPR135W SUT1P53032 299 aaKnown RBP2.58□□□□□ -2
CTF4YPR135W CDA2Q06703 312 aa2.58□□□□□ -2
CTF4YPR135W NSI1Q12457 570 aa2.58□□□□□ -2
CTF4YPR135W RIA1P53893 1110 aa2.58□□□□□ -2
CTF4YPR135W TY3B-IQ7LHG5 1498 aaKnown RBP2.58□□□□□ -2
CTF4YPR135W GPT2P36148 743 aa2.57□□□□□ -2
CTF4YPR135W GIP4P39732 760 aa2.57□□□□□ -2
CTF4YPR135W DOT5P40553 215 aa2.57□□□□□ -2
CTF4YPR135W FAR11P53917 953 aa2.57□□□□□ -2
CTF4YPR135W YOR223WQ12015 292 aa2.57□□□□□ -2
CTF4YPR135W GLO4Q12320 285 aa2.57□□□□□ -2
CTF4YPR135W CPS1P27614 576 aa2.57□□□□□ -2
CTF4YPR135W KTR2P33550 425 aa2.57□□□□□ -2
CTF4YPR135W CIT3P43635 486 aa2.57□□□□□ -2
CTF4YPR135W YRF1-3P0CX14 1859 aa2.57□□□□□ -2
CTF4YPR135W YRF1-7P0CX15 1859 aa2.57□□□□□ -2
CTF4YPR135W YRF1-6P53819 1859 aa2.57□□□□□ -2
CTF4YPR135W TY4B-HP0C2J7 1802 aa2.56□□□□□ -2
CTF4YPR135W TY4B-JP47024 1803 aa2.56□□□□□ -2
CTF4YPR135W FET4P40988 552 aa2.56□□□□□ -2
CTF4YPR135W RCM1P53972 490 aa2.56□□□□□ -2
CTF4YPR135W SRB8P25648 1427 aa2.56□□□□□ -2
CTF4YPR135W ROM2P51862 1356 aaKnown RBP2.56□□□□□ -2
CTF4YPR135W HVG1P0CE11 249 aa2.55□□□□□ -2
CTF4YPR135W SRS2P12954 1174 aa2.55□□□□□ -2
CTF4YPR135W RPB10P22139 70 aa2.55□□□□□ -2
CTF4YPR135W PUP1P25043 261 aa2.55□□□□□ -2
CTF4YPR135W TSA1P34760 196 aaKnown RBP2.55□□□□□ -2
CTF4YPR135W NTA1P40354 457 aa2.55□□□□□ -2
CTF4YPR135W TIF6Q12522 245 aaKnown RBP2.55□□□□□ -2
CTF4YPR135W RAD55P38953 406 aa2.55□□□□□ -2
CTF4YPR135W DOT1Q04089 582 aaKnown RBP2.55□□□□□ -2
CTF4YPR135W PUF6Q04373 656 aaKnown RBP2.55□□□□□ -2
CTF4YPR135W PSK1P31374 1356 aa2.55□□□□□ -2
CTF4YPR135W PYC2P32327 1180 aaKnown RBP2.55□□□□□ -2
CTF4YPR135W OYE3P41816 400 aaPredicted RBP2.55□□□□□ -2
CTF4YPR135W ETP1P38748 585 aaKnown RBP2.54□□□□□ -2
CTF4YPR135W THI80P35202 319 aa2.54□□□□□ -2
CTF4YPR135W PSY2P40164 858 aa2.54□□□□□ -2
CTF4YPR135W EAF6P47128 113 aa2.53□□□□□ -2
CTF4YPR135W RAD9P14737 1309 aa2.53□□□□□ -2
CTF4YPR135W FLR1P38124 548 aa2.53□□□□□ -2
CTF4YPR135W APC1P53886 1748 aa2.52□□□□□ -2.01
CTF4YPR135W ADP1P25371 1049 aa2.52□□□□□ -2.01
CTF4YPR135W IRS4P36115 615 aaKnown RBP2.52□□□□□ -2.01
CTF4YPR135W YML083CQ04526 418 aa2.52□□□□□ -2.01
CTF4YPR135W YOR059CQ08448 450 aaKnown RBP2.52□□□□□ -2.01
CTF4YPR135W APC11Q12157 165 aa2.52□□□□□ -2.01
CTF4YPR135W PRP40P33203 583 aaKnown RBP2.52□□□□□ -2.01
CTF4YPR135W SSY1Q03770 852 aa2.52□□□□□ -2.01
CTF4YPR135W MSH6Q03834 1242 aa2.52□□□□□ -2.01
CTF4YPR135W PNP1Q05788 311 aa2.52□□□□□ -2.01
CTF4YPR135W RPS4AP0CX35 261 aaKnown RBP2.51□□□□□ -2.01
CTF4YPR135W RPS4BP0CX36 261 aaKnown RBP2.51□□□□□ -2.01
CTF4YPR135W AIM3P38266 947 aaKnown RBP2.51□□□□□ -2.01
CTF4YPR135W EAR1Q03212 550 aa2.51□□□□□ -2.01
CTF4YPR135W CWC15Q03772 175 aaKnown RBP2.51□□□□□ -2.01
CTF4YPR135W SPT7P35177 1332 aa2.51□□□□□ -2.01
CTF4YPR135W YEF3P16521 1044 aaKnown RBP2.51□□□□□ -2.01
CTF4YPR135W PRP45P28004 379 aaPredicted RBP2.51□□□□□ -2.01
CTF4YPR135W RRN6P32786 894 aa2.51□□□□□ -2.01
CTF4YPR135W SMC1P32908 1225 aa2.51□□□□□ -2.01
CTF4YPR135W ALG6Q12001 544 aaKnown RBP2.5□□□□□ -2.01
CTF4YPR135W LPX1Q12405 387 aaKnown RBP2.5□□□□□ -2.01
CTF4YPR135W MHP1P43638 1398 aa2.5□□□□□ -2.01
CTF4YPR135W PRO1P32264 428 aa2.5□□□□□ -2.01
CTF4YPR135W SQS1P53866 767 aaKnown RBP2.5□□□□□ -2.01
CTF4YPR135W GIS1Q03833 894 aa2.5□□□□□ -2.01
CTF4YPR135W TRE1Q08919 783 aa2.5□□□□□ -2.01
CTF4YPR135W YLL054CQ12244 843 aa2.5□□□□□ -2.01
CTF4YPR135W PRP6P19735 899 aaPredicted RBP2.49□□□□□ -2.01
CTF4YPR135W YKR075CP36155 307 aa2.49□□□□□ -2.01
CTF4YPR135W MAL31P38156 614 aa2.49□□□□□ -2.01
CTF4YPR135W MSH4P40965 878 aaPredicted RBP2.49□□□□□ -2.01
CTF4YPR135W GCV1P48015 400 aa2.49□□□□□ -2.01
CTF4YPR135W RLF2Q12495 606 aa2.49□□□□□ -2.01
CTF4YPR135W CTT1P06115 562 aa2.49□□□□□ -2.01
CTF4YPR135W ALT1P52893 592 aa2.49□□□□□ -2.01
CTF4YPR135W HDA2Q06629 674 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms