RNA–Protein interactions for RNA: YLR335W

NUP2, Transcript of Nucleoporin involved in nucleocytoplasmic transport, yeast

Gene NUP2, Length 2,163 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP2	YLR335W	YRF1-6	P53819	1859 aa		4.9	□□□□□ -1.63
NUP2	YLR335W	GLO3	P38682	493 aa	Known RBP	4.89	□□□□□ -1.63
NUP2	YLR335W	TDA3	P38758	523 aa		4.89	□□□□□ -1.63
NUP2	YLR335W	SHQ1	P40486	507 aa	Predicted RBP	4.89	□□□□□ -1.63
NUP2	YLR335W	YAP5	P40574	245 aa		4.89	□□□□□ -1.63
NUP2	YLR335W	EBS1	Q03466	884 aa	Known RBP	4.89	□□□□□ -1.63
NUP2	YLR335W	MRD1	Q06106	887 aa	Known RBP	4.89	□□□□□ -1.63
NUP2	YLR335W	YOR296W	Q08748	1289 aa		4.89	□□□□□ -1.63
NUP2	YLR335W	RRP6	Q12149	733 aa	Known RBP	4.89	□□□□□ -1.63
NUP2	YLR335W	HIS4	P00815	799 aa	Known RBP	4.89	□□□□□ -1.63
NUP2	YLR335W	COQ1	P18900	473 aa		4.89	□□□□□ -1.63
NUP2	YLR335W	SRP54	P20424	541 aa	Known RBP	4.89	□□□□□ -1.63
NUP2	YLR335W	RAM2	P29703	316 aa		4.89	□□□□□ -1.63
NUP2	YLR335W	SER1	P33330	395 aa	Known RBP	4.89	□□□□□ -1.63
NUP2	YLR335W	MIP6	P38760	659 aa	Known RBP	4.89	□□□□□ -1.63
NUP2	YLR335W	SMC2	P38989	1170 aa	Known RBP	4.89	□□□□□ -1.63
NUP2	YLR335W	UFD2	P54860	961 aa		4.89	□□□□□ -1.63
NUP2	YLR335W	TFC6	Q06339	672 aa		4.89	□□□□□ -1.63
NUP2	YLR335W	ENT1	Q12518	454 aa		4.89	□□□□□ -1.63
NUP2	YLR335W	RNR3	P21672	869 aa	Known RBP	4.88	□□□□□ -1.63
NUP2	YLR335W	CDC10	P25342	322 aa	Known RBP	4.88	□□□□□ -1.63
NUP2	YLR335W	HXT1	P32465	570 aa		4.88	□□□□□ -1.63
NUP2	YLR335W	SWI3	P32591	825 aa		4.88	□□□□□ -1.63
NUP2	YLR335W	YSW1	P38280	609 aa		4.88	□□□□□ -1.63
NUP2	YLR335W	VFA1	P40080	203 aa		4.88	□□□□□ -1.63
NUP2	YLR335W	ATG3	P40344	310 aa		4.88	□□□□□ -1.63
NUP2	YLR335W	YJR079W	P47126	109 aa		4.88	□□□□□ -1.63
NUP2	YLR335W	NGL3	Q03210	505 aa		4.88	□□□□□ -1.63
NUP2	YLR335W	POB3	Q04636	552 aa	Known RBP	4.88	□□□□□ -1.63
NUP2	YLR335W	PTC5	Q12511	572 aa		4.88	□□□□□ -1.63
NUP2	YLR335W	RMP1	Q12530	201 aa		4.88	□□□□□ -1.63
NUP2	YLR335W	ANP1	P32629	500 aa		4.88	□□□□□ -1.63
NUP2	YLR335W	SQT1	P35184	431 aa		4.88	□□□□□ -1.63
NUP2	YLR335W	SMF1	P38925	575 aa		4.88	□□□□□ -1.63
NUP2	YLR335W	VTC2	P43585	828 aa		4.88	□□□□□ -1.63
NUP2	YLR335W	MIC19	P43594	170 aa		4.88	□□□□□ -1.63
NUP2	YLR335W	VPS72	Q03388	795 aa		4.88	□□□□□ -1.63
NUP2	YLR335W	EIS1	Q05050	843 aa	Known RBP	4.88	□□□□□ -1.63
NUP2	YLR335W	YPL225W	Q08971	146 aa	Known RBP	4.88	□□□□□ -1.63
NUP2	YLR335W	DAS2	Q12084	232 aa		4.88	□□□□□ -1.63
NUP2	YLR335W	FOB1	O13329	566 aa		4.87	□□□□□ -1.63
NUP2	YLR335W	RPB2	P08518	1224 aa	Known RBP	4.87	□□□□□ -1.63
NUP2	YLR335W	RPS6A	P0CX37	236 aa	Known RBP	4.87	□□□□□ -1.63
NUP2	YLR335W	RPS6B	P0CX38	236 aa	Predicted RBP	4.87	□□□□□ -1.63
NUP2	YLR335W	OLA1	P38219	394 aa	Known RBP	4.87	□□□□□ -1.63
NUP2	YLR335W	RTS1	P38903	757 aa		4.87	□□□□□ -1.63
NUP2	YLR335W	PCI8	P40512	444 aa		4.87	□□□□□ -1.63
NUP2	YLR335W	AIP1	P46680	615 aa	Known RBP	4.87	□□□□□ -1.63
NUP2	YLR335W	TRS85	P46944	698 aa		4.87	□□□□□ -1.63
NUP2	YLR335W	SGM1	P47166	707 aa		4.87	□□□□□ -1.63
NUP2	YLR335W	SPP382	Q06411	708 aa	Predicted RBP	4.87	□□□□□ -1.63
NUP2	YLR335W	DIB1	Q06819	143 aa	Predicted RBP	4.87	□□□□□ -1.63
NUP2	YLR335W	RAD1	P06777	1100 aa		4.87	□□□□□ -1.63
NUP2	YLR335W	SPO12	P17123	173 aa		4.87	□□□□□ -1.63
NUP2	YLR335W	VPS1	P21576	704 aa	Known RBP	4.87	□□□□□ -1.63
NUP2	YLR335W	MAK31	P23059	88 aa		4.87	□□□□□ -1.63
NUP2	YLR335W	RAD57	P25301	460 aa		4.87	□□□□□ -1.63
NUP2	YLR335W	SWH1	P35845	1188 aa		4.87	□□□□□ -1.63
NUP2	YLR335W	SHM1	P37292	490 aa	Predicted RBP	4.87	□□□□□ -1.63
NUP2	YLR335W	THI6	P41835	540 aa		4.87	□□□□□ -1.63
NUP2	YLR335W	YML119W	Q03208	357 aa		4.87	□□□□□ -1.63
NUP2	YLR335W	PRP3	Q03338	469 aa	Predicted RBP	4.87	□□□□□ -1.63
NUP2	YLR335W	TOS4	Q06266	489 aa		4.87	□□□□□ -1.63
NUP2	YLR335W	RIO1	Q12196	484 aa	Known RBP	4.87	□□□□□ -1.63
NUP2	YLR335W	ECM32	P32644	1121 aa	Known RBP	4.86	□□□□□ -1.63
NUP2	YLR335W	MYO3	P36006	1272 aa		4.86	□□□□□ -1.63
NUP2	YLR335W	GRX7	P38068	203 aa		4.86	□□□□□ -1.63
NUP2	YLR335W	YMR124W	P39523	943 aa	Known RBP	4.86	□□□□□ -1.63
NUP2	YLR335W	HFM1	P51979	1187 aa		4.86	□□□□□ -1.63
NUP2	YLR335W	YGL138C	P53122	345 aa		4.86	□□□□□ -1.63
NUP2	YLR335W	VTI1	Q04338	217 aa		4.86	□□□□□ -1.63
NUP2	YLR335W	YOR223W	Q12015	292 aa		4.86	□□□□□ -1.63
NUP2	YLR335W	PSF3	Q12146	194 aa		4.86	□□□□□ -1.63
NUP2	YLR335W	NYV1	Q12255	253 aa		4.86	□□□□□ -1.63
NUP2	YLR335W	CLF1	Q12309	687 aa	Predicted RBP	4.86	□□□□□ -1.63
NUP2	YLR335W	UBP1	P25037	809 aa		4.85	□□□□□ -1.63
NUP2	YLR335W	NGR1	P32831	672 aa	Known RBP	4.85	□□□□□ -1.63
NUP2	YLR335W	UBC6	P33296	250 aa	Predicted RBP	4.85	□□□□□ -1.63
NUP2	YLR335W	BOI1	P38041	980 aa	Known RBP	4.85	□□□□□ -1.63
NUP2	YLR335W	UGA2	P38067	497 aa		4.85	□□□□□ -1.63
NUP2	YLR335W	SPP381	P38282	291 aa	Predicted RBP	4.85	□□□□□ -1.63
NUP2	YLR335W	TOM71	P38825	639 aa	Known RBP	4.85	□□□□□ -1.63
NUP2	YLR335W	YDR341C	Q05506	607 aa	Known RBP	4.85	□□□□□ -1.63
NUP2	YLR335W	SFH1	Q06168	426 aa		4.85	□□□□□ -1.63
NUP2	YLR335W	IMH1	Q06704	911 aa	Known RBP	4.85	□□□□□ -1.63
NUP2	YLR335W	ENV9	Q08651	330 aa		4.85	□□□□□ -1.63
NUP2	YLR335W	SEC39	Q12745	709 aa		4.85	□□□□□ -1.63
NUP2	YLR335W	COB	P00163	385 aa		4.85	□□□□□ -1.63
NUP2	YLR335W	PPR1	P07272	904 aa	Predicted RBP	4.85	□□□□□ -1.63
NUP2	YLR335W	THR4	P16120	514 aa	Known RBP	4.85	□□□□□ -1.63
NUP2	YLR335W	GCG1	P32656	232 aa	Known RBP	4.85	□□□□□ -1.63
NUP2	YLR335W	RAT1	Q02792	1006 aa	Known RBP	4.85	□□□□□ -1.63
NUP2	YLR335W	UME1	Q03010	460 aa		4.85	□□□□□ -1.63
NUP2	YLR335W	MYO5	Q04439	1219 aa	Known RBP	4.85	□□□□□ -1.63
NUP2	YLR335W	PSR2	Q07949	397 aa		4.85	□□□□□ -1.63
NUP2	YLR335W	YAP7	Q08182	245 aa		4.85	□□□□□ -1.63
NUP2	YLR335W	APL5	Q08951	932 aa	Known RBP	4.85	□□□□□ -1.63
NUP2	YLR335W	PUS1	Q12211	544 aa	Known RBP	4.85	□□□□□ -1.63
NUP2	YLR335W	DPH6	Q12429	685 aa		4.85	□□□□□ -1.63
NUP2	YLR335W	MET6	P05694	767 aa	Known RBP	4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms