RNA–Protein interactions for RNA: YLR243W

GPN3, Transcript of Putative GTPase with a role in biogenesis of RNA pol II and polIII, yeastyeast

Gene GPN3, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GPN3YLR243W YAR028WP39548 234 aa6.15□□□□□ -1.42
GPN3YLR243W RMD1Q03441 430 aa6.15□□□□□ -1.42
GPN3YLR243W AVO1Q08236 1176 aa6.15□□□□□ -1.42
GPN3YLR243W TRP3P00937 484 aa6.14□□□□□ -1.43
GPN3YLR243W ALT1P52893 592 aa6.14□□□□□ -1.43
GPN3YLR243W RAT1Q02792 1006 aaKnown RBP6.14□□□□□ -1.43
GPN3YLR243W EST2Q06163 884 aa6.14□□□□□ -1.43
GPN3YLR243W ADD66P36040 267 aa6.13□□□□□ -1.43
GPN3YLR243W YKR073CP36153 106 aa6.13□□□□□ -1.43
GPN3YLR243W SNU71P53207 620 aaKnown RBP6.13□□□□□ -1.43
GPN3YLR243W SIW14P53965 281 aa6.13□□□□□ -1.43
GPN3YLR243W RPS4AP0CX35 261 aaKnown RBP6.12□□□□□ -1.43
GPN3YLR243W RPS4BP0CX36 261 aaKnown RBP6.12□□□□□ -1.43
GPN3YLR243W NFS1P25374 497 aa6.12□□□□□ -1.43
GPN3YLR243W SMY2P32909 740 aaKnown RBP6.12□□□□□ -1.43
GPN3YLR243W PET112P33893 541 aa6.12□□□□□ -1.43
GPN3YLR243W KAE1P36132 386 aa6.12□□□□□ -1.43
GPN3YLR243W YGR130CP53278 816 aa6.12□□□□□ -1.43
GPN3YLR243W RSA3Q05942 220 aaKnown RBP6.12□□□□□ -1.43
GPN3YLR243W CHS2P14180 963 aa6.11□□□□□ -1.43
GPN3YLR243W YLR257WQ06146 321 aaKnown RBP6.11□□□□□ -1.43
GPN3YLR243W MKK2P32491 506 aa6.1□□□□□ -1.43
GPN3YLR243W SEA4P38164 1038 aa6.1□□□□□ -1.43
GPN3YLR243W MMM1P41800 426 aa6.1□□□□□ -1.43
GPN3YLR243W ALO1P54783 526 aaKnown RBP6.1□□□□□ -1.43
GPN3YLR243W EEB1Q02891 456 aa6.1□□□□□ -1.43
GPN3YLR243W RKM2Q03942 479 aa6.1□□□□□ -1.43
GPN3YLR243W JIP5Q06214 492 aaPredicted RBP6.1□□□□□ -1.43
GPN3YLR243W GCD1P09032 578 aaPredicted RBP6.09□□□□□ -1.43
GPN3YLR243W TAF13P11747 167 aa6.09□□□□□ -1.43
GPN3YLR243W CDC34P14682 295 aa6.09□□□□□ -1.43
GPN3YLR243W RET1P22276 1149 aaKnown RBP6.09□□□□□ -1.43
GPN3YLR243W NNK1P36003 928 aa6.09□□□□□ -1.43
GPN3YLR243W PUS7Q08647 676 aaKnown RBP6.09□□□□□ -1.43
GPN3YLR243W RTT10Q08924 1013 aa6.09□□□□□ -1.43
GPN3YLR243W RER2P35196 286 aa6.08□□□□□ -1.44
GPN3YLR243W ALG3P38179 458 aa6.08□□□□□ -1.44
GPN3YLR243W YJL045WP47052 634 aa6.08□□□□□ -1.44
GPN3YLR243W VPS16Q03308 798 aa6.08□□□□□ -1.44
GPN3YLR243W TPP1Q03796 238 aa6.08□□□□□ -1.44
GPN3YLR243W QNS1P38795 714 aaKnown RBP6.07□□□□□ -1.44
GPN3YLR243W OYE3P41816 400 aaPredicted RBP6.07□□□□□ -1.44
GPN3YLR243W CIT3P43635 486 aa6.07□□□□□ -1.44
GPN3YLR243W FAA4P47912 694 aaKnown RBP6.07□□□□□ -1.44
GPN3YLR243W SDH1Q00711 640 aa6.07□□□□□ -1.44
GPN3YLR243W YVC1Q12324 675 aa6.07□□□□□ -1.44
GPN3YLR243W CYC7P00045 113 aa6.06□□□□□ -1.44
GPN3YLR243W MSB1P21339 1137 aaKnown RBP6.06□□□□□ -1.44
GPN3YLR243W TOS1P38288 455 aa6.06□□□□□ -1.44
GPN3YLR243W MET10P39692 1035 aa6.06□□□□□ -1.44
GPN3YLR243W GPB2P39717 880 aa6.06□□□□□ -1.44
GPN3YLR243W NRD1P53617 575 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
GPN3YLR243W MAG2Q06436 670 aaKnown RBP6.06□□□□□ -1.44
GPN3YLR243W LAP2Q10740 671 aa6.06□□□□□ -1.44
GPN3YLR243W PTC5Q12511 572 aa6.06□□□□□ -1.44
GPN3YLR243W MNR2P35724 969 aa6.05□□□□□ -1.44
GPN3YLR243W ATG14P38270 344 aa6.05□□□□□ -1.44
GPN3YLR243W RCM1P53972 490 aa6.05□□□□□ -1.44
GPN3YLR243W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
GPN3YLR243W TRP2P00899 507 aaKnown RBP6.04□□□□□ -1.44
GPN3YLR243W SYP1P25623 870 aaKnown RBP6.04□□□□□ -1.44
GPN3YLR243W KIP1P28742 1111 aa6.04□□□□□ -1.44
GPN3YLR243W HSE1P38753 452 aa6.04□□□□□ -1.44
GPN3YLR243W ENT3P47160 408 aa6.04□□□□□ -1.44
GPN3YLR243W CTH1P47976 325 aa6.04□□□□□ -1.44
GPN3YLR243W INP52P50942 1183 aa6.04□□□□□ -1.44
GPN3YLR243W TIF35Q04067 274 aaKnown RBP6.04□□□□□ -1.44
GPN3YLR243W SVF1Q05515 481 aa6.04□□□□□ -1.44
GPN3YLR243W AOS1Q06624 347 aa6.04□□□□□ -1.44
GPN3YLR243W MED7Q08278 222 aa6.04□□□□□ -1.44
GPN3YLR243W PIN2Q12057 282 aa6.04□□□□□ -1.44
GPN3YLR243W MOT2P34909 587 aaKnown RBP6.03□□□□□ -1.44
GPN3YLR243W VPS53P47061 822 aa6.03□□□□□ -1.44
GPN3YLR243W ESC2Q06340 456 aa6.03□□□□□ -1.44
GPN3YLR243W DBP5P20449 482 aaKnown RBP6.02□□□□□ -1.45
GPN3YLR243W MAC1P35192 417 aa6.02□□□□□ -1.45
GPN3YLR243W PEX7P39108 375 aa6.02□□□□□ -1.45
GPN3YLR243W MPH1P40562 993 aa6.02□□□□□ -1.45
GPN3YLR243W MAD1P40957 749 aa6.02□□□□□ -1.45
GPN3YLR243W YFL054CP43549 646 aa6.02□□□□□ -1.45
GPN3YLR243W ALD6P54115 500 aaKnown RBP6.02□□□□□ -1.45
GPN3YLR243W GDE1Q02979 1223 aa6.02□□□□□ -1.45
GPN3YLR243W RCL1Q08096 367 aaPredicted RBP6.02□□□□□ -1.45
GPN3YLR243W HRK1Q08732 759 aaKnown RBP6.02□□□□□ -1.45
GPN3YLR243W SAM35P14693 329 aa6.01□□□□□ -1.45
GPN3YLR243W PUF4P25339 888 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
GPN3YLR243W RAD27P26793 382 aa6.01□□□□□ -1.45
GPN3YLR243W MLS1P30952 554 aa6.01□□□□□ -1.45
GPN3YLR243W OMA1P36163 345 aa6.01□□□□□ -1.45
GPN3YLR243W CNN1P43618 361 aa6.01□□□□□ -1.45
GPN3YLR243W YGR053CP53234 283 aa6.01□□□□□ -1.45
GPN3YLR243W YPL066WQ12194 479 aa6.01□□□□□ -1.45
GPN3YLR243W LYP1P32487 611 aa6□□□□□ -1.45
GPN3YLR243W TMA46Q12000 345 aaKnown RBP6□□□□□ -1.45
GPN3YLR243W SPO21Q12411 609 aa6□□□□□ -1.45
GPN3YLR243W YER152CP10356 443 aa5.99□□□□□ -1.45
GPN3YLR243W CLN2P20438 545 aa5.99□□□□□ -1.45
GPN3YLR243W PUB1P32588 453 aaKnown RBP RIP-Chip data5.99□□□□□ -1.45not detected
GPN3YLR243W YKL069WP36088 180 aa5.99□□□□□ -1.45
GPN3YLR243W YHL012WP38709 493 aa5.99□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms