RNA–Protein interactions for RNA: YPL112C

PEX25, Transcript of Peripheral peroxisomal membrane peroxin, yeast

Gene PEX25, Length 1,185 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX25	YPL112C	GUD1	Q07729	489 aa		12.22	□□□□□ -0.45
PEX25	YPL112C	MSC6	Q08818	692 aa	Known RBP	12.22	□□□□□ -0.45
PEX25	YPL112C	MAM3	Q12296	706 aa		12.22	□□□□□ -0.45
PEX25	YPL112C	TFC8	Q12308	588 aa		12.22	□□□□□ -0.45
PEX25	YPL112C	ERP3	Q12403	225 aa		12.22	□□□□□ -0.45
PEX25	YPL112C	CIT1	P00890	479 aa		12.21	□□□□□ -0.45
PEX25	YPL112C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	12.21	□□□□□ -0.45	not detected
PEX25	YPL112C	BCS1	P32839	456 aa		12.21	□□□□□ -0.45
PEX25	YPL112C	AKR1	P39010	764 aa		12.21	□□□□□ -0.45
PEX25	YPL112C	TPM2	P40414	161 aa		12.21	□□□□□ -0.45
PEX25	YPL112C	YDR461C-A	Q2V2P7	80 aa		12.21	□□□□□ -0.45
PEX25	YPL112C	RPL8A	P17076	256 aa	Known RBP	12.2	□□□□□ -0.46
PEX25	YPL112C	YUR1	P26725	428 aa		12.2	□□□□□ -0.46
PEX25	YPL112C	FBP26	P32604	452 aa		12.2	□□□□□ -0.46
PEX25	YPL112C	VPS53	P47061	822 aa		12.2	□□□□□ -0.46
PEX25	YPL112C	YGL039W	P53183	348 aa	Known RBP	12.2	□□□□□ -0.46
PEX25	YPL112C	ECM23	Q02710	187 aa		12.2	□□□□□ -0.46
PEX25	YPL112C	MDM20	Q12387	796 aa	Known RBP	12.2	□□□□□ -0.46
PEX25	YPL112C	TRL1	P09880	827 aa	Known RBP	12.19	□□□□□ -0.46
PEX25	YPL112C	TKL1	P23254	680 aa	Known RBP	12.19	□□□□□ -0.46
PEX25	YPL112C	OXP1	P28273	1286 aa		12.19	□□□□□ -0.46
PEX25	YPL112C	UIP5	P36137	443 aa		12.19	□□□□□ -0.46
PEX25	YPL112C	LIF1	P53150	421 aa		12.19	□□□□□ -0.46
PEX25	YPL112C	ARP5	P53946	755 aa		12.19	□□□□□ -0.46
PEX25	YPL112C	YDR341C	Q05506	607 aa	Known RBP	12.19	□□□□□ -0.46
PEX25	YPL112C	HO	P09932	586 aa		12.18	□□□□□ -0.46
PEX25	YPL112C	DBP1	P24784	617 aa	Known RBP	12.18	□□□□□ -0.46
PEX25	YPL112C	PWP2	P25635	923 aa	Known RBP	12.18	□□□□□ -0.46
PEX25	YPL112C	MCM4	P30665	933 aa	Known RBP	12.18	□□□□□ -0.46
PEX25	YPL112C	REG2	P38232	338 aa		12.18	□□□□□ -0.46
PEX25	YPL112C	EPL1	P43572	832 aa		12.18	□□□□□ -0.46
PEX25	YPL112C	TFC4	P33339	1025 aa		12.17	□□□□□ -0.46
PEX25	YPL112C	KSP1	P38691	1029 aa	Known RBP	12.17	□□□□□ -0.46
PEX25	YPL112C	AIM21	P40563	679 aa		12.17	□□□□□ -0.46
PEX25	YPL112C	ASE1	P50275	885 aa		12.17	□□□□□ -0.46
PEX25	YPL112C	YMR321C	Q04898	105 aa		12.17	□□□□□ -0.46
PEX25	YPL112C	MET6	P05694	767 aa	Known RBP	12.16	□□□□□ -0.46
PEX25	YPL112C	PDC1	P06169	563 aa	Known RBP	12.16	□□□□□ -0.46
PEX25	YPL112C	DBP7	P36120	742 aa	Known RBP	12.16	□□□□□ -0.46
PEX25	YPL112C	CTR1	P49573	406 aa		12.16	□□□□□ -0.46
PEX25	YPL112C	YKE2	P52553	114 aa		12.16	□□□□□ -0.46
PEX25	YPL112C	SCS3	P53012	380 aa		12.16	□□□□□ -0.46
PEX25	YPL112C	TRM11	Q12463	433 aa		12.16	□□□□□ -0.46
PEX25	YPL112C	VPS13	Q07878	3144 aa		12.16	□□□□□ -0.46
PEX25	YPL112C	TY1B-A	O13527	1196 aa	Known RBP	12.15	□□□□□ -0.46
PEX25	YPL112C	MATALPHA2	P0CY08	210 aa		12.15	□□□□□ -0.46
PEX25	YPL112C	HMLALPHA2	P0CY09	210 aa		12.15	□□□□□ -0.46
PEX25	YPL112C	POX1	P13711	748 aa		12.15	□□□□□ -0.46
PEX25	YPL112C	STI1	P15705	589 aa	Known RBP RIP-Chip data	12.15	□□□□□ -0.46	not detected
PEX25	YPL112C	HCA4	P20448	770 aa	Known RBP	12.15	□□□□□ -0.46
PEX25	YPL112C	UGA4	P32837	571 aa		12.15	□□□□□ -0.46
PEX25	YPL112C	SEC8	P32855	1065 aa		12.15	□□□□□ -0.46
PEX25	YPL112C	NOC2	P39744	710 aa	Known RBP	12.15	□□□□□ -0.46
PEX25	YPL112C	ECM30	Q06673	1274 aa		12.15	□□□□□ -0.46
PEX25	YPL112C	ISA1	Q07821	250 aa	Predicted RBP	12.15	□□□□□ -0.46
PEX25	YPL112C	RPC31	P17890	251 aa		12.14	□□□□□ -0.47
PEX25	YPL112C	PAN5	P38787	379 aa		12.14	□□□□□ -0.47
PEX25	YPL112C	SKP2	P42843	763 aa		12.14	□□□□□ -0.47
PEX25	YPL112C	OXR1	Q08952	273 aa		12.14	□□□□□ -0.47
PEX25	YPL112C	FKS1	P38631	1876 aa	Known RBP	12.13	□□□□□ -0.47
PEX25	YPL112C	RNR2	P09938	399 aa	Known RBP	12.13	□□□□□ -0.47
PEX25	YPL112C	KTR2	P33550	425 aa		12.13	□□□□□ -0.47
PEX25	YPL112C	BMH2	P34730	273 aa	Known RBP	12.13	□□□□□ -0.47
PEX25	YPL112C	RXT2	P38255	430 aa		12.13	□□□□□ -0.47
PEX25	YPL112C	SUL1	P38359	859 aa		12.13	□□□□□ -0.47
PEX25	YPL112C	PTA1	Q01329	785 aa	Predicted RBP	12.13	□□□□□ -0.47
PEX25	YPL112C	SES1	P07284	462 aa	Known RBP	12.12	□□□□□ -0.47
PEX25	YPL112C	MAK11	P20484	414 aa	Known RBP	12.12	□□□□□ -0.47
PEX25	YPL112C	SWI4	P25302	1093 aa	Known RBP	12.12	□□□□□ -0.47
PEX25	YPL112C	TIM23	P32897	222 aa		12.12	□□□□□ -0.47
PEX25	YPL112C	GPT2	P36148	743 aa		12.12	□□□□□ -0.47
PEX25	YPL112C	CCT3	P39077	534 aa	Known RBP	12.12	□□□□□ -0.47
PEX25	YPL112C	FIR1	P40020	876 aa		12.12	□□□□□ -0.47
PEX25	YPL112C	UBP10	P53874	792 aa	Predicted RBP	12.12	□□□□□ -0.47
PEX25	YPL112C	YPL034W	Q03083	165 aa		12.12	□□□□□ -0.47
PEX25	YPL112C	YLR326W	Q06170	240 aa	Known RBP	12.12	□□□□□ -0.47
PEX25	YPL112C	PCI8	P40512	444 aa		12.11	□□□□□ -0.47
PEX25	YPL112C	GDE1	Q02979	1223 aa		12.11	□□□□□ -0.47
PEX25	YPL112C	GIS4	Q04233	774 aa		12.11	□□□□□ -0.47
PEX25	YPL112C	SMD2	Q06217	110 aa	Known RBP	12.11	□□□□□ -0.47
PEX25	YPL112C	SAS3	P34218	831 aa		12.1	□□□□□ -0.47
PEX25	YPL112C	FLR1	P38124	548 aa		12.1	□□□□□ -0.47
PEX25	YPL112C	OPY1	P38271	328 aa		12.1	□□□□□ -0.47
PEX25	YPL112C	RPN10	P38886	268 aa	Known RBP	12.1	□□□□□ -0.47
PEX25	YPL112C	CLA4	P48562	842 aa		12.1	□□□□□ -0.47
PEX25	YPL112C	MOT1	P32333	1867 aa		12.09	□□□□□ -0.47
PEX25	YPL112C	UBP15	P50101	1230 aa		12.09	□□□□□ -0.47
PEX25	YPL112C	DAK1	P54838	584 aa	Known RBP	12.09	□□□□□ -0.47
PEX25	YPL112C	YFL040W	P43562	540 aa		12.08	□□□□□ -0.48
PEX25	YPL112C	YGL138C	P53122	345 aa		12.08	□□□□□ -0.48
PEX25	YPL112C	YGR273C	P53329	174 aa		12.08	□□□□□ -0.48
PEX25	YPL112C	BNI5	P53890	448 aa	Known RBP	12.08	□□□□□ -0.48
PEX25	YPL112C	FMP30	Q02883	468 aa		12.08	□□□□□ -0.48
PEX25	YPL112C	OYE2	Q03558	400 aa	Known RBP	12.08	□□□□□ -0.48
PEX25	YPL112C	ARP6	Q12509	438 aa		12.08	□□□□□ -0.48
PEX25	YPL112C	RTP1	Q12751	981 aa		12.08	□□□□□ -0.48
PEX25	YPL112C	MAS2	P11914	482 aa		12.07	□□□□□ -0.48
PEX25	YPL112C	WHI3	P34761	661 aa	Known RBP	12.07	□□□□□ -0.48
PEX25	YPL112C	BUD6	P41697	788 aa		12.07	□□□□□ -0.48
PEX25	YPL112C	ENT3	P47160	408 aa		12.07	□□□□□ -0.48

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms